HHsearch alignment for GI: 254780814 and conserved domain: COG3850

>COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms].
Probab=96.04  E-value=0.015  Score=38.90  Aligned_cols=17  Identities=24%  Similarity=0.307  Sum_probs=8.1

Q ss_pred             CCCCCCEEEEEEECCCC
Q ss_conf             44567059999951853
Q gi|254780814|r  656 SINNSDILVKRIARGVQ  672 (803)
Q Consensus       656 ~~~~~~i~~~~~~~Gv~  672 (803)
T Consensus       507 ~~~~g~~~~~VeDnG~G  523 (574)
T COG3850         507 SQNDGQVTLTVEDNGVG  523 (574)
T ss_pred             EECCCEEEEEEEECCCC
T ss_conf             86596489999428837