HHsearch alignment for GI: 254780814 and conserved domain: COG1389

>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair].
Probab=99.34  E-value=1.9e-10  Score=100.30  Aligned_cols=185  Identities=22%  Similarity=0.293  Sum_probs=128.9

Q ss_pred             CEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCEEEEEECCC----CEEEEEECCCCCCCCCCC
Q ss_conf             123135420004587154327996325445656755578868-607797579998389----839999768445364077
Q gi|254780814|r   15 IQILKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDES-LEGYADIITVTLNMD----GSCTVSDNGRGIPTDLHK   89 (803)
Q Consensus        15 i~~L~gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~-~~g~~~~I~V~i~~d----gsisV~dnGrGIPv~~h~   89 (803)
T Consensus        12 ~re~SvAEFF~kNk~ml-Gf~~p~RsL~~tv~ElV~NSLDA~eeaGILPdI~v~I~~~~~d~y~v~veDNGpGIP~e~IP   90 (538)
T COG1389          12 FRELSVAEFFRKNKEML-GFDGPIRSLTTTVHELVTNSLDACEEAGILPDIKVEIERIGKDHYKVIVEDNGPGIPEEQIP   90 (538)
T ss_pred             HHHCCHHHHHHHCHHHC-CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHH
T ss_conf             33269999987488861-89973068999999998531656876088876599998547755899993489999856757


Q ss_pred             CCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEE-----EEEEEEC--CEEEEEEEECCEECCCCEEE
Q ss_conf             7885001256425011323289860483116752037786326449-----9999978--95999998898364631387
Q gi|254780814|r   90 EEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWL-----KLRIKRE--GNIYEMSFINGILDNPLVVT  162 (803)
Q Consensus        90 ~~~~~~~E~i~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~-----~v~v~rd--gk~~~q~f~~g~~~~~l~~~  162 (803)
T Consensus        91 --------kvFGk~LygSKfh~--~~QsRGqqGiGis~avLysQmTtGkPv~V~s~T~~s~~~~~~~l~id~~kNEp~Iv  160 (538)
T COG1389          91 --------KVFGKMLYGSKFHR--NIQSRGQQGIGISAAVLYSQMTTGKPVRVISSTGDSGTAYEYELKIDVQKNEPEIV  160 (538)
T ss_pred             --------HHHHHHHCCCHHHH--HHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHE
T ss_conf             --------89988860232323--44325532424789999987517986699953788862489999951788876200


Q ss_pred             -----CCCCCCCCEEEEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEC
Q ss_conf             -----327788870899987788854210008999999997311464169999963
Q gi|254780814|r  163 -----GSAGNDTGTEVTFLPSSDIFSVQDFNYDTLQHRLRELSFLNSSVQISLIDK  213 (803)
Q Consensus       163 -----~~~~~~~GT~I~F~PD~~iF~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~De  213 (803)
T Consensus       161 ~r~~~~~~~~~hGT~Vel~~~~~~~~~~~q---gi~eYlkrTaiinPhA~I~l~dP  213 (538)
T COG1389         161 ERGEVENPGGWHGTRVELELKGVWYRAKRQ---GIYEYLKRTAIINPHARIVLKDP  213 (538)
T ss_pred             ECCCCCCCCCCCCEEEEEEECCCCHHHCCC---CHHHHHHHHHHCCCCEEEEEECC
T ss_conf             002224788877507999955530542224---79999988753387417999889