Query gi|254780813|ref|YP_003065226.1| Maf-like protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 199
No_of_seqs 107 out of 3404
Neff 6.6
Searched_HMMs 13730
Date Wed Jun 1 06:02:05 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780813.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ex2a_ c.51.4.2 (A:) Maf prot 100.0 0 0 391.6 15.4 185 1-195 1-185 (185)
2 d2amha1 c.51.4.2 (A:7-207) Maf 100.0 0 0 365.9 13.0 185 2-195 3-201 (201)
3 d2cara1 c.51.4.1 (A:1-194) Ino 91.6 0.25 1.8E-05 26.4 6.2 104 1-118 6-122 (194)
4 d1v7ra_ c.51.4.1 (A:) XTP pyro 91.2 0.49 3.6E-05 24.6 7.8 104 4-121 2-118 (186)
5 d1b78a_ c.51.4.1 (A:) XTP pyro 89.0 0.45 3.3E-05 24.9 5.6 103 4-121 1-117 (184)
6 d1k7ka_ c.51.4.1 (A:) Hypothet 84.5 1.3 9.6E-05 22.0 8.9 103 2-118 13-138 (209)
7 d1pdaa1 c.94.1.1 (A:3-219) Por 73.3 1.6 0.00012 21.5 3.5 13 48-60 60-72 (217)
8 d1vp2a_ c.51.4.1 (A:) Putative 43.8 9.9 0.00072 16.5 9.0 105 3-118 2-119 (189)
9 d1nd9a_ a.6.1.6 (A:) N-termina 24.4 14 0.00099 15.7 1.3 21 177-197 8-28 (49)
10 d1xm7a_ d.159.1.8 (A:) Hypothe 22.5 18 0.0013 15.0 1.6 34 76-110 44-77 (188)
No 1
>d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=0 Score=391.55 Aligned_cols=185 Identities=30% Similarity=0.476 Sum_probs=176.1
Q ss_pred CCCCEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf 98754742699899999997898859975898843242201344579989998887654333210137754034134431
Q gi|254780813|r 1 MIKNIILASSSLSRRKLLQNSGIQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGCDQTM 80 (199)
Q Consensus 1 m~~~iILAS~S~~R~~lL~~~gi~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~aDtvv 80 (199)
|+++|||||+||||++||+++|++|+++||++||+..+. .+|.+++.++|+.||++++..+|+.+||||||||
T Consensus 1 M~~~iILAS~SprR~~lL~~~gi~f~v~~~~idE~~~~~-------~~p~~~v~~lA~~KA~~v~~~~~~~~vi~aDtvv 73 (185)
T d1ex2a_ 1 MTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRN-------FSPEENVQWLAKQKAKAVADLHPHAIVIGADTMV 73 (185)
T ss_dssp CCCCEEECCCCHHHHHHHHTTCCCCEECCCCCCCCCCTT-------SCHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 999889977899999999868999899799988776779-------9979999999998898654030010121242110
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 01234467610013469999985198037888665303786100468741100122205789999962068867332100
Q gi|254780813|r 81 SLGSSIYHKPVDMLEAEKNLLRISGKKHRISSAYVLVQNGKVLRHHISVAQLTMYKLSEEFIKFYLNKIGKKALLSVGSY 160 (199)
Q Consensus 81 ~~~g~i~~KP~~~~eA~~~L~~lsg~~h~v~T~~~i~~~~~~~~~~~~~t~v~f~~l~~~~I~~Yi~~~~~~~~~~aG~y 160 (199)
+++|+|+|||.|+++|++||+.|||++|.|+||+|+..+++ .+.++++|.|+|+++++++|++||++ ++|++|||||
T Consensus 74 ~~~~~i~~KP~~~~~A~~~L~~lsg~~h~v~T~v~v~~~~~-~~~~~~~t~v~f~~ls~~~I~~Yi~~--~e~~~kAG~y 150 (185)
T d1ex2a_ 74 CLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENH-SETFYDKTEVAFWSLSEEEIWTYIET--KEPMDKAGAY 150 (185)
T ss_dssp EETTEEECCCSSHHHHHHHHHHHTTSEEEEEEEEEEEETTE-EEEEEEEEEEEECCCCHHHHHHHHTT--TSGGGSTTSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC-CCEECCEEEEEECCCCHHHHHHHHCC--CCHHHHHHHE
T ss_conf 24654467521267789999985156662302322102333-30204147997057879999987502--1056541001
Q ss_pred CCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 00122332100011897532227699999999978
Q gi|254780813|r 161 QIDKEGIQLFSSIKGSYFSIVGLPIIELINDLKIE 195 (199)
Q Consensus 161 ~ie~~g~~~i~~I~Gd~~~V~GLPi~~l~~~L~~~ 195 (199)
+|||.|..||++|+|||+||||||+.+|+++|++|
T Consensus 151 ~ie~~g~~~i~~I~Gd~~~VvGLPl~~l~~~L~~f 185 (185)
T d1ex2a_ 151 GIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF 185 (185)
T ss_dssp CSSGGGGGTEEEEESCHHHHHTCCHHHHHHHHTTC
T ss_pred EECCCHHHCEEEEECCCCCCCCCCHHHHHHHHHCC
T ss_conf 21455531864458895311188899999999649
No 2
>d2amha1 c.51.4.2 (A:7-207) Maf homologue Tb11.01.5890 {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00 E-value=0 Score=365.90 Aligned_cols=185 Identities=18% Similarity=0.288 Sum_probs=169.1
Q ss_pred CCCEEECCCCHHHHHHHHHCC----CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-------
Q ss_conf 875474269989999999789----885997589884324220134457998999888765433321013775-------
Q gi|254780813|r 2 IKNIILASSSLSRRKLLQNSG----IQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPE------- 70 (199)
Q Consensus 2 ~~~iILAS~S~~R~~lL~~~g----i~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~------- 70 (199)
|++|||||+||||++||+++| ++|+++||+|||++++. ..|.+++.++|..||.++...+++
T Consensus 3 ~k~lILAS~S~rR~~lL~~~g~~~~~~f~v~~~~idE~~~~~-------~~p~~~~~~lA~~Ka~~v~~~~~~~~~~~~~ 75 (201)
T d2amha1 3 IRTMIIGTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRA-------ADPFELTESIARAKMKAVLEKARQHSPPISG 75 (201)
T ss_dssp CCEEEECCCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCC-------SSHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred CCCEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 771999059999999998669767877799699989898765-------7978999999998777654233331013467
Q ss_pred -CCEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECC-CCCCCEEEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf -403413443101234467610013469999985198037888665303-786100468741100122205789999962
Q gi|254780813|r 71 -SFVIGCDQTMSLGSSIYHKPVDMLEAEKNLLRISGKKHRISSAYVLVQ-NGKVLRHHISVAQLTMYKLSEEFIKFYLNK 148 (199)
Q Consensus 71 -~~VI~aDtvv~~~g~i~~KP~~~~eA~~~L~~lsg~~h~v~T~~~i~~-~~~~~~~~~~~t~v~f~~l~~~~I~~Yi~~ 148 (199)
.+||||||||+++|+|+|||.|+++|++||+.|||++|+|+||+|++. ++..+|.++++|+|+|+++++++|++||++
T Consensus 76 ~~ivi~aDtvv~~~g~i~~KP~~~~~A~~~L~~lsg~~h~v~T~v~v~~~~~~~~~~~~~~t~v~f~~ls~~~I~~Yl~~ 155 (201)
T d2amha1 76 PAIALTFDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTVATYALCVVGTENVLVAHNETETFFSKFGDDIVERTLER 155 (201)
T ss_dssp CEEEEEEEEEEEETTEEECSCSSHHHHHHHHHHHTTSEEEEEEEEEEEETTCSCEEEEEEEEEEEECCCCHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCHHHHHHHHHC
T ss_conf 62999613310113321267200004678899864786389999999968985899999989998760888999989632
Q ss_pred CCCCCCCCCCEECCCCCHH-HHHHEECCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 0688673321000012233-2100011897532227699999999978
Q gi|254780813|r 149 IGKKALLSVGSYQIDKEGI-QLFSSIKGSYFSIVGLPIIELINDLKIE 195 (199)
Q Consensus 149 ~~~~~~~~aG~y~ie~~g~-~~i~~I~Gd~~~V~GLPi~~l~~~L~~~ 195 (199)
++|++|||||+|||.|+ .||++|+|||+||||||+..+.++|++.
T Consensus 156 --~~~~~kAG~y~ieg~g~~~fi~~I~G~~~~V~GLP~~~~~~ll~~l 201 (201)
T d2amha1 156 --GACMNSAGGLVVEDEDMSRHVVRIVGTSYGVRGMEPAVVEKLLSQL 201 (201)
T ss_dssp --CGGGGSGGGCCTTSHHHHTTEEEEESCHHHHHTCCHHHHHHHHHTC
T ss_pred --CCCCCEEEEEEEEECCHHHCEEEEECCCCCEECCCHHHHHHHHHHC
T ss_conf --8877500899997073221562222792021588999999999709
No 3
>d2cara1 c.51.4.1 (A:1-194) Inosine triphosphate pyrophosphatase, ITPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.63 E-value=0.25 Score=26.42 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=55.7
Q ss_pred CCCCEEECCCCHHH----HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 98754742699899----99999789885997589884324220134457998999888765433321013775403413
Q gi|254780813|r 1 MIKNIILASSSLSR----RKLLQNSGIQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGC 76 (199)
Q Consensus 1 m~~~iILAS~S~~R----~~lL~~~gi~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~a 76 (199)
+.++|++||+-+.. +++|... ......+.++|-... +.++. ..|..||+.+.... +..+|+-
T Consensus 6 ~~kkI~~aT~N~~K~~E~~~lL~~~-~~~~~~~~~~d~~E~--------~~~~~----enA~~KA~~~~~~~-~~pviaD 71 (194)
T d2cara1 6 VGKKIVFVTGNAKKLEEVVQILGDK-FPCTLVAQKIDLPEY--------QGEPD----EISIQKCQEAVRQV-QGPVLVE 71 (194)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHCTT-CCSEEEEECCCCCCB--------CSCHH----HHHHHHHHHHHHHH-SSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CCEEECHHCCCCCCC--------CCCHH----HHHHHHHHHHHHHH-HHEEEEC
T ss_conf 7997999849989999999973050-773313200699876--------78607----88887767776643-2105742
Q ss_pred HHHHCCC---CC--CCCCCC-HHHHHHHHHHHH---CCCCEEEEEEEEECC
Q ss_conf 4431012---34--467610-013469999985---198037888665303
Q gi|254780813|r 77 DQTMSLG---SS--IYHKPV-DMLEAEKNLLRI---SGKKHRISSAYVLVQ 118 (199)
Q Consensus 77 Dtvv~~~---g~--i~~KP~-~~~eA~~~L~~l---sg~~h~v~T~~~i~~ 118 (199)
||=+.++ |. ++.+-- +.......++.+ .+++.+..+.+|+..
T Consensus 72 DSGL~VdaL~g~PGvysar~~~~~~~~~l~~~l~~~~~r~a~~~~~~~l~~ 122 (194)
T d2cara1 72 DTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALST 122 (194)
T ss_dssp EEEEEEGGGTTCEETTHHHHHHHHHHHHHHHTTTTCSCCEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEEEEEE
T ss_conf 201046756523078889999863603666774066420004678899971
No 4
>d1v7ra_ c.51.4.1 (A:) XTP pyrophosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.21 E-value=0.49 Score=24.64 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=56.4
Q ss_pred CEEECCCCHHHH----HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHH
Q ss_conf 547426998999----9999789885997589884324220134457998999888765433321013775403413443
Q gi|254780813|r 4 NIILASSSLSRR----KLLQNSGIQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGCDQT 79 (199)
Q Consensus 4 ~iILAS~S~~R~----~lL~~~gi~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~aDtv 79 (199)
+|++||+-+... +||..++++......++.|.. ..+. ...|..||..+..... ..+|+-||=
T Consensus 2 Ki~~aT~N~~K~~E~~~lL~~~~i~v~~~~~~~~e~~---------~~~~----~~~a~~ka~~~~~~~~-~p~laDDSG 67 (186)
T d1v7ra_ 2 KIFFITSNPGKVREVANFLGTFGIEIVQLKHEYPEIQ---------AEKL----EDVVDFGISWLKGKVP-EPFMIEDSG 67 (186)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCEEEEECCCCCCCC---------CSSH----HHHHHHHHHHHTTTSC-SSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC---------CCCH----HHHHHHHHHHHHHHCC-CEEEECCCE
T ss_conf 7999889888999999975055976986576676545---------5317----7899999999874323-016705210
Q ss_pred HCC---CCC--CCCCC-CHHHHHHHHHHHHCC---CCEEEEEEEEECCCCC
Q ss_conf 101---234--46761-001346999998519---8037888665303786
Q gi|254780813|r 80 MSL---GSS--IYHKP-VDMLEAEKNLLRISG---KKHRISSAYVLVQNGK 121 (199)
Q Consensus 80 v~~---~g~--i~~KP-~~~~eA~~~L~~lsg---~~h~v~T~~~i~~~~~ 121 (199)
+++ +|. ++.+- .+.......++.+.| ++..+.+.+++..++.
T Consensus 68 L~vdaL~g~PGi~sar~~~~~~~~~l~~~l~~~~~r~a~~~~~~~~~~~~~ 118 (186)
T d1v7ra_ 68 LFIESLKGFPGVYSSYVYRTIGLEGILKLMEGAEDRRAYFKSVIGFYIDGK 118 (186)
T ss_dssp EEEGGGTTTBGGGHHHHHHHTHHHHHHHHTTTCSCCEEEEEEEEEEEETTE
T ss_pred EEHHHHCCCCCCCCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
T ss_conf 205443687654257777502388999997351677888875320137983
No 5
>d1b78a_ c.51.4.1 (A:) XTP pyrophosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.02 E-value=0.45 Score=24.89 Aligned_cols=103 Identities=18% Similarity=0.077 Sum_probs=54.8
Q ss_pred CEEECCCCHHHHH----HHHHCCC-CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHH
Q ss_conf 5474269989999----9997898-8599758988432422013445799899988876543332101377540341344
Q gi|254780813|r 4 NIILASSSLSRRK----LLQNSGI-QFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGCDQ 78 (199)
Q Consensus 4 ~iILAS~S~~R~~----lL~~~gi-~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~aDt 78 (199)
+|++||+-+...+ +|..+++ .......++.|. +.+.. ..|..||+.+.+... ..+|+-||
T Consensus 1 KI~~aT~N~~K~~E~~~ll~~~~~~~~~~~~~~~pE~----------~~t~~----enA~~Ka~~~~~~~~-~pviaDDS 65 (184)
T d1b78a_ 1 KIYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEI----------QGTLE----EVAEFGAKWVYNILK-KPVIVEDS 65 (184)
T ss_dssp CEEEECSCHHHHHHHHHHTTTCTTCCEEEECCCCCCB----------SSCHH----HHHHHHHHHHHHHHC-SCEEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCC----------CCCHH----HHHHHHHHHHCCCCC-CEEEEECC
T ss_conf 9999948888999999987557875303237688644----------66322----435544432103443-03885063
Q ss_pred HHCC---CCC--CCCCC----CHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
Q ss_conf 3101---234--46761----0013469999985198037888665303786
Q gi|254780813|r 79 TMSL---GSS--IYHKP----VDMLEAEKNLLRISGKKHRISSAYVLVQNGK 121 (199)
Q Consensus 79 vv~~---~g~--i~~KP----~~~~eA~~~L~~lsg~~h~v~T~~~i~~~~~ 121 (199)
=..+ +|. ++.|. .+.+...++|.....+..++.+.+++..++.
T Consensus 66 GL~v~aL~g~PGi~s~~~~~~~~~~~ll~~l~~~~~r~a~~~~~~~~~~~~~ 117 (184)
T d1b78a_ 66 GFFVEALNGFPGTYSKFVQETIGNEGILKLLEGKDNRNAYFKTVIGYCDENG 117 (184)
T ss_dssp EEEEGGGTTCEETTHHHHHHHTHHHHHHHHHTTCSCCEEEEEEEEEEEETTE
T ss_pred EEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7873123311431118776410257899887665416666500100013685
No 6
>d1k7ka_ c.51.4.1 (A:) Hypothetical protein YggV {Escherichia coli [TaxId: 562]}
Probab=84.47 E-value=1.3 Score=21.97 Aligned_cols=103 Identities=21% Similarity=0.323 Sum_probs=54.9
Q ss_pred CCCEEECCCCHHHH----HHHHHCCCCCEEEC-C--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 87547426998999----99997898859975-8--98843242201344579989998887654333210137754034
Q gi|254780813|r 2 IKNIILASSSLSRR----KLLQNSGIQFSVVK-P--NIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVI 74 (199)
Q Consensus 2 ~~~iILAS~S~~R~----~lL~~~gi~f~~~~-~--~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI 74 (199)
|++|++||+-+.-. ++|..+++ ++++ . ++||-+ + .+.+. ...|..||+..... .+..||
T Consensus 13 M~kI~~aT~N~~K~~E~~~iL~~~~i--~v~~~~~~~i~e~e---E----~g~t~----~enA~~KA~~~~~~-~~~pvl 78 (209)
T d1k7ka_ 13 MQKVVLATGNVGKVRELASLLSDFGL--DIVAQTDLGVDSAE---E----TGLTF----IENAILKARHAAKV-TALPAI 78 (209)
T ss_dssp CEEEEESCCCHHHHHHHHHHHGGGTE--EEEETTTTTCCCCC---C----CCSSH----HHHHHHHHHHHHHH-HSSCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCC--EEEEHHHCCCCCHH---H----CCHHH----HHHHHHHHHHHHHC-CCCCCE
T ss_conf 87899993988899999997512597--79854660998633---3----04067----77777888776531-468743
Q ss_pred CHHHHHC---CCCC--CCCCC-----C-HHHHHHHHHHHHCC-----CCEEEEEEEEECC
Q ss_conf 1344310---1234--46761-----0-01346999998519-----8037888665303
Q gi|254780813|r 75 GCDQTMS---LGSS--IYHKP-----V-DMLEAEKNLLRISG-----KKHRISSAYVLVQ 118 (199)
Q Consensus 75 ~aDtvv~---~~g~--i~~KP-----~-~~~eA~~~L~~lsg-----~~h~v~T~~~i~~ 118 (199)
+-||=+. ++|. ++.|. . +.+.....|..+.+ ++-+..+.++++.
T Consensus 79 ~DDsGL~idaL~g~PGvys~r~~~~~~~~~~~~~~~l~~~~~~~~~~r~a~f~~~~~~~~ 138 (209)
T d1k7ka_ 79 ADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLR 138 (209)
T ss_dssp EEEEEEEEGGGTTCBGGGSTTTTCTTCCHHHHHHHHHHHTTTSCGGGCEEEEEEEEEEES
T ss_pred ECCCEEEHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEEC
T ss_conf 314167643343876775443541368788999987766515765566342178999843
No 7
>d1pdaa1 c.94.1.1 (A:3-219) Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=73.27 E-value=1.6 Score=21.48 Aligned_cols=13 Identities=15% Similarity=0.286 Sum_probs=5.1
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 9899988876543
Q gi|254780813|r 48 RPEKIALILAEKK 60 (199)
Q Consensus 48 ~p~~~~~~lA~~K 60 (199)
-..++-..|-..+
T Consensus 60 Ftkele~~Ll~~~ 72 (217)
T d1pdaa1 60 FVKELEVALLENR 72 (217)
T ss_dssp TTHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999997076
No 8
>d1vp2a_ c.51.4.1 (A:) Putative inosine/xanthosine triphosphate pyrophosphatase TM0159 {Thermotoga maritima [TaxId: 2336]}
Probab=43.83 E-value=9.9 Score=16.54 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=56.4
Q ss_pred CCEEECCCCHHHHHHHHH-CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHC
Q ss_conf 754742699899999997-8988599758988432422013445799899988876543332101377540341344310
Q gi|254780813|r 3 KNIILASSSLSRRKLLQN-SGIQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGCDQTMS 81 (199)
Q Consensus 3 ~~iILAS~S~~R~~lL~~-~gi~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~aDtvv~ 81 (199)
++|++||+-+--.+=++. ++..+.+++..-+-+. + + .+.+. ...|..||+.+.+... ..+|+-||=+.
T Consensus 2 m~I~~aT~N~~K~~E~~~il~~~~~i~~~~~~~e~-~-E----~~~t~----~enA~~KA~~~~~~~~-~pvlaDDSGL~ 70 (189)
T d1vp2a_ 2 LTVYLATTNPHKVEEIKMIAPEWMEILPSPEKIEV-V-E----DGETF----LENSVKKAVVYGKKLK-HPVMADDSGLV 70 (189)
T ss_dssp EEEEESCCCHHHHHHHHTTCCTTEEEEECSSCCCC-C-C----CCSSH----HHHHHHHHHHHHHHHC-SCEEEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCC-C-C----CCCCH----HHHHHHHHHHHCCCCC-CEEEEECCEEE
T ss_conf 59999869878999999982169888225544776-6-6----78358----9888876654303344-23886153788
Q ss_pred ---CCCC--CCCC----C-CHHHHHHHHHHHHCCC--CEEEEEEEEECC
Q ss_conf ---1234--4676----1-0013469999985198--037888665303
Q gi|254780813|r 82 ---LGSS--IYHK----P-VDMLEAEKNLLRISGK--KHRISSAYVLVQ 118 (199)
Q Consensus 82 ---~~g~--i~~K----P-~~~~eA~~~L~~lsg~--~h~v~T~~~i~~ 118 (199)
++|. ++.| + .+.......++.+.+. +....+.++++.
T Consensus 71 v~aL~g~PGvysar~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 119 (189)
T d1vp2a_ 71 IYSLGGFPGVMSARFMEEHSYKEKMRTILKMLEGKDRRAAFVCSATFFD 119 (189)
T ss_dssp EGGGTTEEGGGTTTTTTTSCHHHHHHHHHHHTTTSCCEEEEEEEEEEEE
T ss_pred EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEE
T ss_conf 5212444567889997515420567899874236555522145787652
No 9
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=24.37 E-value=14 Score=15.70 Aligned_cols=21 Identities=5% Similarity=0.026 Sum_probs=13.3
Q ss_pred CCCCCCCCHHHHHHHHHHCCC
Q ss_conf 753222769999999997898
Q gi|254780813|r 177 YFSIVGLPIIELINDLKIEKV 197 (199)
Q Consensus 177 ~~~V~GLPi~~l~~~L~~~gi 197 (199)
+...+|.|+-.|++.|++.|+
T Consensus 8 lA~~v~~~vd~Ll~Ql~~AGl 28 (49)
T d1nd9a_ 8 LAAERQTSVERLVQQFADAGI 28 (49)
T ss_dssp HHHHHSSSHHHHHHHHHHHTS
T ss_pred HHHHHCCCHHHHHHHHHHCCC
T ss_conf 999989599999999998389
No 10
>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}
Probab=22.53 E-value=18 Score=14.98 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=21.6
Q ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 34431012344676100134699999851980378
Q gi|254780813|r 76 CDQTMSLGSSIYHKPVDMLEAEKNLLRISGKKHRI 110 (199)
Q Consensus 76 aDtvv~~~g~i~~KP~~~~eA~~~L~~lsg~~h~v 110 (199)
.|+|+.+++-.+ .+.+.+++.+.|..|.|+.|.|
T Consensus 44 ~D~v~~LGD~~~-~~~~~~~~~~~l~~L~g~~~lI 77 (188)
T d1xm7a_ 44 EDTLYHLGDFTW-HFNDKNEYLRIWKALPGRKILV 77 (188)
T ss_dssp TCEEEECSCCBS-CSCCTTSHHHHHHHSSSEEEEE
T ss_pred CCEEEEECCCCC-CCCCHHHHHHHHHHCCCCEEEE
T ss_conf 988999488413-5787899999999779965998
Done!