HHsearch alignment for GI: 254780814 and conserved domain: pfam02518
>pfam02518 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.
Probab=97.63 E-value=1.7e-05 Score=61.87 Aligned_cols=87 Identities=39% Similarity=0.511 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC---CEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC
Q ss_conf 6325445656755578868607797579998389---8399997684453640777885001256425011323289860
Q gi|254780814|r 38 ESGLHHMIYEVLDNAIDESLEGYADIITVTLNMD---GSCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSY 114 (803)
Q Consensus 38 ~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~d---gsisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~kfd~~~y 114 (803)
T Consensus 3 ~~~l~~i~~nll~NAik~~~~~--~~I~i~~~~~~~~~~i~V~D~G~Gi~~~~~--------~~if~~f~~~~~---~~~ 69 (111)
T pfam02518 3 EDRLRQVLSNLLDNAIKHAPAG--GEIEVTLERDGGRLRITVEDNGIGIPPEDL--------PKIFEPFFRTDK---DSR 69 (111)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC--CEEEEEEEEECCEEEEEEEECCCCCCHHHH--------HHHCCCCEECCC---CCC
T ss_conf 8999999999999999977999--759999999599999999989999598999--------887499177799---997
Q ss_pred EEECCCCCCEEEEEEECCCEEEEEE
Q ss_conf 4831167520377863264499999
Q gi|254780814|r 115 KVSGGLHGVGVSVVNALSSWLKLRI 139 (803)
Q Consensus 115 k~sgGlhGvG~s~vNalS~~~~v~v 139 (803)
T Consensus 70 ~~-~g-~GlGL~i~~~~~~~~~g~i 92 (111)
T pfam02518 70 KV-GG-TGLGLSIVRKLVELHGGTI 92 (111)
T ss_pred CC-CC-CCHHHHHHHHHHHHCCCEE
T ss_conf 77-97-7647999999999879989