HHsearch alignment for GI: 254780814 and conserved domain: pfam00986
>pfam00986 DNA_gyraseB_C DNA gyrase B subunit, carboxyl terminus. The amino terminus of eukaryotic and prokaryotic DNA topoisomerase II are similar, but they have a different carboxyl terminus. The amino-terminal portion of the DNA gyrase B protein is thought to catalyse the ATP-dependent super-coiling of DNA. See pfam00204. The carboxyl-terminal end supports the complexation with the DNA gyrase A protein and the ATP-independent relaxation. This family also contains Topoisomerase IV. This is a bacterial enzyme that is closely related to DNA gyrase,.
Probab=99.94 E-value=3.6e-28 Score=237.81 Aligned_cols=64 Identities=64% Similarity=1.132 Sum_probs=62.6
Q ss_pred HHCCCEEEECCCCCCCCHHHHHHCCCCHHHCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 3067628603777788955722303896134021236798898887865641899876289988
Q gi|254780814|r 730 GRKGISMQRYKGLGEMNASQLWETTLNPDTRSLLRVKITDASQADDLFSRLMGDEVEPRREFIQ 793 (803)
Q Consensus 730 gkKG~sIQRYKGLGEMNPeQLWETTMDP~tRtLLqV~IeDa~~Ad~iF~~LMGD~VEPRReFIe 793 (803)
T Consensus 2 ~~~k~~I~RfKGLGEM~p~qL~eTTmdp~~R~L~~V~~~d~~~~~~~~~~LMG~~~~~R~~~I~ 65 (65)
T pfam00986 2 GNKKVEIQRFKGLGEMNPEQLWETTMDPETRRLLQVTIEDAEEADEMFSTLMGKDVEPRREFIE 65 (65)
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHCCCHHCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCC
T ss_conf 9887535753576779999999873383106789886388899999999983999689897639