HHsearch alignment for GI: 254780814 and conserved domain: KOG1978
>KOG1978 consensus.
Probab=97.47 E-value=0.00059 Score=49.84 Aligned_cols=170 Identities=21% Similarity=0.322 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCC---CCCC
Q ss_conf 63254456567555788686077975799983898--399997684453640777885001256425011323---2898
Q gi|254780814|r 38 ESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDG--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGK---FNQK 112 (803)
Q Consensus 38 ~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dg--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~k---fd~~ 112 (803)
T Consensus 18 I~sl~sAVKELvENSiDA----GAT~I~I~~kdyG~d~IEV~DNG~GI~~~n~~--~-------l~lkh~TSKi~~f~Dl 84 (672)
T KOG1978 18 ITSLVSAVKELVENSIDA----GATAIDIKVKDYGSDSIEVSDNGSGISATDFE--G-------LALKHTTSKIVSFADL 84 (672)
T ss_pred ECCHHHHHHHHHHCCCCC----CCCEEEEECCCCCCCEEEEECCCCCCCCCCHH--H-------HHHHHHHHCCCCHHHH
T ss_conf 215899999998637034----77525575378774328980488887733103--4-------4434544133012324
Q ss_pred CCEEECCCCCCEEEEEEECCCEEEEEEEECC-EEEEEEEEC-CEECCCCEEECCCCCCCCEEEEEEECHHHHHH------
Q ss_conf 6048311675203778632644999999789-599999889-83646313873277888708999877888542------
Q gi|254780814|r 113 SYKVSGGLHGVGVSVVNALSSWLKLRIKREG-NIYEMSFIN-GILDNPLVVTGSAGNDTGTEVTFLPSSDIFSV------ 184 (803)
Q Consensus 113 ~yk~sgGlhGvG~s~vNalS~~~~v~v~rdg-k~~~q~f~~-g~~~~~l~~~~~~~~~~GT~I~F~PD~~iF~~------ 184 (803)
T Consensus 85 ~~l~T~GFRGEALSsLCa~~dv~I~Trt~~~~vgt~l~~Dh~G~I----~~k~~~ar~~GTTV~v~---~LF~tLPVR~k 157 (672)
T KOG1978 85 AVLFTLGFRGEALSSLCALGDVMISTRSHSAKVGTRLVYDHDGHI----IQKKPVARGRGTTVMVR---QLFSTLPVRRK 157 (672)
T ss_pred HHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCE----EEEECCCCCCCCEEEHH---HHCCCCCCCHH
T ss_conf 444231246777763664165279986226754226887157863----44301257788778786---53146998668
Q ss_pred -----HHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCC
Q ss_conf -----10008999999997311464169999963586421010012688
Q gi|254780814|r 185 -----QDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKGG 228 (803)
Q Consensus 185 -----~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~~~G 228 (803)
T Consensus 158 ef~r~~Kref~k~i~li~~y~li~~~ir~~~~n~t~~~~k~i-il~t~~ 205 (672)
T KOG1978 158 EFQRNIKRKFVKLISLIQAYALISTAIKFLVSNSTLAGKKNI-ILKTGG 205 (672)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE-EEECCC
T ss_conf 750114555666666677787631211013440134577405-773388