Query gi|254780815|ref|YP_003065228.1| hypothetical protein CLIBASIA_03530 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 232
No_of_seqs 133 out of 925
Neff 7.9
Searched_HMMs 33803
Date Wed Jun 1 13:33:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780815.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2cw9_A Translocase of inner m 100.0 1.5E-37 4.4E-42 258.2 13.7 157 75-231 29-188 (194)
2 >2fxt_A Import inner membrane 100.0 7.3E-34 2.2E-38 234.7 14.6 153 79-231 19-179 (179)
3 >3k7c_A Putative NTF2-like tra 95.4 0.093 2.8E-06 30.7 7.5 96 109-226 11-112 (114)
4 >1vqq_A Saupbp2A, penicillin-b 94.2 0.21 6.3E-06 28.4 6.9 98 104-226 1-104 (110)
5 >3cnx_A Uncharacterized protei 93.9 0.46 1.4E-05 26.3 13.6 111 106-229 13-152 (170)
6 >3h3h_A Uncharacterized snoal- 90.4 1.2 3.7E-05 23.5 7.0 89 106-210 9-120 (122)
7 >3ksp_A Calcium/calmodulin-dep 90.0 1.3 3.9E-05 23.3 7.0 105 107-230 11-123 (129)
8 >2owp_A Hypothetical protein B 86.0 2.2 6.5E-05 21.9 5.7 104 104-230 10-123 (129)
9 >2r4i_A Uncharacterized protei 85.1 2.6 7.7E-05 21.5 8.6 100 108-230 9-119 (123)
10 >3fsd_A NTF2-like protein of u 82.1 3.5 0.0001 20.7 9.1 103 107-230 16-130 (134)
11 >2a15_A Hypothetical protein R 81.6 2.2 6.6E-05 21.9 4.2 28 107-134 9-36 (139)
12 >3ebt_A Uncharacterized NTF2-l 81.5 2.3 6.7E-05 21.9 4.2 88 106-213 4-110 (132)
13 >2q8n_A Glucose-6-phosphate is 78.9 2.2 6.6E-05 21.9 3.5 43 84-126 43-85 (126)
14 >3f14_A Uncharacterized NTF2-l 74.5 5.8 0.00017 19.3 5.3 29 106-134 1-29 (112)
15 >3gzr_A Uncharacterized protei 72.8 6.4 0.00019 19.0 7.4 107 107-229 8-126 (146)
16 >1f07_A Coenzyme F420-dependen 72.8 4.5 0.00013 20.0 3.7 30 110-139 40-69 (75)
17 >2f86_B Hypothetical protein K 72.4 6.5 0.00019 18.9 8.6 108 104-229 11-129 (143)
18 >2ux0_A Calcium-calmodulin dep 69.7 7.5 0.00022 18.6 11.0 31 104-134 12-42 (143)
19 >1tuh_A BAL32A, hypothetical p 68.7 7.8 0.00023 18.4 5.1 30 105-134 29-58 (156)
20 >3bb9_A Putative orphan protei 65.0 9.3 0.00027 18.0 8.2 101 108-230 33-147 (148)
21 >1z1s_A Hypothetical protein P 64.8 9.3 0.00028 18.0 5.2 27 108-134 26-52 (163)
22 >3ke7_A Putative ketosteroid i 64.0 9.7 0.00029 17.9 7.6 100 108-228 17-125 (134)
23 >3gwr_A Putative calcium/calmo 63.1 10 0.0003 17.8 10.0 100 108-229 11-124 (144)
24 >2rfr_A Uncharacterized protei 60.9 11 0.00032 17.5 7.1 108 105-229 19-138 (155)
25 >1ezw_A Coenzyme F420-dependen 59.9 9.4 0.00028 17.9 3.3 29 111-139 40-68 (87)
26 >3f9s_A Putative polyketide cy 59.5 12 0.00034 17.4 6.1 69 108-184 10-94 (146)
27 >3cu3_A Domain of unknown func 59.2 12 0.00035 17.3 5.5 104 107-229 18-134 (139)
28 >1s5a_A Hypothetical protein Y 58.9 12 0.00035 17.3 5.0 32 103-134 8-39 (150)
29 >3ff2_A Uncharacterized cystat 57.5 3.2 9.6E-05 20.9 0.5 28 107-134 4-31 (117)
30 >3f7s_A Uncharacterized NTF2-l 57.3 13 0.00037 17.1 10.1 102 107-229 10-124 (127)
31 >3fh1_A Uncharacterized NTF2-l 51.9 4.4 0.00013 20.0 0.5 28 107-134 19-46 (129)
32 >2k54_A Protein ATU0742; prote 51.9 7.4 0.00022 18.6 1.7 29 106-134 4-32 (123)
33 >3d9r_A Ketosteroid isomerase- 51.0 16 0.00047 16.5 12.5 105 106-228 12-128 (135)
34 >3ff0_A Phenazine biosynthesis 50.9 16 0.00047 16.5 6.3 31 104-134 17-47 (163)
35 >3ec9_A Uncharacterized NTF2-l 47.1 18 0.00054 16.1 6.5 29 107-135 14-42 (140)
36 >3fka_A Uncharacterized NTF-2 46.1 19 0.00056 16.0 9.1 90 108-228 12-115 (120)
37 >3b7c_A Uncharacterized protei 46.0 19 0.00056 16.0 9.3 29 106-134 6-34 (122)
38 >3fgy_A Uncharacterized NTF2-l 45.3 20 0.00058 15.9 8.0 89 106-213 6-110 (135)
39 >1nww_A Limonene-1,2-epoxide h 42.8 12 0.00035 17.3 1.6 28 107-134 24-51 (149)
40 >2gey_A ACLR protein; alpha+be 42.2 22 0.00064 15.6 7.1 29 106-134 5-33 (134)
41 >1oh0_A Steroid delta-isomeras 42.1 13 0.00039 17.0 1.7 29 106-134 8-36 (131)
42 >3f40_A Uncharacterized NTF2-l 41.0 13 0.00039 17.0 1.5 27 108-134 9-35 (114)
43 >1ohp_A Steroid delta-isomeras 40.5 13 0.00039 17.0 1.4 29 106-134 6-34 (125)
44 >3en8_A Uncharacterized NTF-2 40.4 23 0.00069 15.4 7.5 29 106-134 6-34 (128)
45 >2bng_A MB2760; epoxide hydrol 39.7 11 0.00032 17.5 0.9 31 104-134 14-44 (149)
46 >3f7x_A Putative polyketide cy 37.6 10 0.00031 17.7 0.6 28 107-134 22-49 (151)
47 >3i0y_A Putative polyketide cy 37.5 12 0.00036 17.2 0.9 29 106-134 9-37 (140)
48 >2gex_A SNOL; alpha+beta barre 37.0 26 0.00077 15.1 10.0 30 105-134 4-33 (152)
49 >3g0k_A Putative membrane prot 35.6 28 0.00082 15.0 6.8 58 99-156 22-89 (148)
50 >3dm8_A Uncharacterized protei 35.4 28 0.00082 15.0 7.7 28 107-134 6-33 (143)
51 >3blz_A NTF2-like protein of u 35.1 28 0.00083 14.9 7.0 93 106-228 13-120 (128)
52 >3duk_A NTF2-like protein of u 35.0 28 0.00083 14.9 6.9 91 107-228 14-119 (125)
53 >1puo_A Major allergen I polyp 34.7 25 0.00074 15.2 2.2 24 107-130 38-61 (81)
54 >3dmc_A NTF2-like protein; YP_ 33.6 30 0.00088 14.8 9.2 31 104-134 11-41 (134)
55 >3k0z_A Putative polyketide cy 33.3 30 0.00089 14.7 4.7 30 105-134 34-63 (159)
56 >1sjw_A Nogalonic acid methyl 32.2 4.5 0.00013 19.9 -2.0 30 105-134 2-31 (144)
57 >3h51_A Putative calcium/calmo 31.9 32 0.00094 14.6 10.7 101 108-229 23-136 (156)
58 >2chc_A Protein RV3472; hypoth 31.8 32 0.00094 14.6 10.7 99 106-228 15-127 (170)
59 >3ehc_A Snoal-like polyketide 30.9 8.5 0.00025 18.2 -0.8 28 107-134 5-32 (128)
60 >3g8z_A Protein of unknown fun 30.5 33 0.00099 14.4 9.7 28 107-134 22-49 (148)
61 >2epl_X N-acetyl-beta-D-glucos 29.9 34 0.001 14.4 3.7 49 83-132 44-101 (201)
62 >1ka2_A M32 carboxypeptidase; 29.8 21 0.00063 15.7 1.1 36 101-136 106-141 (174)
63 >1sr2_A Putative sensor-like h 28.9 36 0.0011 14.3 2.9 32 100-131 37-68 (116)
64 >3dwc_A TCMCP-1, metallocarbox 28.0 37 0.0011 14.2 2.4 36 101-136 47-84 (121)
65 >3hk4_A MLR7391 protein; NP_10 28.0 37 0.0011 14.2 6.4 88 108-214 23-126 (136)
66 >2f99_A Aklanonic acid methyl 27.8 10 0.0003 17.7 -0.8 29 106-134 12-40 (153)
67 >3f8x_A Putative delta-5-3-ket 25.2 12 0.00036 17.2 -0.8 28 107-134 22-49 (148)
68 >1zkr_A Major allergen I polyp 25.1 40 0.0012 13.9 1.9 19 106-124 58-76 (77)
69 >3hq2_A Bacillus subtilis M32 25.0 27 0.00079 15.1 0.9 36 101-136 134-169 (187)
70 >2k1k_A Ephrin type-A receptor 24.5 43 0.0013 13.8 2.9 27 2-28 4-36 (38)
71 >3b8l_A Uncharacterized protei 22.8 46 0.0014 13.6 6.9 108 106-229 29-148 (163)
72 >1m98_A Orange carotenoid prot 22.8 24 0.00072 15.3 0.4 26 109-134 19-44 (138)
73 >3flj_A Uncharacterized protei 21.6 26 0.00076 15.2 0.3 26 109-134 22-47 (155)
74 >3iqt_A Signal transduction hi 20.8 50 0.0015 13.3 3.3 51 100-150 35-95 (123)
No 1
>>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} (A:)
Probab=100.00 E-value=1.5e-37 Score=258.19 Aligned_cols=157 Identities=17% Similarity=0.350 Sum_probs=148.9
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 33345542024577776612676798999999999-99999999842767899973189999999987776443498202
Q gi|254780815|r 75 NELFPIGTRLNKVMRDIVSVYTDFDPKDFLNEARN-SYEAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVK 153 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~Fd~~~Fl~gAk~-af~~I~~A~~~gD~~~L~~lls~~~~~~f~~~i~~r~~~~~~~~ 153 (232)
....+..+....+++.+++.||+||+++|+++||. +|++||+||++||++.||+|||+++|+.|+.+|++|+.+|.+++
T Consensus 29 ~~~~~~~~~~~~~~~~i~~~d~~Fd~~~F~~~ak~~~~~~iq~A~~~~D~~~lr~~~t~~~~~~~~~~i~~r~~~g~~~~ 108 (194)
T 2cw9_A 29 LGGLFSKTEXSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAXISGELDILKDWCYEATYSQLAHPIQQAKALGLQFH 108 (194)
T ss_dssp TCCTTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 25666888899999999976889998999999999999999999973679899997099999999999999997798003
Q ss_pred EEEEEHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCC--EEEEEEECC
Q ss_conf 366200012454211346456999999888777667689968057657848999999999618989986--689576327
Q gi|254780815|r 154 SSLVGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPN--WVLISTKLG 231 (232)
Q Consensus 154 ~~~v~i~~~~i~~~~~~~~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~--W~L~~iq~~ 231 (232)
.+++.|.+++|++++.+++.++|||+|++++++|++|++|+||+|+++++..+.|+|||+|++++.+|+ |+|++||++
T Consensus 109 ~~~i~i~~~~i~~~~~~~~~~~itv~f~~~~i~~~~D~~G~iv~G~~~~~~~~~e~W~f~R~~~~~~~~~~W~L~~i~q~ 188 (194)
T 2cw9_A 109 SRILDIDNVDLAXGKXVEQGPVLIITFQAQLVXVVRNPKGEVVEGDPDKVLRXLYVWALCRDQDELNPYAAWRLLDISAS 188 (194)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEEEEEEEEECTTCSCGGGCEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHCCCCEEEEEEEEEEEEEHEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCC
T ss_conf 56402234421110002886089999986720022068998844998873588899999973767898998799973114
No 2
>>2fxt_A Import inner membrane translocase subunit TIM44; mitochondrial translocase, protein transport; 3.20A {Saccharomyces cerevisiae} (A:14-192)
Probab=100.00 E-value=7.3e-34 Score=234.73 Aligned_cols=153 Identities=14% Similarity=0.215 Sum_probs=143.7
Q ss_pred CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 554202457777661267679899999999999-9999998427678999731899999999877764434982023662
Q gi|254780815|r 79 PIGTRLNKVMRDIVSVYTDFDPKDFLNEARNSY-EAIVDSFFEGKVHAIEKLVDSRVYQDFNDSLSTRKSNEKNVKSSLV 157 (232)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~Fd~~~Fl~gAk~af-~~I~~A~~~gD~~~L~~lls~~~~~~f~~~i~~r~~~~~~~~~~~v 157 (232)
...++...+++.+++.||+||++.|+++||.+| ++||+||++||++.|++|||+++|+.|+.+|++|..+|.+++.+++
T Consensus 19 ~~~~~~~~~~~~i~~~dp~F~~~~F~~~ak~~~~~~iq~a~~~~D~~~l~~~~t~~~y~~~~~~i~~~~~~g~~~~~~~i 98 (179)
T 2fxt_A 19 FAETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRIL 98 (179)
T ss_dssp BCCCCSHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHTTCHHHHHHHBCHHHHHHHHHHHHHHHHTTEECCEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 36578999999999878799989999999999999999999868899999985199999999999999987983145650
Q ss_pred EHHHHHHHHHCCCCC--EEEEEEEEEEEEEEEEECC-CCCEECCCCCCCEEEEEEEEEEECCCCCCCC----EEEEEEEC
Q ss_conf 000124542113464--5699999988877766768-9968057657848999999999618989986----68957632
Q gi|254780815|r 158 GIDDMKIINASIEEN--TVYITIRIVGQFISASYDK-DNLLISSDPEIFGKVIDIWTFVRNIPPSNPN----WVLISTKL 230 (232)
Q Consensus 158 ~i~~~~i~~~~~~~~--~~~itV~F~~~~i~~~~d~-~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~----W~L~~iq~ 230 (232)
.+.+++|++++..++ .+.++|+|+++|++|++|+ +|+|++|+++++..+.|+|+|+|++++.+|+ |+|++|||
T Consensus 99 ~i~~~~i~~~~~~~~~~~~~v~v~f~a~~i~~~~d~~~G~iieG~~~~~~~~~e~W~f~R~~~~~~~~~~~~W~l~~i~q 178 (179)
T 2fxt_A 99 DIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPEQIDDDETEGWKILEFVR 178 (179)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEEEECEEECCEETTTBTTSSCSCCCCCCEEEEEEEECCSSSCTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECC
T ss_conf 55540689988614897389999999999999994699977249988418999999999767568988999989997005
Q ss_pred C
Q ss_conf 7
Q gi|254780815|r 231 G 231 (232)
Q Consensus 231 ~ 231 (232)
|
T Consensus 179 a 179 (179)
T 2fxt_A 179 G 179 (179)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 3
>>3k7c_A Putative NTF2-like transpeptidase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PGE; 2.00A {Campylobacter jejuni} (A:)
Probab=95.37 E-value=0.093 Score=30.67 Aligned_cols=96 Identities=9% Similarity=0.284 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHC------HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 99999999984276789997318------999999998777644349820236620001245421134645699999988
Q gi|254780815|r 109 NSYEAIVDSFFEGKVHAIEKLVD------SRVYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITIRIVG 182 (232)
Q Consensus 109 ~af~~I~~A~~~gD~~~L~~lls------~~~~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~itV~F~~ 182 (232)
.+-.....|+.+||.+....|++ ....+.+...+...............+|.+.+|.+++.+++.+.|+|.++.
T Consensus 11 ~~v~~y~~al~~GD~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~I~~~~~~g~~A~V~v~~~~ 90 (114)
T 3k7c_A 11 DLAKNFTKDLYSGDTKSVXSYIDLSEAKSDEEKTFVSDKITQVVAENAAKAKRXGGVKDIQIEEKTINKDSAKIRVLVLF 90 (114)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTBCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEEEE
T ss_conf 99999999998468999986458763346479999987999987754532555089646999998844987899999997
Q ss_pred EEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEE
Q ss_conf 87776676899680576578489999999996189899866895
Q gi|254780815|r 183 QFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226 (232)
Q Consensus 183 ~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~ 226 (232)
. +| ..-...+.+.| .+..|++.
T Consensus 91 ~--------~~----------~~~~~~~~lvk----~dG~Wki~ 112 (114)
T 3k7c_A 91 N--------ND----------NNQSSNVFLAK----KDRKWLVL 112 (114)
T ss_dssp T--------TS----------CEEEEEEEEEE----SSSSEEEC
T ss_pred C--------CC----------CCEEEEEEEEE----ECCEEEEE
T ss_conf 7--------99----------82688899999----89989998
No 4
>>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} (A:1-110)
Probab=94.22 E-value=0.21 Score=28.38 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHH-----HHHHHHHHHHCCCCCEEEEEEHHHHHHHHH-CCCCCEEEEE
Q ss_conf 9999999999999984276789997318999999-----998777644349820236620001245421-1346456999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQD-----FNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEENTVYIT 177 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~~~~-----f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~-~~~~~~~~it 177 (232)
|.+++.++....+||.+||.+....+++...-.. |.+.+..--. | +...-+ ++++.++ +.+++.+.++
T Consensus 1 ~~~p~~~~~~f~~a~~~gd~~~a~~~~s~~~~~~~~~~~~~~~~~~i~~-~--l~~~~~---~v~~~~v~~~~~~~atv~ 74 (110)
T 1vqq_A 1 MASKDKEINNTIDAIEDKNFKQVYKDSSYISKSDNGEVEMTERPIKIYN-S--LGVKDI---NIQDRKIKKVSKNKKRVD 74 (110)
T ss_dssp ----CHHHHHHHHHHHTTCHHHHHHTBCHHHHHHHCHHHHHTHHHHHHH-H--HTCCCE---EEEEEEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHC-C--CCCCCE---EEEECCEEECCCCCEEEE
T ss_conf 9876899999999986461999998659887865679999999998860-3--474642---888342021579807999
Q ss_pred EEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEE
Q ss_conf 9998887776676899680576578489999999996189899866895
Q gi|254780815|r 178 IRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLI 226 (232)
Q Consensus 178 V~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~ 226 (232)
+.+.-.. +........-++++| .+..|++.
T Consensus 75 ~~~t~~~---------------~~g~~~y~~~~~lvk----e~~~WkV~ 104 (110)
T 1vqq_A 75 AQYKIKT---------------NYGNIDRNVQFNFVK----EDGMWKLD 104 (110)
T ss_dssp EEEEEEE---------------TTEEEEEEEEEEEEE----CSSSEEEC
T ss_pred EEEEEEE---------------CCCEEEEEEEEEEEE----ECCCEEEE
T ss_conf 9999882---------------686052541689999----78917998
No 5
>>3cnx_A Uncharacterized protein; NP_825848.1, NTF2-like protein of unknown function, structural genomics, joint center for structural genomics; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} (A:)
Probab=93.90 E-value=0.46 Score=26.26 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHHH-----------------------------HHHHHHHHHHHHCCCCCEEEE
Q ss_conf 999999999999842767899973189999-----------------------------999987776443498202366
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVY-----------------------------QDFNDSLSTRKSNEKNVKSSL 156 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~~-----------------------------~~f~~~i~~r~~~~~~~~~~~ 156 (232)
..++++.....||+++|.+.+..+.+|+.- +.+.......-........++
T Consensus 13 ~I~~~~~~~~~A~~~~D~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~d~i~~~~~~~~~~~~~~~~~~ 92 (170)
T 3cnx_A 13 QVGLANTAFYEAXERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIXANTEYIQFFL 92 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999999998379999997504553333333345545567358867998754799999999999853256664257
Q ss_pred EEHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 2000124542113464569999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 157 VGIDDMKIINASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 157 v~i~~~~i~~~~~~~~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
.-..+...++.+.++-.+...... +..+.+...........+..++|.| .+..|+++..+
T Consensus 93 ------~~~~v~v~gd~A~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~r~t~v~~k----~~g~W~iv~~h 152 (170)
T 3cnx_A 93 ------TDVHVSVTGDTALVTCTENILSGG---PPPDDSDELGPLVGQLVVATNVFRR----TPDGWKLWSHH 152 (170)
T ss_dssp ------EEEEEEEETTEEEEEEEEEEEEEC------------CCCEEEEEEEEEEEEC----CTTCCEEEEEE
T ss_pred ------EEEEEEEECCEEEEEEEEEEEECC---CCCCCCCCCCCCCCEEEEEEEEEEE----ECCEEEEEEEC
T ss_conf ------877999948789999888887404---4455545677633236999999999----69958999983
No 6
>>3h3h_A Uncharacterized snoal-like protein; YP_438428.1, snoal-like protein of unknown function, structural genomics; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264} (A:)
Probab=90.41 E-value=1.2 Score=23.53 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHHH--------------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHH
Q ss_conf 999999999999842767899973189999--------------------999987776443498202366200012454
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVY--------------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKII 165 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~~--------------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~ 165 (232)
..++......+||+++|.+.|..+++|++. +.+..-++..-..-..... ++.
T Consensus 9 ~~~~~v~~~~~a~~~~D~~~l~~~~a~D~v~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--------~~~ 80 (122)
T 3h3h_A 9 FAQQFSREWIDAWNAHDLDAILSHYADGFEXSSPXIVQIAGEPSGRLRGKEQVGAYWREALRXIPDLHF--------EWI 80 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCTTCCC--------EEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEE--------EEE
T ss_conf 999999999999965898999986078879986787776787653010399999999987420143058--------996
Q ss_pred HHCCCCCEEEEEEEEEEEEE--EEE-ECCCCCEECCCCCCCEEEEEEE
Q ss_conf 21134645699999988877--766-7689968057657848999999
Q gi|254780815|r 166 NASIEENTVYITIRIVGQFI--SAS-YDKDNLLISSDPEIFGKVIDIW 210 (232)
Q Consensus 166 ~~~~~~~~~~itV~F~~~~i--~~~-~d~~g~vveG~~~~~~~~~e~W 210 (232)
....+++.+.+..++.+... ... .+.+|+| ..+.++|
T Consensus 81 ~~~~~g~~v~~~~~~~~~~~g~~~~~~~~dGkI--------~~~~~y~ 120 (122)
T 3h3h_A 81 ATLAGVDSVAIHYRGAKGRLALEVFHFGPDRRV--------VKALAHY 120 (122)
T ss_dssp EEEECSSEEEEEEECGGGCEEEEEEEECTTSSE--------EEEEEEE
T ss_pred EEEEECCEEEEEEEECCCCCCEEEEEECCCCCE--------EEEEEEE
T ss_conf 899989999999996569844049999999989--------9999996
No 7
>>3ksp_A Calcium/calmodulin-dependent kinase II association domain; structural genomics, joint center for structural genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15} (A:)
Probab=90.02 E-value=1.3 Score=23.33 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHHH--------HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEE
Q ss_conf 999999999998427678999731899999--------999877764434982023662000124542113464569999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ--------DFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~~--------~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~itV 178 (232)
.+.++.....||+++|.+.+..+++|++.- .-.+.++........ ....+ ..+...+...++.+.++-
T Consensus 11 I~~l~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~i~~~gd~A~~~~ 86 (129)
T 3ksp_A 11 LQTLLSERHAYLXEGNREAXHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQI-QWSNQ---ISESXVVEVFETTALVQE 86 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTTTE-EEEEE---EEEEEEEEECSSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCC-CCCCC---CCCCCEEEEECCEEEEEE
T ss_conf 99999999999983999999987276728984898404689999987525764-41100---012110478424189999
Q ss_pred EEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 9988877766768996805765784899999999961898998668957632
Q gi|254780815|r 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 179 ~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
++..... ..|..+ ....+....|.| .+..|+++..+.
T Consensus 87 ~~~~~~~-----~~g~~~------~~~~r~t~v~~k----~~g~Wki~~~h~ 123 (129)
T 3ksp_A 87 IVEDHFS-----YGRSXY------IGRFRSVSLYHW----ANEGWKWHFHQL 123 (129)
T ss_dssp EEEEEEE-----ETTEEE------EEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred EEEEEEE-----ECCCCC------CEEEEEEEEEEE----ECCEEEEEEEEC
T ss_conf 9999987-----058753------137999999999----599889999847
No 8
>>2owp_A Hypothetical protein BXE_B1374; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Burkholderia xenovorans LB400} (A:)
Probab=86.02 E-value=2.2 Score=21.94 Aligned_cols=104 Identities=9% Similarity=0.225 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHH--HHHHH-------HHHHHHHHHCCCCCEEEEEEHHHHHHHHHC-CCCCE
Q ss_conf 999999999999998427678999731899--99999-------987776443498202366200012454211-34645
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSR--VYQDF-------NDSLSTRKSNEKNVKSSLVGIDDMKIINAS-IEENT 173 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~--~~~~f-------~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~-~~~~~ 173 (232)
...-+.++.....|+.+||.+.|..+..++ ++-.. .++|.+.-+.-....... ...-..+. ...+.
T Consensus 10 ~~eI~~l~~~~~~A~~~~D~~~l~~l~~dd~~l~~~~~~~~~~g~~~i~~y~~~~~~~~~~~----~l~~~~v~~~g~d~ 85 (129)
T 2owp_A 10 VAQVQAAFVEYERALVENDIEAXNALFWHTPETVRYGIAEVQHGGEAIRAWRERCEPVPKSR----KLHRTVVTTFGTDF 85 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHHHHSCCCCTTC----EEEEEEEEEETTTE
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC----CCCEEEEEEECCCE
T ss_conf 99999999999999991899999986317986898228863023768999999744116555----41058999843622
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 699999988877766768996805765784899999999961898998668957632
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
+.++..|.. +|.-.. -.++-+|...+ .++.|+++.-..
T Consensus 86 Av~~~~~~~---------~g~~~~------gr~t~v~~~~~----~~g~WkIv~~H~ 123 (129)
T 2owp_A 86 ATVSTEFTS---------DATPLL------GRQXQTWARLS----PADGWKIVAAHV 123 (129)
T ss_dssp EEEEEEEEE---------TTEEEE------EEEEEEEEECS----TTTCEEEEEEEE
T ss_pred EEEEEEEEE---------CCCCCC------EEEEEEEEECC----CCCCEEEEEEEC
T ss_conf 899999998---------886651------45999999803----799589999710
No 9
>>2r4i_A Uncharacterized protein; YP_678039.1, NTF2-like protein of unknown function, structural genomics; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=85.09 E-value=2.6 Score=21.47 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHHH-----------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEE
Q ss_conf 9999999999842767899973189999-----------99998777644349820236620001245421134645699
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVY-----------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYI 176 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~~-----------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~i 176 (232)
.+.+....+||.++|.+.+..+++|++. +.+.+......... ..+ ......+...++.+.+
T Consensus 9 ~~~~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~g~~~g~~~~~~~~~~~~~~~-----~~~---~~~~~~v~~~~d~a~~ 80 (123)
T 2r4i_A 9 LDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSGKIAL-----RAV---VPSDYIIRIIHDTVVV 80 (123)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEE-----EEE---EEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHCCCCC-----CCE---EECCEEEEEECCEEEE
T ss_conf 99999999999869999997433656799437527870999999985076654-----410---3112279985351556
Q ss_pred EEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 999988877766768996805765784899999999961898998668957632
Q gi|254780815|r 177 TIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 177 tV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
+..+...... .| ..........++|.| .+..|+++.-|.
T Consensus 81 ~~~~~~~~~~-----~~------~~~~~~~~~t~v~~k----~~g~Wki~~~h~ 119 (123)
T 2r4i_A 81 SVNIEIKGEY-----XE------HTLDNTFRYLRVWKL----FDGNWKVIAGSC 119 (123)
T ss_dssp EEEEEEEEEE-----TT------EEEEEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred EEEEEEEEEE-----CC------CCCEEEEEEEEEEEE----ECCEEEEEEEEE
T ss_conf 8999999984-----36------653010899999999----899999999984
No 10
>>3fsd_A NTF2-like protein of unknown function in nutrient uptake; YP_427473.1, structural genomics; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} (A:)
Probab=82.13 E-value=3.5 Score=20.70 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHH-----------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCC-CEE
Q ss_conf 99999999999842767899973189999-----------999987776443498202366200012454211346-456
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVY-----------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE-NTV 174 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~-----------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~-~~~ 174 (232)
.+..++....||.++|.+.+..+++|++. ..+.+........+.....+. ..+...+ +.+
T Consensus 16 I~~l~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~g~~~a 87 (134)
T 3fsd_A 16 IAFYEERLRAAXLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRAGLLKLSRLDLSD--------AVVRAAGEDGR 87 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEEEEEEEEE--------EEEEESSTTEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCCCCCEEEEE--------EEEEEECCCEE
T ss_conf 9999999999988499999998617886999489979308999999971776678537850--------39999836649
Q ss_pred EEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 99999988877766768996805765784899999999961898998668957632
Q gi|254780815|r 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 175 ~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
.++.++.... ...|..... .-..+.+|..+. .+..|+++.-|.
T Consensus 88 ~~~~~~~~~~-----~~~g~~~~~----~~r~t~v~~~~~----g~~~Wriv~~h~ 130 (134)
T 3fsd_A 88 VVVVRAVTAG-----VYDGEAFTE----TLRFTRIWRRTQ----GPAGWKLVAGHC 130 (134)
T ss_dssp EEEEEEEEEE-----EETTEEEEE----EEEEEEEEEEET----TTTEEEEEEEEE
T ss_pred EEEEEEEEEE-----CCCCCCCEE----EEEEEEEEEECC----CCCCEEEEEEEE
T ss_conf 9999999974-----168986246----699999999928----998228999985
No 11
>>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} (A:)
Probab=81.64 E-value=2.2 Score=21.91 Aligned_cols=28 Identities=11% Similarity=-0.066 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+..++....||+++|++.+..|+++++
T Consensus 9 ~~~~~~~~~~a~~~~D~~~~~~~~a~D~ 36 (139)
T 2a15_A 9 ALIASQSSWRCVQAHDREGWLALMADDV 36 (139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf 9999999999998679999998706762
No 12
>>3ebt_A Uncharacterized NTF2-like protein; YP_110153.1, NTF2-like protein of unknown function, structural genomics; 1.30A {Burkholderia pseudomallei K96243} (A:)
Probab=81.54 E-value=2.3 Score=21.86 Aligned_cols=88 Identities=6% Similarity=0.046 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH-------------------HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
Q ss_conf 99999999999984276789997318999-------------------99999877764434982023662000124542
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV-------------------YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIIN 166 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~-------------------~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~ 166 (232)
.++..++...+||.++|.+.+..+++|++ .+.+..-+......-... ..++..
T Consensus 4 ~~~~~v~~~~~a~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------~~~~~~ 75 (132)
T 3ebt_A 4 NNXQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGXSPYGLGGTKHGHDEVIAFIRHVPTHIAEX--------RLAPDE 75 (132)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEE--------EEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC--------EEEEEE
T ss_conf 189999999999986999999986087749998588777888753035589987653123467761--------466789
Q ss_pred HCCCCCEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEE
Q ss_conf 11346456999999888777667689968057657848999999999
Q gi|254780815|r 167 ASIEENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213 (232)
Q Consensus 167 ~~~~~~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~ 213 (232)
...+++.+.+...+++.. ++|+.+. ....++|+|+
T Consensus 76 ~~~~g~~v~~~~~~~~~~------~~g~~~~------~~~~~~~~~~ 110 (132)
T 3ebt_A 76 FIESGERIVVLGTRRVTA------VNGRSAT------LKFVHVWRFE 110 (132)
T ss_dssp EEEETTEEEEEEEEEEEE------TTSCEEE------EEEEEEEEEE
T ss_pred EEECCCCEEEEEEEEEEC------CCCCEEE------EEEEEEEEEE
T ss_conf 995277159999999983------8998999------9999999998
No 13
>>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8} (A:1-57,A:228-267,A:398-426)
Probab=78.94 E-value=2.2 Score=21.91 Aligned_cols=43 Identities=19% Similarity=0.338 Sum_probs=29.5
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 2457777661267679899999999999999999842767899
Q gi|254780815|r 84 LNKVMRDIVSVYTDFDPKDFLNEARNSYEAIVDSFFEGKVHAI 126 (232)
Q Consensus 84 ~~~~~~~i~~~~~~Fd~~~Fl~gAk~af~~I~~A~~~gD~~~L 126 (232)
....++.+.+--|+||-+.||+||+.+.+....+--..+..-+
T Consensus 43 ~~~~~~~~~~n~p~fDIe~LL~GA~~MDe~f~~~dl~eNpA~l 85 (126)
T 2q8n_A 43 VTSAVRNFVENTPDFDIDELHEGAKDAFEKSMKENILENPAAM 85 (126)
T ss_dssp HHHHHHHHHHSCCGGCHHHHHHHHHHHHHHTTCSCGGGCHHHH
T ss_pred HHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 9999999884784050787764356664210122211057889
No 14
>>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=74.50 E-value=5.8 Score=19.26 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
|-|+......+||+.+|.+.+..+++|++
T Consensus 1 ~~e~~v~~~~~a~~~~D~~~~~~~~~~d~ 29 (112)
T 3f14_A 1 GXETTHYSIAQHFSSGDFPAVYACFNDII 29 (112)
T ss_dssp CHHHHHHHHHHHHHTTCGGGTGGGEEEEE
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 92148999999998789999998659989
No 15
>>3gzr_A Uncharacterized protein with A NTF2-like fold; NP_421374.1, domain of unknown function with A NTF2-like fold, structural genomics; HET: MSE GOL; 1.40A {Caulobacter vibrioides} (A:)
Probab=72.83 E-value=6.4 Score=19.01 Aligned_cols=107 Identities=7% Similarity=-0.020 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHH------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEE
Q ss_conf 99999999999842767899973189999------------999987776443498202366200012454211346456
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVY------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~ 174 (232)
.++.+.....||+++|.+.+..|.+++.. +.+...+...-........... ..+.-....++.+
T Consensus 8 I~~~~~~~~~a~~~~D~~~~~~lf~~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~a 83 (146)
T 3gzr_A 8 IQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGXHWRGRDQIVFAHTAFLKTIFKDCKQEL----VTIEARTIAPGSA 83 (146)
T ss_dssp HHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEE----EEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCCCEEEEE----EEEEEEEECCCCE
T ss_conf 999999999999878999998762228569936875473657999999976313665228999----8679999758706
Q ss_pred EEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 9999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 175 ~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
.++..+...... ... |.+......+..+.|+| .+..|+++..+
T Consensus 84 ~~~~~~~~~~~~---~~~-----~~~~~~~~g~~t~~~~k----~~g~Wki~~~~ 126 (146)
T 3gzr_A 84 LAVVTLIQDAYV---TPD-----GRQXPRAHDRLTLLAVE----REGVWRFIHGH 126 (146)
T ss_dssp EEEEEEEECCEE---CTT-----CCEECCEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEEEEEEEE---CCC-----CCCCCCEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 999889997665---699-----97442202899999999----89999999985
No 16
>>1f07_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel, TIM barrel; HET: MPO; 2.00A {Methanothermobacterthermautotrophicus} (A:206-280)
Probab=72.81 E-value=4.5 Score=19.96 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=26.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHCHHHHHHHH
Q ss_conf 999999998427678999731899999999
Q gi|254780815|r 110 SYEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139 (232)
Q Consensus 110 af~~I~~A~~~gD~~~L~~lls~~~~~~f~ 139 (232)
.-..|+++|..||.+....+++++|.+.|.
T Consensus 40 ~~~~i~~~~~aGd~~~a~~~V~de~vd~~~ 69 (75)
T 1f07_A 40 TGKKFGELLGKGDFGGAIGAVDDALMEAFS 69 (75)
T ss_dssp HHHHHHHHHTTTCHHHHHHTCCHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHCCHHHHCCCE
T ss_conf 368899987166554666417887737856
No 17
>>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} (B:)
Probab=72.41 E-value=6.5 Score=18.95 Aligned_cols=108 Identities=10% Similarity=0.098 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH-HH--H-------HHHHHHHHHHCCCCCEEEEEEHHHHHHHHH-CCCCC
Q ss_conf 9999999999999984276789997318999-99--9-------998777644349820236620001245421-13464
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRV-YQ--D-------FNDSLSTRKSNEKNVKSSLVGIDDMKIINA-SIEEN 172 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~-~~--~-------f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~-~~~~~ 172 (232)
...-++++.....||+++|.+.+..+++++. +. . -.++|.+.-....... .... .....+ ...++
T Consensus 11 ~~~I~~~~~~~~~a~~~~D~~~~~~l~~~d~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~-~~~~---~~~~~~~~~~~~ 86 (143)
T 2f86_B 11 KQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQ-VHTT---MLNPNVHIIGED 86 (143)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSCSCCS-CEEE---EEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCC-CCEE---ECCEEEEEECCC
T ss_conf 999999999999999858999998730898636833787652427899887765302466-4203---312268997487
Q ss_pred EEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 569999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 173 ~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
.+.++..+... ..+.+|..+ .......+.|.| .+..|+++..+
T Consensus 87 ~a~~~~~~~~~----~~~~~g~~~------~~~~r~t~v~~k----~~g~W~i~~~h 129 (143)
T 2f86_B 87 AACVAYVKLTQ----FLDRNGEAH------TRQSQESRVWSK----KQGRWVCVHVH 129 (143)
T ss_dssp EEEEEEEEEEE----EECTTSCEE------EEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEEEEEEE----EECCCCCCE------EEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 48999876788----641489730------267999999999----59989999981
No 18
>>2ux0_A Calcium-calmodulin dependent protein kinase (CAM kinase) II gamma; transferase, oligomerisation domain, serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} (A:)
Probab=69.74 E-value=7.5 Score=18.57 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999999984276789997318999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
-+..+..++...+||.+||.+.+..+++++.
T Consensus 12 ~~eI~~~~~~~~~A~~~~D~~~~~~~~~~d~ 42 (143)
T 2ux0_A 12 KQEIIKITEQLIEAINNGDFEAYTKICDPGL 42 (143)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf 9999999999999998289999986446894
No 19
>>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} (A:)
Probab=68.74 E-value=7.8 Score=18.44 Aligned_cols=30 Identities=13% Similarity=0.283 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999999984276789997318999
Q gi|254780815|r 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 105 ~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+..+...+...+||+++|.+.+..+++|++
T Consensus 29 ~~~~~~v~~~~~a~~~~d~~~~~~~~~~d~ 58 (156)
T 1tuh_A 29 EQNAETVRRGYAAFNSGDMKTLTELFDENA 58 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 789999999999998689999998608887
No 20
>>3bb9_A Putative orphan protein; YP_750657.1, putative ketosteroid isomerase, structural genomics; HET: MSE; 1.80A {Shewanella frigidimarina ncimb 400} (A:)
Probab=64.98 E-value=9.3 Score=17.97 Aligned_cols=101 Identities=9% Similarity=0.108 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH-----------HHHHHHHHHHHH---HCCCCCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 999999999984276789997318999-----------999998777644---349820236620001245421134645
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV-----------YQDFNDSLSTRK---SNEKNVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~-----------~~~f~~~i~~r~---~~~~~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
+..+.....||+++|.+.+..+.+|++ .+++.+.....- ..+.... .....+...++.
T Consensus 33 ~~~~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gd~ 104 (148)
T 3bb9_A 33 GNVVKQFHAALQXGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHXLADXAYLKGLTIT--------PKEHQITITGDI 104 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEE--------EEEEEEEEETTE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE--------EEEEEEEECCCE
T ss_conf 999999999998579999998618980997389756789999999876776426751578--------856799984875
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
Q ss_conf 699999988877766768996805765784899999999961898998668957632
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTKL 230 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq~ 230 (232)
+.+..++..... ..|. .........=+|.|. .|..|+++..+.
T Consensus 105 A~~~~~~~~~~~-----~~g~------~~~~~~~~t~v~~k~---~dG~WkI~~~h~ 147 (148)
T 3bb9_A 105 AISTSISHAQGE-----YKGK------SIDSXTXETLVLIKQ---ADGRWKITHVHW 147 (148)
T ss_dssp EEEEEEEEEEEC-----CC--------CEEEEEEEEEEEEEC---TTSCEEEEEEEE
T ss_pred EEEEEEEEEEEE-----CCCC------CCEEEEEEEEEEEEC---CCCEEEEEEEEE
T ss_conf 899999999870-----5877------521578899999999---999399999953
No 21
>>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} (A:)
Probab=64.83 E-value=9.3 Score=17.95 Aligned_cols=27 Identities=7% Similarity=0.024 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999984276789997318999
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+...+...+||.+||.+.+..++++++
T Consensus 26 ~~~v~~~~~a~~~~d~~~~~~~~a~d~ 52 (163)
T 1z1s_A 26 KEILVHSLRLLENGDARGWCDLFHPEG 52 (163)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 999999999987689999998718776
No 22
>>3ke7_A Putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503} (A:)
Probab=64.03 E-value=9.7 Score=17.86 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH-HH--HH------HHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEE
Q ss_conf 999999999984276789997318999-99--99------9877764434982023662000124542113464569999
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV-YQ--DF------NDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTVYITI 178 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~-~~--~f------~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~~itV 178 (232)
+.++....+||++||++.+..+++|++ |. .. .++|.+.-....... ..........+...++.+.++.
T Consensus 17 ~~~v~~~~~a~~~~D~~~~~~~~~~D~~~~~~~~g~~~~G~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~gd~a~~~~ 93 (134)
T 3ke7_A 17 EXIISLEKEALASTDPXAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGXQLPP---ADHFDXIRPVVQVAQNIAVLTF 93 (134)
T ss_dssp HHHHHHHHHHHHCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCCC---CSEEEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCC---CCEEEEECCEEEECCCEEEEEE
T ss_conf 9999999999984899999986378833764789843148999999999765137---7349973121651572357888
Q ss_pred EEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 99888777667689968057657848999999999618989986689576
Q gi|254780815|r 179 RIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 179 ~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
++.... + ..........+|.|. .+..|+++..
T Consensus 94 ~~~~~~-------~--------~~~~~~~~~~v~~~~---~dG~w~~~~~ 125 (134)
T 3ke7_A 94 NLDSYL-------S--------DKVIKWNCTEVYRRN---PDNQWKIIQT 125 (134)
T ss_dssp EEEEEE-------T--------TEEEEEEEEEEEEEC---TTSBEEEEEE
T ss_pred EEEECC-------C--------CCCCCEEEEEEEEEC---CCCCEEEEEE
T ss_conf 888714-------6--------653336899999998---9997999999
No 23
>>3gwr_A Putative calcium/calmodulin-dependent protein kinase type II association domain; structural genomics; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259} (A:)
Probab=63.09 E-value=10 Score=17.75 Aligned_cols=100 Identities=7% Similarity=0.069 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHHH--------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 9999999999842767899973189999--------------99998777644349820236620001245421134645
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRVY--------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~~--------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
++.......||+++|.+.+..|.+++.. +.+.......-........+ ..-..+...++.
T Consensus 11 ~~~~~~~~~a~~~~D~~~~~~l~~~d~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~------~~~~~v~~~gd~ 84 (144)
T 3gwr_A 11 EAAEDAFYAAFEARSLDDXXAVWARDDHVACIHPLAAPLNGRAAVAAGWRSXFGAAGRFRLQ------VKAVHEIRQADH 84 (144)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEE------EEEEEEEECSSE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEECHHHHHHHHHHHHCCCCCCEEE------EEEEEEEECCCE
T ss_conf 99999999999808999999745589988997899640206999988999984328860687------424679851774
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 69999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
+.+...+.... .+|+ .........+.|+| .+..|+++..+
T Consensus 85 a~~~~~~~~~~------~~g~------~~~~~~r~t~v~~k----~~g~W~i~~~~ 124 (144)
T 3gwr_A 85 VIRIVDEFLTI------GDET------APRPAILATNVYRR----EADGWRXVLHH 124 (144)
T ss_dssp EEEEEEEEEEE------TTCS------SCCCCEEEEEEEEE----CSSSEEEEEEE
T ss_pred EEEEEEEEEEE------CCCC------CCCEEEEEEEEEEE----ECCEEEEEEEC
T ss_conf 99999999981------5887------55225999999999----39949999983
No 24
>>2rfr_A Uncharacterized protein; YP_001166107.1, structural genomics, joint center for structural genomics, JCSG; 1.16A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=60.94 E-value=11 Score=17.51 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCC
Q ss_conf 9999999999999842767899973189999------------9999877764434982023662000124542113464
Q gi|254780815|r 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRVY------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEEN 172 (232)
Q Consensus 105 ~gAk~af~~I~~A~~~gD~~~L~~lls~~~~------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~ 172 (232)
..-+..+...-.|++.+|.+.+..+.+|+.. +.+..-+...-........... ...-..+...++
T Consensus 19 ~aI~~~~~~y~~a~d~~D~~~~~~lf~~D~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~h---~~~~~~i~~~gd 95 (155)
T 2rfr_A 19 EEIRELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALXADGCAH---FLGPATVTVEGD 95 (155)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEE---EECCCEEEEETT
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE---ECCCEEEEEECC
T ss_conf 99999999999997699989998636798799801456643333188999998753047773587---437879999088
Q ss_pred EEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 569999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 173 TVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 173 ~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
.+.++-++..... ++.|. .....-....+|+| .+..|+++...
T Consensus 96 ~A~~~~~~~~~~~----~~~g~------~~~~~~~~t~~~~k----~~g~Wki~~~~ 138 (155)
T 2rfr_A 96 TATARCHSVVFRC----VSGTF------GSHRVSANRWTFRR----TPAGWRAVRRE 138 (155)
T ss_dssp EEEEEEEEEEEEE----ETTEE------EEEEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred CEEEEEEEEEEEE----CCCCC------EEEEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 2199999999999----58996------69999999999999----89999999999
No 25
>>1ezw_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel, TIM barrel, oxidoreductase; 1.65A {Methanopyrus kandleri} (A:232-318)
Probab=59.90 E-value=9.4 Score=17.93 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=26.0
Q ss_pred HHHHHHHHHCCCHHHHHHHHCHHHHHHHH
Q ss_conf 99999998427678999731899999999
Q gi|254780815|r 111 YEAIVDSFFEGKVHAIEKLVDSRVYQDFN 139 (232)
Q Consensus 111 f~~I~~A~~~gD~~~L~~lls~~~~~~f~ 139 (232)
-..|+++|..||.+..-.+++++|.+.|.
T Consensus 40 ~~~i~~~~~~gd~~~a~~~V~De~vd~~~ 68 (87)
T 1ezw_A 40 AEQIAEAIGKGDFGTAIGLVDEDMIEAFS 68 (87)
T ss_dssp TTHHHHHTTTTCHHHHHHHCCHHHHHHHC
T ss_pred HHHHHHHHCCCCHHHHHHHCCHHHHCCCE
T ss_conf 67888874255455676414387737626
No 26
>>3f9s_A Putative polyketide cyclase; AFE_2539, structural genomics, joint center for structural genomics, JCSG; 1.76A {Acidithiobacillus ferrooxidans ATCC23270} (A:)
Probab=59.54 E-value=12 Score=17.36 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH----------------HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCC
Q ss_conf 999999999984276789997318999----------------9999987776443498202366200012454211346
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV----------------YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~----------------~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~ 171 (232)
+.......+||+++|.+.+..|++|++ .+.+..-+......-.....++ .++...+
T Consensus 10 ~~v~~~~~~a~~~~d~~~~~~~~~~d~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i--------~~~~~~~ 81 (146)
T 3f9s_A 10 EILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDI--------QGLFADG 81 (146)
T ss_dssp HHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHSTTCEEEE--------EEEEEET
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE--------EEEEECC
T ss_conf 99999999999679999999873646588703422431144579999999999885589741110--------3445303
Q ss_pred CEEEEEEEEEEEE
Q ss_conf 4569999998887
Q gi|254780815|r 172 NTVYITIRIVGQF 184 (232)
Q Consensus 172 ~~~~itV~F~~~~ 184 (232)
+.+.+...+.+..
T Consensus 82 ~~v~~~~~~~~~~ 94 (146)
T 3f9s_A 82 DAVVXTWLWTATH 94 (146)
T ss_dssp TEEEEEEEEEEEC
T ss_pred CCEEEEEEEECCC
T ss_conf 2034687530245
No 27
>>3cu3_A Domain of unknown function with A cystatin-like fold; ZP_00107529.1, structural genomics, joint center for structural genomics; 2.00A {Nostoc punctiforme pcc 73102} (A:1-139)
Probab=59.16 E-value=12 Score=17.32 Aligned_cols=104 Identities=6% Similarity=0.029 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHH------------HHHHHHHHHHHHCCC-CCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 99999999999842767899973189999------------999987776443498-20236620001245421134645
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVY------------QDFNDSLSTRKSNEK-NVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~------------~~f~~~i~~r~~~~~-~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
-+..+.....||+++|.+.+..+.+|+.. +.+....+....... ........ +.-....++.
T Consensus 18 I~~~~~~~~~a~~~~D~~~~~~l~~~d~~~~~~~g~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~gd~ 92 (139)
T 3cu3_A 18 IRAFHRQXIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEV-----DFVRFVNSQL 92 (139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEE-----EEEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE-----EEEEEECCCE
T ss_conf 99999999999986798999863136715633775444637789999998742055664799840-----2899977978
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 69999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
+.+..++.... .+..|.... .......+|.| .+..|+++...
T Consensus 93 a~~~~~~~~~~----~~~~g~~~~------~~~~~~~~~~k----~~g~Wki~~~h 134 (139)
T 3cu3_A 93 ALXLVVIRVIL----PGQTETSAS------RDSLPLYVVTK----GDEGWQIEGLL 134 (139)
T ss_dssp EEEEEEEEEEC----TTCSSBCGG------GCBCCEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEEEEEEE----CCCCCCCCC------CCEEEEEEEEE----ECCEEEEEEEE
T ss_conf 99999999995----279888754------12699999998----09909999875
No 28
>>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus subtilis} (A:)
Probab=58.90 E-value=12 Score=17.29 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999999984276789997318999
Q gi|254780815|r 103 FLNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 103 Fl~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
..+.+++......+||+.+|.+.+..|++|++
T Consensus 8 ~~~~~~~lv~~~~~a~~~~d~~~~~~~~~~d~ 39 (150)
T 1s5a_A 8 EFEKACETLRKFXAYXLEKDXKSWTELWDENA 39 (150)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 07999999999999998389999998528977
No 29
>>3ff2_A Uncharacterized cystatin fold protein (YP_497570.1) from NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=57.46 E-value=3.2 Score=20.88 Aligned_cols=28 Identities=7% Similarity=0.108 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
++...+...+||+++|.+.+..|++|++
T Consensus 4 ~~~~v~~~~~a~~~~D~~~~~~~~~~d~ 31 (117)
T 3ff2_A 4 NLETAKAXIAAYNAQDVDTYVSYXTDDA 31 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 7999999999998669999997536666
No 30
>>3f7s_A Uncharacterized NTF2-like protein; NP_746665.1, NTF2-like protein of unknown function, structural genomics; 2.11A {Pseudomonas putida KT2440} (A:1-127)
Probab=57.28 E-value=13 Score=17.12 Aligned_cols=102 Identities=8% Similarity=0.044 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHH-------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 99999999999842767899973189999-------------99998777644349820236620001245421134645
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVY-------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~-------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
-++++.....||+++|.+.+..+.+++.. +.+..-.............. ......+...++.
T Consensus 10 I~~~~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gd~ 84 (127)
T 3f7s_A 10 IRQLIERWXQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEXCXGXCTGPXVF-----ELAQLTVHAAGDL 84 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEE-----EEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEE-----ECCEEEEEECCCE
T ss_conf 99999999999986899999986214757985279941237999999999876416853465-----3011589972877
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 69999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
+.++.++.... .+|. ..........+|.| .+..|+++..+
T Consensus 85 A~~~~~~~~~~------~~g~------~~~~~~~~t~~~~k----~~g~Wki~~~h 124 (127)
T 3f7s_A 85 ALAHWLNRCGP------GDDE------SQCGFXRATVGYRR----QGGQWQVIHEH 124 (127)
T ss_dssp EEEEEEEEEEE------SSCG------GGCEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEEEEEEC------CCCC------CCCEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 99999999811------4677------75325999999999----89989999996
No 31
>>3fh1_A Uncharacterized NTF2-like protein; NP_108339.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti} (A:)
Probab=51.95 E-value=4.4 Score=20.01 Aligned_cols=28 Identities=14% Similarity=0.154 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
++...+...+||+++|++.+..|+++++
T Consensus 19 ~~~~~~~~~~a~~~~D~~~~~~~~~~D~ 46 (129)
T 3fh1_A 19 TAEIXRRFNDVFQLHDPAALPELIAEEC 46 (129)
T ss_dssp HHHHHHHHHHHHHTTCGGGHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 9999999999998479999998608766
No 32
>>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens str} (A:)
Probab=51.95 E-value=7.4 Score=18.58 Aligned_cols=29 Identities=7% Similarity=0.084 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+++..+...+||+++|.+.+..+++|++
T Consensus 4 ~~~~~v~~~~~a~~~~d~~~~~~~~~~d~ 32 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 08999999999986769999998608765
No 33
>>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.40A {Pectobacterium atrosepticum} (A:)
Probab=51.04 E-value=16 Score=16.48 Aligned_cols=105 Identities=5% Similarity=-0.005 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHHH------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 999999999999842767899973189999------------99998777644349820236620001245421134645
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVY------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~~------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
..++.++....||+++|.+.+..+.+++.. +.+.......-........ ......+...++.
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~lf~~d~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~------~~~~~~i~~~gd~ 85 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDDGVLXGPGRPAAVGKDELAEVYLSVFETVGFDXA------YEIKEVVQTSADW 85 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEE------EEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHHHHCCCCCC------EEEEEEECCCCCE
T ss_conf 9999999999999868999999862688159935886464589999999999852565221------1334135058986
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 6999999888777667689968057657848999999999618989986689576
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
+.++..+..... ...+|. .........+.|.|. .+..|+++.-
T Consensus 86 a~~~~~~~~~~~---~~~~g~------~~~~~g~~~~~~~k~---~dG~W~i~~~ 128 (135)
T 3d9r_A 86 AFVRSATEGTET---NKATGV------VTPAAYQELFLLRKS---ATGSWQTARY 128 (135)
T ss_dssp EEEEEEEEEEEE---ETTTCC------EEEEEEEEEEEEEEC---TTSCEEEEEE
T ss_pred EEEEEEEEEEEE---ECCCCC------CCCCCEEEEEEEEEC---CCCCEEEEEE
T ss_conf 999999999998---347774------201443699999999---9994999999
No 34
>>3ff0_A Phenazine biosynthesis protein PHZB 2; protein PHZB2 with cystatin-like fold and unknown function in phenazine biosynthesis; 1.90A {Pseudomonas aeruginosa} (A:)
Probab=50.86 E-value=16 Score=16.46 Aligned_cols=31 Identities=6% Similarity=-0.160 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999999984276789997318999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
...+.+.+.....||+++|.+.+..++++++
T Consensus 17 ~~~~~~~v~~~~~a~~~~D~~~~~~~~~~d~ 47 (163)
T 3ff0_A 17 LRRKNRETVVKYXNTKGQDRLRRHELFVEDG 47 (163)
T ss_dssp HHHHHHHHHHHHHTCCGGGGGGGGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 9999999999999987358747999727864
No 35
>>3ec9_A Uncharacterized NTF2-like protein; YP_440611.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.60A {Burkholderia thailandensis E264} (A:)
Probab=47.12 E-value=18 Score=16.10 Aligned_cols=29 Identities=3% Similarity=-0.180 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHHH
Q ss_conf 99999999999842767899973189999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRVY 135 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~~ 135 (232)
.+...+...+||..+|.+.+..+++|++.
T Consensus 14 ~~~~v~~~~~a~~~~d~~~~~~~~~~d~~ 42 (140)
T 3ec9_A 14 PYQIVADHYAASDRHDPAAXXADIAPAIE 42 (140)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCCE
T ss_conf 99999999999876699999987185514
No 36
>>3fka_A Uncharacterized NTF-2 like protein; YP_166335.1, NTF-2 like protein of unknown function, structural genomics; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3} (A:)
Probab=46.06 E-value=19 Score=15.99 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH--------------HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCE
Q ss_conf 999999999984276789997318999--------------999998777644349820236620001245421134645
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV--------------YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENT 173 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~--------------~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~ 173 (232)
+........+.+++|.+.++.+.+|+. .+.|.+.+......+.... ..+..+.+.++.
T Consensus 12 ~~l~~~y~~~~d~~d~~~~~~lF~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~i~gd~ 83 (120)
T 3fka_A 12 TALVETYVXAXTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIAXCEDAADAETDPF--------WAISSVSVQGDI 83 (120)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHHHHHHHCCSSCCCC--------EEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCEEECCHHHHHHHHCCCCCCCCCCE--------EEEEEEEEECCC
T ss_conf 999999999998459999998758884266436785064249999987424456798727--------778999971884
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 6999999888777667689968057657848999999999618989986689576
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
+.+.+.+... .....|.|++.|. +..|+++.-
T Consensus 84 A~~~~~~~~~-------------------~~~~~d~~~~~k~----dg~WkI~~~ 115 (120)
T 3fka_A 84 AXLHVENDWA-------------------GXRFDDFLTVLLH----EGSWRIVSK 115 (120)
T ss_dssp EEEEEEEEET-------------------TEEEEEEEEEEEE----TTEEEEEEE
T ss_pred CEEEEEEEEC-------------------CCEEEEEEEEEEE----CCEEEEEEE
T ss_conf 1699999976-------------------9659999999987----998999999
No 37
>>3b7c_A Uncharacterized protein; NP_715767.1, NTF-2 like protein of unknown function, structural genomics; HET: MSE; 1.70A {Shewanella oneidensis mr-1} (A:)
Probab=45.98 E-value=19 Score=15.99 Aligned_cols=29 Identities=7% Similarity=0.020 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
..+.++.....||+++|.+.+..+.+++.
T Consensus 6 ~I~~~~~~~~~a~~~~D~d~~~~~~~~d~ 34 (122)
T 3b7c_A 6 DIVQLLKGQEEAWNRGDLDAYXQGYWQNE 34 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCCST
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 99999999999998599999997531277
No 38
>>3fgy_A Uncharacterized NTF2-like protein; YP_554211.1, NTF2-like protein of unknown function., structural genomics; HET: MSE; 1.59A {Burkholderia xenovorans LB400} (A:)
Probab=45.27 E-value=20 Score=15.92 Aligned_cols=89 Identities=8% Similarity=-0.009 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHHH----------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCC
Q ss_conf 999999999999842767899973189999----------------9999877764434982023662000124542113
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRVY----------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASI 169 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~~----------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~ 169 (232)
..+..+....+||+++|.+.+..++++++. +.+..-....-.. .... ..++.....
T Consensus 6 ~~~~iv~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~ 77 (135)
T 3fgy_A 6 ENVQIVKDFFAAXGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEX-----VEIS---YPEPPEFVA 77 (135)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHH-----EEEE---CSSCCEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCCC---CEEEEEEEC
T ss_conf 99999999999998589999998718574885368867676303336788888775330-----2432---204777512
Q ss_pred CCCEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEE
Q ss_conf 46456999999888777667689968057657848999999999
Q gi|254780815|r 170 EENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFV 213 (232)
Q Consensus 170 ~~~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~ 213 (232)
.++.+.+...+.+ +...+|+.+. ....++|+|.
T Consensus 78 ~g~~~~~~~~~~~-----~~~~~g~~~~------~~~~~~~~~~ 110 (135)
T 3fgy_A 78 QGERVLVVGFATG-----RVKSTNRTFE------DDWVFAITVR 110 (135)
T ss_dssp ETTEEEEEEEEEE-----EETTTCCEEE------EEEEEEEEEE
T ss_pred CCCEEEEEEEEEE-----EEECCCCEEE------EEEEEEEEEE
T ss_conf 7835899988888-----8811793687------8799999999
No 39
>>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} (A:)
Probab=42.75 E-value=12 Score=17.27 Aligned_cols=28 Identities=4% Similarity=0.055 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
++..+....+||+.+|.+.+..+++|++
T Consensus 24 ~~~~v~~~~~a~~~~D~~~~~~~~~~d~ 51 (149)
T 1nww_A 24 DEKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 8999999999987669999998717775
No 40
>>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} (A:1-134)
Probab=42.17 E-value=22 Score=15.62 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+++.+....+||.++|.+.+..++++++
T Consensus 5 ~~~~~v~~~~~a~~~~d~~~~~~~~~~d~ 33 (134)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPDI 33 (134)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 99999999999997489999999847543
No 41
>>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} (A:)
Probab=42.10 E-value=13 Score=16.99 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.++..++....||.++|.+.+..|+++++
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D~ 36 (131)
T 1oh0_A 8 EVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 99999999999997689999998726782
No 42
>>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=40.96 E-value=13 Score=17.03 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999984276789997318999
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+...+...+||+.+|.+.+..+++|++
T Consensus 9 ~~~v~~~~~a~~~~D~~~~~~~~a~d~ 35 (114)
T 3f40_A 9 RDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 999999999985469999998605885
No 43
>>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} (A:)
Probab=40.49 E-value=13 Score=17.04 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
..+.......+||+.+|.+.+..|++|++
T Consensus 6 ~~~~~~~~~~~a~~~~D~~~~~~~~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 99999999999987699999998707987
No 44
>>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structural genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} (A:)
Probab=40.44 E-value=23 Score=15.45 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
..+...+...+||.++|.+.+..|++|++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~~~~~D~ 34 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 99999999999998689999987517888
No 45
>>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} (A:)
Probab=39.72 E-value=11 Score=17.54 Aligned_cols=31 Identities=13% Similarity=0.264 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999999984276789997318999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
-+.++...+...+||+.+|.+.+..+++|++
T Consensus 14 ~~~~~~~v~~~~~a~~~~D~~~~~~~~~~D~ 44 (149)
T 2bng_A 14 TTEAIRAVEAFLNALQNEDFDTVDAALGDDL 44 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 3369999999999997579999999845661
No 46
>>3f7x_A Putative polyketide cyclase; NP_743055.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440} (A:)
Probab=37.56 E-value=10 Score=17.66 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+++..+...+||.++|.+.+..|++|++
T Consensus 22 ~~~~v~~~~~a~~~~D~~~~~~~~a~D~ 49 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDXPAFLALLSEDV 49 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 9999999999998789999998449988
No 47
>>3i0y_A Putative polyketide cyclase; NP_635776.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.50A {Xanthomonas campestris PV} (A:)
Probab=37.53 E-value=12 Score=17.22 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
..+..++...+||+++|.+.+..|++|++
T Consensus 9 ~~~~~v~~~~~a~~~~d~~~~~~~~a~d~ 37 (140)
T 3i0y_A 9 RATGLVQAYYEAFNRGDWDAXLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 99999999999997789999998708895
No 48
>>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} (A:)
Probab=37.02 E-value=26 Score=15.11 Aligned_cols=30 Identities=10% Similarity=0.059 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999999984276789997318999
Q gi|254780815|r 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 105 ~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+.+++..+...+||+++|.+.+..++++++
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~~~d~ 33 (152)
T 2gex_A 4 TANKERCLEXVAAWNRWDVSGVVAHWAPDV 33 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 899999999999996389999998718430
No 49
>>3g0k_A Putative membrane protein; YP_498150.1, protein of unknown function with A cystatin- like fold; HET: MSE; 1.30A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=35.55 E-value=28 Score=14.96 Aligned_cols=58 Identities=5% Similarity=0.131 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHH----------HHHHHHHHHHHHCCCCCEEEE
Q ss_conf 9899999999999999999842767899973189999----------999987776443498202366
Q gi|254780815|r 99 DPKDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVY----------QDFNDSLSTRKSNEKNVKSSL 156 (232)
Q Consensus 99 d~~~Fl~gAk~af~~I~~A~~~gD~~~L~~lls~~~~----------~~f~~~i~~r~~~~~~~~~~~ 156 (232)
+...--..++...+...+||+.+|.+.+..|++|++. +.+..-+....+.......++
T Consensus 22 ~~~~~~~~~~~v~~~~~~a~~~~D~~~~~~~~a~D~~~~~p~~~~G~~~~~~~~~~~~~~~~~~~~~i 89 (148)
T 3g0k_A 22 RTAEEQANHDLVIEXYNKVLIAXDSSAVDRYIAPGYVQHSSLAEPSVEALKGFLDRVRAESPDARQTI 89 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEECCSSSCSSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 13047789999999999998667989999882979152499999998999999998750189855899
No 50
>>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, protein structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} (A:)
Probab=35.45 E-value=28 Score=14.95 Aligned_cols=28 Identities=7% Similarity=0.205 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+...+...+||.++|.+.+..|+++++
T Consensus 6 ~~~iv~~~~~a~~~~d~~~~~~~~~~d~ 33 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 9999999999985789999998728886
No 51
>>3blz_A NTF2-like protein of unknown function; YP_001049020.1, structural genomics, joint center for structural genomics, JCSG; 1.75A {Shewanella baltica OS155} (A:)
Probab=35.06 E-value=28 Score=14.91 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH---------------HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC
Q ss_conf 99999999999984276789997318999---------------999998777644349820236620001245421134
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV---------------YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIE 170 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~---------------~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~ 170 (232)
.-++.....-.+++++|.+.++.+-+|+. .+.|...+..+-....... ..+.++.+.
T Consensus 13 aI~~l~~~y~~a~d~~d~~~~~~lf~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~v~ 84 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIXRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAK--------AAIARIDIV 84 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHHTCCCCTTCE--------EEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEE--------EEEEEEEEE
T ss_conf 999999999999984899999874089808997526885310538789998873468873167--------113799980
Q ss_pred CCEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 6456999999888777667689968057657848999999999618989986689576
Q gi|254780815|r 171 ENTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 171 ~~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
++.+.+++.+..-. .....+.+++.|. +..|+++..
T Consensus 85 gd~A~~~~~~~~~~------------------~~~~~~~~~~~r~----dg~W~I~~~ 120 (128)
T 3blz_A 85 GTAASARIDTDDIS------------------GFRFTDFFNLLKV----EGKWTVVSK 120 (128)
T ss_dssp TTEEEEEEEEEEET------------------TEEEEEEEEEEEE----TTEEEEEEE
T ss_pred CCCEEEEEEEEEEC------------------CCEEEEEEEEEEE----CCEEEEEEE
T ss_conf 78438999998833------------------9778788999987----998999999
No 52
>>3duk_A NTF2-like protein of unknown function; YP_544675.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.20A {Methylobacillus flagellatus KT} (A:)
Probab=34.97 E-value=28 Score=14.90 Aligned_cols=91 Identities=11% Similarity=0.175 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH---------------HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCC
Q ss_conf 9999999999984276789997318999---------------9999987776443498202366200012454211346
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV---------------YQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~---------------~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~ 171 (232)
-+..+..-..+++++|.+.+..+-+|+. .+.+.+.+..+..... .. .....+...+
T Consensus 14 I~~l~~~y~~a~d~~D~~~~~~lF~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~--------~~~~~I~i~g 84 (125)
T 3duk_A 14 ITEVLNVYXNAAESGTGEEXSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPAKN-VQ--------SRITNIDIVG 84 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCCTT-CE--------EEEEEEEEET
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC-EE--------EEEEEEEECC
T ss_conf 99999999999985899999975888818997538975313339999887653799762-68--------7778998349
Q ss_pred CEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 456999999888777667689968057657848999999999618989986689576
Q gi|254780815|r 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 172 ~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
+.+.+.+.+... ......+.|++.|. +..|+++.-
T Consensus 85 d~A~a~~~~~~~------------------~~~~~~~~~~l~r~----dg~WkI~~~ 119 (125)
T 3duk_A 85 TVAHARVEAENW------------------TNFKFSDLFLLLKL----DGKWTIVNK 119 (125)
T ss_dssp TEEEEEEEEECS------------------SSCCEEEEEEEEEE----TTEEEEEEE
T ss_pred CEEEEEEEEEEC------------------CCCEEEEEEEEEEE----CCEEEEEEE
T ss_conf 959999999860------------------58788678899987----999999999
No 53
>>1puo_A Major allergen I polypeptide, fused chain 2, chain 1; CAT allergen, uteroglobin, secretoglobin; 1.85A {Felis catus} (A:1-52,A:142-170)
Probab=34.67 E-value=25 Score=15.22 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 999999999998427678999731
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLV 130 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~ll 130 (232)
-|.||+.||.+|.++--++-.+-+
T Consensus 38 EkvAfeKIQDCY~E~~~~~~~~~~ 61 (81)
T 1puo_A 38 ERTAMKKIQDCYVENTEEDKENAL 61 (81)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 899999999998754377899899
No 54
>>3dmc_A NTF2-like protein; YP_322774.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.65A {Anabaena variabilis atcc 29413} (A:)
Probab=33.62 E-value=30 Score=14.77 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999999984276789997318999
Q gi|254780815|r 104 LNEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 104 l~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+.+++.++...+||..+|.+.+..+++|++
T Consensus 11 ~~~~~~~v~~~~~a~~~~d~~~~~~~~~~D~ 41 (134)
T 3dmc_A 11 LKVAHQGFEFFTQGLATGEWQKFLDXLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 9999999999999997689989998706737
No 55
>>3k0z_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NHE; 1.91A {Bacillus cereus atcc 10987} (A:)
Probab=33.26 E-value=30 Score=14.73 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999999984276789997318999
Q gi|254780815|r 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 105 ~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+..+.......+||.++|.+.+..++++++
T Consensus 34 ~~~~~~v~~~~~a~~~~D~~~~~~~~~~d~ 63 (159)
T 3k0z_A 34 TEXVHAAQRFYAFWDTGKEELIPQTVTENF 63 (159)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 999999999999985699999998628889
No 56
>>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, lyase, structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} (A:)
Probab=32.21 E-value=4.5 Score=19.95 Aligned_cols=30 Identities=10% Similarity=0.323 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 999999999999984276789997318999
Q gi|254780815|r 105 NEARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 105 ~gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+..+...+...+||+.+|.+.+..+++|++
T Consensus 2 ~~~~~~v~~~~~a~~~~d~~~~~~l~~~d~ 31 (144)
T 1sjw_A 2 SRQTEIVRRMVSAFNTGRTDDVDEYIHPDY 31 (144)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHCE
T ss_conf 828999999999997389999999862130
No 57
>>3h51_A Putative calcium/calmodulin dependent protein kinase II association domain; NP_636218.1, structural genomics; HET: MSE PG4; 1.70A {Xanthomonas campestris PV} (A:)
Probab=31.86 E-value=32 Score=14.58 Aligned_cols=101 Identities=7% Similarity=0.103 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHCHHH-H------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEE
Q ss_conf 999999999984276789997318999-9------------999987776443498202366200012454211346456
Q gi|254780815|r 108 RNSYEAIVDSFFEGKVHAIEKLVDSRV-Y------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEENTV 174 (232)
Q Consensus 108 k~af~~I~~A~~~gD~~~L~~lls~~~-~------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~~~~ 174 (232)
++.+.....||+.+|.+.+..+.++++ | +.+....+..-........... ......++.+
T Consensus 23 ~~~~~~~~~a~~~~D~~~~~~l~~~d~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~a 95 (156)
T 3h51_A 23 AALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEXFLTKKPKGVINYR-------TVRLLDDDSA 95 (156)
T ss_dssp HHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEE-------EEEECSSSEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECC-------EEEEECCCHH
T ss_conf 999999999998599999997504464468613884005889987888876430775301000-------5899648436
Q ss_pred EEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 9999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 175 YITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 175 ~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
.++..+.... .+..|.. ........+.|.| .+..|+++...
T Consensus 96 ~~~~~~~~~~----~~~~~~~------~~~~~r~t~v~~k----~~g~Wki~~~~ 136 (156)
T 3h51_A 96 VDAGVYTFTL----TDKNGKK------SDVQARYTFVYEK----RDGKWLIINHH 136 (156)
T ss_dssp EEEEEEEEEE----ECTTSCE------EEEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred HHEEEEEEEE----ECCCCCC------CEEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 3323688987----2258986------3689999999999----89988999997
No 58
>>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} (A:)
Probab=31.76 E-value=32 Score=14.57 Aligned_cols=99 Identities=5% Similarity=0.017 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHH--------------HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCC
Q ss_conf 9999999999998427678999731899--------------99999987776443498202366200012454211346
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSR--------------VYQDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~--------------~~~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~ 171 (232)
..++.+..--.+++.+|.+.+..+.+|+ .+..+...........+.... ..+...+
T Consensus 15 ~I~~~~~~~~~a~d~~d~~~~~~lft~D~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~h~i~~----------~~v~~~g 84 (170)
T 2chc_A 15 RIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARVVRGRHLTTD----------LLYEVDG 84 (170)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHCCCCEEEEE----------EEEEEET
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC----------EEEEECC
T ss_conf 999999999999708999999875258839996387314488889999873367606897114----------2999738
Q ss_pred CEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
Q ss_conf 456999999888777667689968057657848999999999618989986689576
Q gi|254780815|r 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLIST 228 (232)
Q Consensus 172 ~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~i 228 (232)
+.+.++..+.... .+..|..+ ...-...++|+|. +..|++..-
T Consensus 85 d~a~~~~~~~~~~----~~~~~~~~------~~~g~~~~~~~k~----~g~WkI~~~ 127 (170)
T 2chc_A 85 DVATGRSASVVTL----ATAAGYKI------LGSGEYQDRLIKQ----DGQWRIAYR 127 (170)
T ss_dssp TEEEEEEEEEEEE----EETTEEEE------EEEEEEEEEEEEE----TTEEEEEEE
T ss_pred CCEEEEEEEEEEE----EECCCCEE------EEEEEEEEEEEEE----CCEEEEEEE
T ss_conf 8489999999999----83577429------9999999999999----999999999
No 59
>>3ehc_A Snoal-like polyketide cyclase; 17741376, structural genomics, joint center for structural genomics, JCSG; 2.12A {Agrobacterium tumefaciens str} (A:)
Probab=30.94 E-value=8.5 Score=18.21 Aligned_cols=28 Identities=25% Similarity=0.355 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+++......+||..+|.+.+..|++|++
T Consensus 5 ~~~~v~~~~~a~~~~d~~~~~~~~~~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHE
T ss_conf 9999999999996699999998754237
No 60
>>3g8z_A Protein of unknown function with cystatin-like fold; NP_639274.1, snoal-like polyketide cyclase, structural genomics; HET: MSE; 1.90A {Xanthomonas campestris PV} (A:)
Probab=30.48 E-value=33 Score=14.44 Aligned_cols=28 Identities=7% Similarity=0.209 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+...+...+||+.+|.+.+..+++|++
T Consensus 22 ~~~~v~~~~~a~~~~d~~~~~~~~a~d~ 49 (148)
T 3g8z_A 22 TIDIAKSYITAIQTGDHATLGSIISPDV 49 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 9999999999998599999998559878
No 61
>>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A (X:427-627)
Probab=29.86 E-value=34 Score=14.37 Aligned_cols=49 Identities=12% Similarity=0.188 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHCCCCCCH-HHH-------HHHHHHHH-HHHHHHHHCCCHHHHHHHHCH
Q ss_conf 024577776612676798-999-------99999999-999999842767899973189
Q gi|254780815|r 83 RLNKVMRDIVSVYTDFDP-KDF-------LNEARNSY-EAIVDSFFEGKVHAIEKLVDS 132 (232)
Q Consensus 83 ~~~~~~~~i~~~~~~Fd~-~~F-------l~gAk~af-~~I~~A~~~gD~~~L~~lls~ 132 (232)
.....+..+.+..+.|.. -+| |. .|... ..|.+||.++|++.|+.++..
T Consensus 44 ~la~~l~~~~~~~~~~~~lf~~y~~La~vL~-~K~~Lg~~I~~AY~~~Dk~~L~~la~~ 101 (201)
T 2epl_X 44 SSAQQLGEISKRAGEYAYIFETQAQLNALLA-LKISITSGIQKAYRNGDKEHLSALAEK 101 (201)
T ss_dssp HHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 9999999988745440357999999999999-988899999999970276678775576
No 62
>>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} (A:227-309,A:409-499)
Probab=29.81 E-value=21 Score=15.68 Aligned_cols=36 Identities=3% Similarity=0.164 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHH
Q ss_conf 999999999999999998427678999731899999
Q gi|254780815|r 101 KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136 (232)
Q Consensus 101 ~~Fl~gAk~af~~I~~A~~~gD~~~L~~lls~~~~~ 136 (232)
..|...+++.+.-+-+...+||...|+.+|.+.++.
T Consensus 106 AQl~~a~~~~~pd~~~~i~~Gdf~~l~~WL~e~Ih~ 141 (174)
T 1ka2_A 106 AQLYYHIKKDIPDFEEKVAKAEFDPIKAWLREKIHR 141 (174)
T ss_dssp HHHHHHHHHHCTTHHHHHHHTCCHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 999999998664787788748989999999999985
No 63
>>1sr2_A Putative sensor-like histidine kinase YOJN; four-helical bundle, transferase; NMR {Escherichia coli} (A:)
Probab=28.90 E-value=36 Score=14.27 Aligned_cols=32 Identities=6% Similarity=0.087 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 89999999999999999984276789997318
Q gi|254780815|r 100 PKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD 131 (232)
Q Consensus 100 ~~~Fl~gAk~af~~I~~A~~~gD~~~L~~lls 131 (232)
...|+.........|..|+.++|.+.|+.++.
T Consensus 37 l~~f~~~~~~~l~~L~~a~~~~d~~~i~~~aH 68 (116)
T 1sr2_A 37 YALFVDTVPDDVKRLYTEAATSDFAALAQTAH 68 (116)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999851999999999998669999999999
No 64
>>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypeptidases, hydrolase; 2.10A {Trypanosoma cruzi} (A:286-308,A:408-505)
Probab=28.04 E-value=37 Score=14.17 Aligned_cols=36 Identities=14% Similarity=0.289 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHH--HHHHHHCCCHHHHHHHHCHHHHH
Q ss_conf 9999999999999--99998427678999731899999
Q gi|254780815|r 101 KDFLNEARNSYEA--IVDSFFEGKVHAIEKLVDSRVYQ 136 (232)
Q Consensus 101 ~~Fl~gAk~af~~--I~~A~~~gD~~~L~~lls~~~~~ 136 (232)
..|...++..+.. +-+...+||...|+.+|.+.++.
T Consensus 47 AQl~~a~~k~~pd~~l~~~i~~Gdf~~l~~WL~enIh~ 84 (121)
T 3dwc_A 47 AQLMSCVRRELGEEVVDDCIRKGDLGKILAKQNEKIWQ 84 (121)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99999999858987605666516669999999999973
No 65
>>3hk4_A MLR7391 protein; NP_107719.1, NTF2-like protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.96A {Mesorhizobium loti} (A:)
Probab=28.02 E-value=37 Score=14.17 Aligned_cols=88 Identities=7% Similarity=0.077 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHCCC-HHHHHHHHCHHHH---------------HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCC
Q ss_conf 999999999984276-7899973189999---------------999987776443498202366200012454211346
Q gi|254780815|r 108 RNSYEAIVDSFFEGK-VHAIEKLVDSRVY---------------QDFNDSLSTRKSNEKNVKSSLVGIDDMKIINASIEE 171 (232)
Q Consensus 108 k~af~~I~~A~~~gD-~~~L~~lls~~~~---------------~~f~~~i~~r~~~~~~~~~~~v~i~~~~i~~~~~~~ 171 (232)
++..+...++|.++| ++.+..|++|++. +.+..-+.......... ..++...-.++
T Consensus 23 ~~~v~~~~~a~~~~d~~~~~~~~~~~d~~~~~p~~~~~~~~~G~~~i~~~~~~~~~~~~~~--------~~~~~~~~~~g 94 (136)
T 3hk4_A 23 AEIAKDFTELLKQGDNAGAAEKYNADDIASYEAXEGPXAVSHGKEALRQKSQWWQENHEVH--------GGSVEGPYVNG 94 (136)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHHHTEEEE--------EEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCE--------EEEEEEEEECC
T ss_conf 9999999999985998999998618868999715899753425899999999886229936--------99999999819
Q ss_pred CEEEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEE
Q ss_conf 4569999998887776676899680576578489999999996
Q gi|254780815|r 172 NTVYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVR 214 (232)
Q Consensus 172 ~~~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R 214 (232)
+.+.+..++... ...+|+.++ ....++|+|+-
T Consensus 95 d~v~~~~~~~~~-----~~~~G~~~~------~~~~~~~~~~d 126 (136)
T 3hk4_A 95 DQFALRFKFDVT-----PKATGERVT------XDEVGLYTVKN 126 (136)
T ss_dssp TEEEEEEEEEEE-----ETTTCCCEE------EEEEEEEEEET
T ss_pred CEEEEEEEEEEE-----ECCCCCEEE------EEEEEEEEEEC
T ss_conf 999999998810-----759995999------88899999989
No 66
>>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavinone, biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} (A:)
Probab=27.81 E-value=10 Score=17.72 Aligned_cols=29 Identities=14% Similarity=0.332 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999999984276789997318999
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+++..+...+||+++|.+.+..++++++
T Consensus 12 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~ 40 (153)
T 2f99_A 12 EQIAAVRRMVEAYNTGKTDDVADYIHPEY 40 (153)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 79999999999998499889998609988
No 67
>>3f8x_A Putative delta-5-3-ketosteroid isomerase; YP_050331.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043} (A:)
Probab=25.19 E-value=12 Score=17.21 Aligned_cols=28 Identities=11% Similarity=0.131 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 9999999999984276789997318999
Q gi|254780815|r 107 ARNSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 107 Ak~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.+..+....+||+.+|.+.+..++++++
T Consensus 22 ~~~~v~~~~~a~~~~D~~~~~~~~a~D~ 49 (148)
T 3f8x_A 22 VQSGLQEWHRIIAEADWERLPDLLAEDV 49 (148)
T ss_dssp HHHHHHHHHHHHHHTCGGGSGGGEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 9999999999997499989998726662
No 68
>>1zkr_A Major allergen I polypeptide, fused chain 1, chain 2; CAT allergen, uteroglobin, secretoglobin; 1.64A {Felis catus} (A:51-127)
Probab=25.08 E-value=40 Score=13.91 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHCCCHH
Q ss_conf 9999999999998427678
Q gi|254780815|r 106 EARNSYEAIVDSFFEGKVH 124 (232)
Q Consensus 106 gAk~af~~I~~A~~~gD~~ 124 (232)
.-|.||+.||.+|.++-+.
T Consensus 58 ~Ek~A~eKIQdCy~E~glk 76 (77)
T 1zkr_A 58 PERTAMKKIQDCYVENGLI 76 (77)
T ss_dssp HHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHHCCCCHH
T ss_conf 8888999999886302500
No 69
>>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} (A:198-308,A:406-481)
Probab=25.01 E-value=27 Score=15.06 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHH
Q ss_conf 999999999999999998427678999731899999
Q gi|254780815|r 101 KDFLNEARNSYEAIVDSFFEGKVHAIEKLVDSRVYQ 136 (232)
Q Consensus 101 ~~Fl~gAk~af~~I~~A~~~gD~~~L~~lls~~~~~ 136 (232)
..|...+++.+.-+-+...+||.+.|+.+|.+.++.
T Consensus 134 AQl~~a~~~~~~d~~~~i~~G~~~~i~~WL~e~Ih~ 169 (187)
T 3hq2_A 134 AQLKQKMLEDLPEFDALLERGEFHPIKQWLTEKVHI 169 (187)
T ss_dssp HHHHHHHHHHCTTHHHHHHHTCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 999999998677877777518869999999999986
No 70
>>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A (A:)
Probab=24.51 E-value=43 Score=13.77 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=15.4
Q ss_pred EECCCCHHHHHHHHH------HHHHHHHHHHHH
Q ss_conf 221267026999999------999999999998
Q gi|254780815|r 2 VFIKMDSGDFLILLF------AFITFFVFLQLR 28 (232)
Q Consensus 2 ~~~~m~~~~i~Iii~------A~IA~fl~~RLr 28 (232)
+|.|...+-|.-++| |.+.+++|||-|
T Consensus 4 v~rgltggeivavifglll~~alllg~~~fr~r 36 (38)
T 2k1k_A 4 VSRGLTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCEEHHHHHHHHHHHHHHHHHHHEECC
T ss_conf 556776763089999999999999988841012
No 71
>>3b8l_A Uncharacterized protein; YP_001165924.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.75A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=22.78 E-value=46 Score=13.56 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHC-CCHHHHHHHHCHHHHH---H-------HHHHHHHHHHCCCCCEEEE-EEHHHHHHHHHCCCCCE
Q ss_conf 999999999999842-7678999731899999---9-------9987776443498202366-20001245421134645
Q gi|254780815|r 106 EARNSYEAIVDSFFE-GKVHAIEKLVDSRVYQ---D-------FNDSLSTRKSNEKNVKSSL-VGIDDMKIINASIEENT 173 (232)
Q Consensus 106 gAk~af~~I~~A~~~-gD~~~L~~lls~~~~~---~-------f~~~i~~r~~~~~~~~~~~-v~i~~~~i~~~~~~~~~ 173 (232)
.-++.+.....|+++ +|.+.+..+.+|+..- . =..+|.++-.......... ..+.+..+ ....++.
T Consensus 29 ~I~~l~~~~~~alD~~~d~~~~~~lfteD~~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~h~~~~~~i--~~~~~d~ 106 (163)
T 3b8l_A 29 AIQDLXIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANXSHHAHYLTNFAV--TGYEGDT 106 (163)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEE--EEECSSE
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEE--EEECCCE
T ss_conf 99999999999977688899998642797599822667776554999999999874036714788505303--6746996
Q ss_pred EEEEEEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEE
Q ss_conf 69999998887776676899680576578489999999996189899866895763
Q gi|254780815|r 174 VYITIRIVGQFISASYDKDNLLISSDPEIFGKVIDIWTFVRNIPPSNPNWVLISTK 229 (232)
Q Consensus 174 ~~itV~F~~~~i~~~~d~~g~vveG~~~~~~~~~e~WtF~R~~~~~~p~W~L~~iq 229 (232)
+.....+.... .+.. .+.....-...+.|.| .+..|++..-+
T Consensus 107 A~~~~~~~~~~----~~~~------~~~~~~~g~y~~~~~r----~dg~Wki~~~~ 148 (163)
T 3b8l_A 107 ASXRAYVIGXG----VGKD------GRAVTVNGRYFFEVRR----TEKGWKATRYT 148 (163)
T ss_dssp EEEEEEEEEEE----EETT------SCEEEEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEEEEEEE----ECCC------CCEEEEEEEEEEEEEE----ECCEEEEEEEE
T ss_conf 99999999999----9589------9589999999999999----99998999999
No 72
>>1m98_A Orange carotenoid protein; carotenoid binding protein, unknown function; HET: SUC HEQ; 2.10A {Arthrospira maxima} (A:180-317)
Probab=22.75 E-value=24 Score=15.32 Aligned_cols=26 Identities=8% Similarity=0.072 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999984276789997318999
Q gi|254780815|r 109 NSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 109 ~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
+..+...+||+++|.+.+-.+.++++
T Consensus 19 ~~v~~~~~a~~~~D~~~~~~~~~~D~ 44 (138)
T 1m98_A 19 STVLQYMDNLNANDFDNLISLFAEDG 44 (138)
T ss_dssp HHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 89999999874689999999846685
No 73
>>3flj_A Uncharacterized protein conserved in bacteria with A cystatin-like fold; YP_168589.1, structural genomics; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3} (A:)
Probab=21.59 E-value=26 Score=15.16 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHCHHH
Q ss_conf 99999999984276789997318999
Q gi|254780815|r 109 NSYEAIVDSFFEGKVHAIEKLVDSRV 134 (232)
Q Consensus 109 ~af~~I~~A~~~gD~~~L~~lls~~~ 134 (232)
.......+||+++|++.+..++++++
T Consensus 22 ~~v~~~~~a~~~~D~d~~~~~~a~d~ 47 (155)
T 3flj_A 22 PTIARXQEVVAKGDESLIHALLAEDV 47 (155)
T ss_dssp HHHHHHHHHHTTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 89999999997699999998736781
No 74
>>3iqt_A Signal transduction histidine-protein kinase BARA; histidine phosphotransfer domain, HTP, structural genomics, PSI-2; HET: MSE BTB; 1.40A {Escherichia coli CFT073} (A:)
Probab=20.83 E-value=50 Score=13.30 Aligned_cols=51 Identities=4% Similarity=0.098 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC----------HHHHHHHHHHHHHHHHCCC
Q ss_conf 89999999999999999984276789997318----------9999999987776443498
Q gi|254780815|r 100 PKDFLNEARNSYEAIVDSFFEGKVHAIEKLVD----------SRVYQDFNDSLSTRKSNEK 150 (232)
Q Consensus 100 ~~~Fl~gAk~af~~I~~A~~~gD~~~L~~lls----------~~~~~~f~~~i~~r~~~~~ 150 (232)
...|++........|.+|+.++|.+.++..+. -.-.......|...-..+.
T Consensus 35 l~~f~~~~~~~l~~l~~a~~~~d~~~l~~~aH~lkGsa~~lG~~~l~~~a~~lE~~~~~~~ 95 (123)
T 3iqt_A 35 LQXLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRXKNLCQLIEQQLRSGT 95 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999987189999999998866899999999999999986139999999999999988799
Done!