HHsearch results for GI: 254780814 and protein with PDBid: 1s16_A
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=100.00 E-value=0 Score=905.83 Aligned_cols=385 Identities=36% Similarity=0.619 Sum_probs=361.6
Q ss_pred CCCHHHCEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCC
Q ss_conf 67865512313542000458715432799632544565675557886860779757999838983999976844536407
Q gi|254780814|r 9 SYDADSIQILKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTDLH 88 (803)
Q Consensus 9 ~Y~~~~i~~L~gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dgsisV~dnGrGIPv~~h 88 (803)
+|+|++|++|+|||||||||||||||| |||||+||||||||||+++|||+.|+|+|++||+|||+||||||||++|
T Consensus 4 ~y~~~~i~~L~~lE~Vr~RP~mYiGs~----gl~~~~~EildNavDe~~~~~~~~I~V~i~~dg~isV~dnGrGIPv~~h 79 (390)
T 1s16_A 4 TYNADAIEVLTGLEPVRRRPGMYTDTT----RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIH 79 (390)
T ss_dssp CCSGGGCEECCTTHHHHHCGGGTSCTT----STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCEEEEECSSCCCCSBC
T ss_pred CCCHHHCEEECCCHHHHCCCCCEECCC----CCCEEEEEEEECCHHHHHCCCCCEEEEEECCCCEEEEEECCCCEEECCC
T ss_conf 638645846145237653896678999----8520786998746506742999679999918986999988995000456
Q ss_pred CCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCEECCCCEEECCCC-C
Q ss_conf 778850012564250113232898604831167520377863264499999978959999988983646313873277-8
Q gi|254780814|r 89 KEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAG-N 167 (803)
Q Consensus 89 ~~~~~~~~E~i~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk~~~q~f~~g~~~~~l~~~~~~~-~ 167 (803)
|++++|+||||||+||||||||+++|++||||||||||||||||+||+|+|+|+|++|.|+|++|++..+++.++.+. +
T Consensus 80 ~~~~~~~~elif~~L~tg~nfd~~~~k~sgG~nGvGakl~NalS~~f~v~v~~~~~~~~q~f~~g~~~~~~~~i~~~~~~ 159 (390)
T 1s16_A 80 PEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKR 159 (390)
T ss_dssp TTTCSBHHHHHHHCTTEESCSSSSSCSSCSCCSSCHHHHHHHTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEECCTT
T ss_pred CCCCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCEEEEEECCCEEEEEEEECCEEEEEEECCCCCCCCCEEEECCCCC
T ss_conf 56687713888987603676788774230675762458989624107999986467689996399745672176145778
Q ss_pred CCCEEEEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCC
Q ss_conf 88708999877888542100089999999973114641699999635864210100126883577653003565568852
Q gi|254780814|r 168 DTGTEVTFLPSSDIFSVQDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRHKKPLMQSP 247 (803)
Q Consensus 168 ~~GT~I~F~PD~~iF~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~~~Gi~~fv~~l~~~~~~~~~~~ 247 (803)
++||+|+|+||+++|++..|++++|..|++++|||+||+++.+.|++.. ....|+|++|+.+|+.+++.++.++++.+
T Consensus 160 ~~gT~ItF~PD~~~F~~~~~~~~~i~~~~k~~a~l~~gl~i~~~~~~~~--~~~~~~~~~Gi~~y~~~~~~~~~~~~~~~ 237 (390)
T 1s16_A 160 NTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINN--TEQRWCYQDGLNDYLAEAVNGLPTLPEKP 237 (390)
T ss_dssp CCEEEEEEEECGGGSSCCSCCHHHHHHHHHHHHHHSTTCEEEEEETTTT--EEEEECCSSCHHHHHHHHHTTSCCEEEEE
T ss_pred CCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHEEECCCCEEEEEECCCC--EEEEEEECCCHHHHHHHHHCCCCCCCCCC
T ss_conf 9968999994868704423269999999987528868955788751687--06777604867677888725898655663
Q ss_pred EEEEEEEEEEEEEEEEEECC-CCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC
Q ss_conf 03642003699973345317-75412122224621666772103568889999999998624200012357613430572
Q gi|254780814|r 248 IRIQGSRDNISIDLAMRWND-GYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGF 326 (803)
Q Consensus 248 i~~~~~~~~~~veval~~~~-~~~e~i~SfvN~I~T~~GGtHv~gf~~al~~~i~~y~~~~~~~Kk~k~~~~~~Diregl 326 (803)
++.....++..|||+++|++ ++.+.++||||+|+|++|||||+||+.||+++|++|+++.++.|+ +.+++++|||+||
T Consensus 238 ~~~~~~~~~~~ve~~~~~~~~~~~~~~~SFvN~I~T~~GGtHv~~~~~~l~~~i~~~~~~~~~~kk-~~~i~~~di~~~l 316 (390)
T 1s16_A 238 FIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPR-GVKLSAEDIWDRC 316 (390)
T ss_dssp EEEEEECSSEEEEEEEEECTTCCCCCEEEEETTEECTTCBHHHHHHHHHHHHHHHHHHHHTTCSCT-TCCCCHHHHHTTE
T ss_pred EEEEECCCCCEEEEEEEECCCCCCEEEEEEECCEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCHHHHHCCE
T ss_conf 587760677259999986143443034444343766899475230799999999999997174445-6747854653776
Q ss_pred EEEEEEECCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 1566652137633572100202611110321110268999987400357999877899988775545532110011
Q gi|254780814|r 327 TSVLSIKMPDPRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLDASMVRDAARRARDLTRRK 402 (803)
Q Consensus 327 ~~visvki~nP~F~gQTK~kL~s~~v~~~v~~~v~~~l~~~l~~n~~~ak~i~~k~~~a~~ar~~a~kar~~~rrK 402 (803)
++||||+|+||+|+||||++|+|++++..|+..++++|..||++||..|+.|+++++.+|++|. +++|+++|||
T Consensus 317 ~~~vs~~i~nP~F~sQTKekL~s~~~~~~v~~~v~~~~~~~l~~n~~~a~~I~~k~i~~a~~r~--~~~k~~~RkK 390 (390)
T 1s16_A 317 AYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRM--RAAKKVVRKK 390 (390)
T ss_dssp EEEEEEEESSCCBSSTTCCCBCCTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH--HHC-------
T ss_pred EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHHHHHHCCC
T ss_conf 9999998479960771117306976888899999999999999797999999999999999999--9767875379