HHsearch results for GI: 254780814 and protein with PDBid: 1yc1_A
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=97.17 E-value=0.0011 Score=46.20 Aligned_cols=143 Identities=18% Similarity=0.205 Sum_probs=79.4
Q ss_pred HHHHHHHHHHH-------HH-------CCCCEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCEEEEEEEEE-CCCCC-
Q ss_conf 56755578868-------60-------7797579998389-83999976844536407778850012564250-11323-
Q gi|254780814|r 46 YEVLDNAIDES-------LE-------GYADIITVTLNMD-GSCTVSDNGRGIPTDLHKEEGISAAEVIMTRL-HAGGK- 108 (803)
Q Consensus 46 ~EiidNsvDe~-------~~-------g~~~~I~V~i~~d-gsisV~dnGrGIPv~~h~~~~~~~~E~i~t~L-~ag~k- 108 (803)
-|+|.||+|-. +. +..-.|.|..+.+ ++++|.|||-|+--+.-. --|++. .+|.+
T Consensus 74 RELIsNAsDAi~k~r~~~~~~~~~~~~~~~~~I~i~~d~~~~tl~I~DnGiGMt~~el~--------~~lgtIa~Sg~~~ 145 (264)
T 1yc1_A 74 RELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLI--------NNLGTIAKSGTKA 145 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGGGGCCCCCEEEEEETTTTEEEEEECSCCCCHHHHH--------HHHHSCTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHH--------HHCCCHHCCCCHH
T ss_conf 88885799999999998653952246798736999876888889999689877799999--------7616500146388
Q ss_pred C----CCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCE-EEEEEEECCEECCCCEEECCCCCCCCEEEEEEECHHHHH
Q ss_conf 2----89860483116752037786326449999997895-999998898364631387327788870899987788854
Q gi|254780814|r 109 F----NQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGN-IYEMSFINGILDNPLVVTGSAGNDTGTEVTFLPSSDIFS 183 (803)
Q Consensus 109 f----d~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk-~~~q~f~~g~~~~~l~~~~~~~~~~GT~I~F~PD~~iF~ 183 (803)
| ......---|.-|||.-.+=..+.+.+|.++..+. .+.-.|..+. .............+||+|+..+..+-
T Consensus 146 f~~~~~~~~d~~~IGqFGVGFyS~FMVAdkV~V~Trs~~~~~~~w~s~~~g-~~~~~~~~~~~~~~GT~I~L~Lk~d~-- 222 (264)
T 1yc1_A 146 FMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGG-SFTVRTDTGEPMGRGTKVILHLKEDQ-- 222 (264)
T ss_dssp HHHHHHTTCCGGGGGGGTCGGGGHHHHEEEEEEEEECTTSCCEEEEECSTT-EEEEEECCSSCCSSEEEEEEEECGGG--
T ss_pred HHHHHHHCCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEECC-CEEEEECCCCCCCCCCEEEEEECCCH--
T ss_conf 898754025644000015221220234775799975899864437864068-72799677788999948999968872--
Q ss_pred HHHC-CHHHHHHHHHHHH
Q ss_conf 2100-0899999999731
Q gi|254780814|r 184 VQDF-NYDTLQHRLRELS 200 (803)
Q Consensus 184 ~~~~-~~d~l~~R~~~~A 200 (803)
.+| +.+.|...++..+
T Consensus 223 -~Efle~~rl~~lIkkYS 239 (264)
T 1yc1_A 223 -TEYLEERRIKEIVKKHS 239 (264)
T ss_dssp -GGGGSHHHHHHHHHHHT
T ss_pred -HHHCCHHHHHHHHHHHH
T ss_conf -78669989999999876