HHsearch results for GI: 254780814 and protein with PDBid: 3fv5_A
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=100.00 E-value=0 Score=542.31 Aligned_cols=200 Identities=44% Similarity=0.767 Sum_probs=191.1
Q ss_pred CCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 54200045871543279963254456567555788686077975799983898399997684453640777885001256
Q gi|254780814|r 20 GLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTDLHKEEGISAAEVI 99 (803)
Q Consensus 20 gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dgsisV~dnGrGIPv~~h~~~~~~~~E~i 99 (803)
|||||||||||||||| |||||+||||||||||+++|||+.|.|+++.||||||+||||||||++||++++|+||+|
T Consensus 1 glE~Vr~RPgMYiGs~----gl~hl~~EildNaiDe~~~g~~~~i~v~~~~d~sitV~d~GrGIPv~~h~~~~~~~~e~i 76 (201)
T 3fv5_A 1 GLEPVRRRPGMYTDTT----RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELI 76 (201)
T ss_dssp CCHHHHHCGGGTSCTT----STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCEEEEECSSCCCCSBCTTCSSBHHHHH
T ss_pred CCHHHHCCCCCEECCC----CCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEEE
T ss_conf 9567621897268998----877078688881354875489837999991898099999789646858677897145999
Q ss_pred EEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCEECCCCEEECCCC-CCCCEEEEEEEC
Q ss_conf 4250113232898604831167520377863264499999978959999988983646313873277-888708999877
Q gi|254780814|r 100 MTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAG-NDTGTEVTFLPS 178 (803)
Q Consensus 100 ~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk~~~q~f~~g~~~~~l~~~~~~~-~~~GT~I~F~PD 178 (803)
||+||||||||+++|++||||||||+|||||||++|+|+|+|+|++|+|+|++|++..+++.++.+. +++||+|+|+||
T Consensus 77 ~t~l~ag~~fd~~~~k~sgG~~GvG~~~vNalS~~~~v~v~r~g~~~~q~f~~g~~~~~~~~i~~~~~~~~gT~I~F~PD 156 (201)
T 3fv5_A 77 LCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPD 156 (201)
T ss_dssp HHCC---------------------CHHHHHTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECC
T ss_conf 99970357678876411377576052344765161699994189899999839930676348741467898499999788
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECC
Q ss_conf 88854210008999999997311464169999963586421010012
Q gi|254780814|r 179 SDIFSVQDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFY 225 (803)
Q Consensus 179 ~~iF~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~ 225 (803)
+++|++..|++++|.+|++++|||||||+|+|+|||.++ +.+|||
T Consensus 157 ~~iF~~~~~~~d~l~~rl~~~A~L~~Gl~i~~~Der~~~--~~~f~y 201 (201)
T 3fv5_A 157 ETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNT--EQRWCY 201 (201)
T ss_dssp GGGSSCCCCCHHHHHHHHHHHHHHSTTCEEEEEETTTTE--EEEECC
T ss_pred HHHCCCCEECHHHHHHHHHHHHCCCCCCEEEEEECCCCC--EEEEEC
T ss_conf 432375589799999999999604799789999847896--888889