RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780816|ref|YP_003065229.1| hypothetical protein CLIBASIA_03535 [Candidatus Liberibacter asiaticus str. psy62] (63 letters) >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Score = 25.5 bits (55), Expect = 3.1 Identities = 8/15 (53%), Positives = 9/15 (60%) Query: 45 ETEQKDQRWKKNKSK 59 E K +R KK KSK Sbjct: 32 EEAAKKKRRKKKKSK 46 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.331 0.141 0.418 Gapped Lambda K H 0.267 0.0450 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 511,496 Number of extensions: 16182 Number of successful extensions: 32 Number of sequences better than 10.0: 1 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 2 Length of query: 63 Length of database: 5,693,230 Length adjustment: 34 Effective length of query: 29 Effective length of database: 4,868,934 Effective search space: 141199086 Effective search space used: 141199086 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 50 (23.7 bits)