HHSEARCH alignment of GI: 254780817 and SCOP domain: d1qyna_

Alignment
>d1qyna_ d.33.1.1 (A:) Bacterial protein-export protein SecB {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=312.68  Aligned_cols=134  Identities=30%  Similarity=0.598  Sum_probs=129.4

Q ss_pred             CCCHHHHEEEHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEE
Q ss_conf             01012301301110378871677643101584158886512121465405799998404676654301257754689997
Q gi|254780817|r    7 QAFTILNQYIKDFSFESPNAPHCFFDIQNQQPTIKINVQVNANTISGADFDVILSFDIEAKNNDKVIFRLELAYSGILRI   86 (152)
Q Consensus         7 ~~~~I~~qYIKDLSFE~P~ap~~f~~~~~~~p~~~i~i~i~~~~l~~~~~EV~l~l~~~ak~~~~~~f~~Ei~yagif~i   86 (152)
                      |+|+|+++||||||||+|++|++|.  .+|.|++++++|+++++++++.|||.|+++++++.+++++|++|++|||+|++
T Consensus         1 m~f~I~~~YiKDlSFE~P~~~~~f~--~~~~p~~~i~~~i~~~~~~~~~~Ev~l~l~~~~k~~~~~~f~~Ev~yagvf~i   78 (134)
T d1qyna_           1 MTFQIQRIYTKDISFEAPNAPHVFQ--KDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSI   78 (134)
T ss_dssp             CEEEEEEEEEEEEEEECTTHHHHTT--SCCCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred             CEEEEEEEEEECCCCCCCCCHHHHC--CCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEE
T ss_conf             9679988998503543899805637--57798458988505421578779999999999835885146899999999999


Q ss_pred             CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58871034446663045534178999999999738998866055398999999999
Q gi|254780817|r   87 LDCPQEHISQILFVECPQLLFPFVRQIISNTIRDGGFPPLVIDTIDFLKLFQQEKS  142 (152)
Q Consensus        87 ~~~~~~~l~~illv~~P~~lfP~~R~ii~~~~~~~Gfp~l~l~~IdF~~LY~~~~~  142 (152)
                      .+.++++++++|+|+||++||||||++|++++++|||||++|+||||++||++|++
T Consensus        79 ~~~~~~~~~~il~i~~P~~lfP~~R~ii~~l~~~gGfppl~L~pIdF~~Ly~~~~~  134 (134)
T d1qyna_          79 AGIEGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQ  134 (134)
T ss_dssp             ESCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCHHHHHHHHHC
T ss_pred             EECCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
T ss_conf             50661442000221573888789999999999846999856687589999998619


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: SecB-like
superfamily: SecB-like
family: Bacterial protein-export protein SecB
domain: Bacterial protein-export protein SecB
species: Escherichia coli [TaxId: 562]