HHsearch alignment for GI: 254780818 and conserved domain: COG2925
>COG2925 SbcB Exonuclease I [DNA replication, recombination, and repair].
Probab=99.44 E-value=2.3e-13 Score=103.46 Aligned_cols=174 Identities=19% Similarity=0.219 Sum_probs=113.4
Q ss_pred CCCEEEEECCCCCCCCCCCEEEEEEEEEEE-CCEECCCEEEEEECCCC-CCCCHHHEEECCCCCCCCC-CCCCCCHHHHH
Q ss_conf 775899984678888888889999999999-99880313798985888-2288657242021012322-48521002344
Q gi|254780818|r 6 KMRKIVFDIETTGLDSKNDRIIEIGAVELL-DYSKTNRTFQVFLCPNG-RKNSPEALKLHGITDEFLK-DKPSFSSIFSE 82 (245)
Q Consensus 6 ~mr~iv~D~ETTGl~~~~d~Iieigav~i~-~~~~~~~~f~~~i~P~~-~~i~~~~~~ihGIt~~~l~-~~p~f~ev~~~ 82 (245)
T Consensus 8 ~~tF~~yDYETfG~~Pa~DRPaQFAgIRTD~~~NiIgeP~~fyCkpsdDyLP~P~a~LITGITPQ~~~~~Gi~E~~F~~~ 87 (475)
T COG2925 8 QPTFLFYDYETFGVHPALDRPAQFAGIRTDIEFNIIGEPIVFYCKPADDYLPQPGAVLITGITPQEAREKGINEAAFAAR 87 (475)
T ss_pred CCCEEEEECHHCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHH
T ss_conf 98679975033177856666135411210343432478727985475456899873666257878897648985899999
Q ss_pred HHHHHHCCCCEEEEEC-CCCCCCEEEECHHCCCCC-----CCCCCHHCCCHHCCCC---------CCC----C-CCCCHH
Q ss_conf 7775300232023102-322431121000001122-----2210000110000000---------177----6-422237
Q gi|254780818|r 83 FWDFFNEQNAEWIAHN-AKFDVGFINAELQRINKD-----PLDPSRIIDTLSIARR---------KHP----S-SRNDLN 142 (245)
Q Consensus 83 f~~fi~~~~~~lVaHN-a~FD~~fL~~el~r~~~~-----~~~~~~~iDTl~lar~---------~~p----~-~~~~L~ 142 (245)
T Consensus 88 I~~~ls~P~Tcv~GYNniRfDDEvtRy~fyRNF~DPYa~sWqngNSRWDLLD~~RacyALRPeGI~Wp~n~dG~pSFkLE 167 (475)
T COG2925 88 IHAELTQPNTCVLGYNNIRFDDEVTRYIFYRNFYDPYAWSWQNGNSRWDLLDVVRACYALRPEGINWPENDDGLPSFKLE 167 (475)
T ss_pred HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99985799815623555333268898889872276666761389842579999999975285568788678897511068
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 89997187545556664026999999999999730576666
Q gi|254780818|r 143 SLCKRYGITISHRSKHGALLDSHLLSDVYIKMMVGGSQINF 183 (245)
Q Consensus 143 ~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~ll~g~~q~~l 183 (245)
T Consensus 168 hLtkANgie--H~nAHdAmsDVyATIamAk--lvk~~QPrL 204 (475)
T COG2925 168 HLTKANGIE--HSNAHDAMSDVYATIAMAK--LVKTAQPRL 204 (475)
T ss_pred HHHHCCCCC--CCHHHHHHHHHHHHHHHHH--HHHHHCCHH
T ss_conf 776425611--0005678899999999999--987618479