HHsearch alignment for GI: 254780814 and conserved domain: COG3920

Probab=96.12  E-value=0.0083  Score=40.91  Aligned_cols=94  Identities=26%  Similarity=0.373  Sum_probs=61.0

Q ss_pred             CEECCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCEEEEEECC--CC---EEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf             154327996325445656755578868-60779757999838--98---3999976844536407778850012564250
Q gi|254780814|r   30 MYIGDTDGESGLHHMIYEVLDNAIDES-LEGYADIITVTLNM--DG---SCTVSDNGRGIPTDLHKEEGISAAEVIMTRL  103 (803)
Q Consensus        30 mYiG~t~~~~Gl~hlv~EiidNsvDe~-~~g~~~~I~V~i~~--dg---sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L  103 (803)
T Consensus       113 ~~l~~-d~A~~Lgliv~EL~tNa~Khaf~~~~~G~I~I~~~~~~~~~~~~l~v~deg~G~~~~~~~--------------  177 (221)
T COG3920         113 VFLDP-DTAVPLGLIVHELVTNALKHAFLSRPGGEIRITLSREGDGGRFLLTVWDEGGGPPVEAPL--------------  177 (221)
T ss_pred             EEECH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCC--------------
T ss_conf             22673-678899999999999889861788899779999998479971799998789898888887--------------


Q ss_pred             CCCCCCCCCCCEEECCCCCCEEEEEEECC-CEEEE--EEE-ECCEEEEEEEECC
Q ss_conf             11323289860483116752037786326-44999--999-7895999998898
Q gi|254780814|r  104 HAGGKFNQKSYKVSGGLHGVGVSVVNALS-SWLKL--RIK-REGNIYEMSFING  153 (803)
Q Consensus       104 ~ag~kfd~~~yk~sgGlhGvG~s~vNalS-~~~~v--~v~-rdgk~~~q~f~~g  153 (803)
T Consensus       178 ---------------~~~g~G~~Lv~~lv~~q~~g~~~~~~~~Gt~~~i~~~~~  216 (221)
T COG3920         178 ---------------SRGGFGLQLVERLVPEQLGGELEDERPDGTEFRLRFPLS  216 (221)
T ss_pred             ---------------CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECC
T ss_conf             ---------------899837999999999967972799749977999998864