HHsearch alignment for GI: 254780817 and conserved domain: COG1952

Probab=100.00  E-value=0  Score=312.35  Aligned_cols=144  Identities=38%  Similarity=0.732  Sum_probs=138.5

Q ss_pred             CCCCCHHHHEEEHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEE
Q ss_conf             13010123013011103788716776431015841588865121214654057999984046766543012577546899
Q gi|254780817|r    5 QKQAFTILNQYIKDFSFESPNAPHCFFDIQNQQPTIKINVQVNANTISGADFDVILSFDIEAKNNDKVIFRLELAYSGIL   84 (152)
Q Consensus         5 ~~~~~~I~~qYIKDLSFE~P~ap~~f~~~~~~~p~~~i~i~i~~~~l~~~~~EV~l~l~~~ak~~~~~~f~~Ei~yagif   84 (152)
T Consensus         9 ~qp~~~I~~~YvKDlSFE~P~aP~~f~--~~~~P~i~l~l~~~~~~l~e~~feVvL~itv~ak~~~~~~F~~Ev~qaGvF   86 (157)
T COG1952           9 GQPSFNIQRIYVKDLSFEAPNAPHIFQ--KDWQPEVNLDLNTNANQLAENVFEVVLTVTVTAKLGEKTAFLCEVQQAGIF   86 (157)
T ss_pred             CCCEEEEEEEEEEEEEEECCCCCHHHH--HCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCEEEEEEEEEEEEEE
T ss_conf             996476311263333230799966667--503976156205021326887269999999999708726899999875589


Q ss_pred             EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             975887103444666304553417899999999973899886605539899999999999864201
Q gi|254780817|r   85 RILDCPQEHISQILFVECPQLLFPFVRQIISNTIRDGGFPPLVIDTIDFLKLFQQEKSLIKNKEGL  150 (152)
Q Consensus        85 ~i~~~~~~~l~~illv~~P~~lfP~~R~ii~~~~~~~Gfp~l~l~~IdF~~LY~~~~~~~~~~~~~  150 (152)
T Consensus        87 ~i~~i~~e~m~~~L~i~CP~iLFPYaR~~Is~~t~~ggFPpl~L~PInF~aly~~~~~e~~~~e~~  152 (157)
T COG1952          87 RIAGIPEEQMAHLLGIECPNILFPYARELISDLTARGGFPPLMLAPINFDALYAQRLAEQQAEEVA  152 (157)
T ss_pred             EECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             971788788665564368343517799999888632898960128727899999999999887543