RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780816|ref|YP_003065229.1| hypothetical protein
CLIBASIA_03535 [Candidatus Liberibacter asiaticus str. psy62]
         (63 letters)



>gnl|CDD|150787 pfam10154, DUF2362, Uncharacterized conserved protein (DUF2362).
           This is a family of proteins conserved from nematodes to
           humans. The function is not known.
          Length = 501

 Score = 25.9 bits (57), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 1   MFEIFEIHVYFQRKSIFNL 19
           + E F IH+  Q K++ NL
Sbjct: 227 LEESFTIHLGSQLKTMHNL 245


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.331    0.141    0.418 

Gapped
Lambda     K      H
   0.267   0.0670    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 933,584
Number of extensions: 39633
Number of successful extensions: 103
Number of sequences better than 10.0: 1
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 6
Length of query: 63
Length of database: 5,994,473
Length adjustment: 35
Effective length of query: 28
Effective length of database: 5,238,193
Effective search space: 146669404
Effective search space used: 146669404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 50 (23.2 bits)