HHsearch alignment for GI: 254780818 and conserved domain: PRK05168
>PRK05168 ribonuclease T; Provisional.
Probab=100.00 E-value=0 Score=322.68 Aligned_cols=177 Identities=27% Similarity=0.450 Sum_probs=151.4
Q ss_pred CCCCCEEEEECCCCCCCCCCCEEEEEEEEEEE---C-CEECCCEEEEEECCC-CCCCCHHHEEECCCC-CCCCCCCCCCC
Q ss_conf 67775899984678888888889999999999---9-988031379898588-822886572420210-12322485210
Q gi|254780818|r 4 KNKMRKIVFDIETTGLDSKNDRIIEIGAVELL---D-YSKTNRTFQVFLCPN-GRKNSPEALKLHGIT-DEFLKDKPSFS 77 (245)
Q Consensus 4 ~~~mr~iv~D~ETTGl~~~~d~Iieigav~i~---~-~~~~~~~f~~~i~P~-~~~i~~~~~~ihGIt-~~~l~~~p~f~ 77 (245)
T Consensus 14 fr~~~pVV~D~ETTGl~p~~D~IIEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~~~ 93 (213)
T PRK05168 14 FRGFLPVVIDVETAGFNAQTDALLEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVSEK 93 (213)
T ss_pred HCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 55888759983079988778855888889988637886724754889878887887886675112678653222366678
Q ss_pred HHHHHHHHHHHC-------CCCEEEEECCCCCCCEEEECHHCCCCCCC--CCCHHCCCHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 023447775300-------23202310232243112100000112222--100001100000001776422237899971
Q gi|254780818|r 78 SIFSEFWDFFNE-------QNAEWIAHNAKFDVGFINAELQRINKDPL--DPSRIIDTLSIARRKHPSSRNDLNSLCKRY 148 (245)
Q Consensus 78 ev~~~f~~fi~~-------~~~~lVaHNa~FD~~fL~~el~r~~~~~~--~~~~~iDTl~lar~~~p~~~~~L~~l~~~~ 148 (245)
T Consensus 94 ~al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~~--~~~L~~lc~~~ 171 (213)
T PRK05168 94 EALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAYG--QTVLAKACQAA 171 (213)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHC--CCCHHHHHHHC
T ss_conf 8789999999999875046756377634187499999999984997788887763358998688748--74099999986
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8754555666402699999999999973057666
Q gi|254780818|r 149 GITISHRSKHGALLDSHLLSDVYIKMMVGGSQIN 182 (245)
Q Consensus 149 ~i~~~~r~~H~Al~Da~~~a~v~~~ll~g~~q~~ 182 (245)
T Consensus 172 gi~~~~~~~HrAl~DA~~tA~vFl~ll~~l~~~g 205 (213)
T PRK05168 172 GIEFDNKEAHSALYDTEKTAELFCEIVNRWKRLG 205 (213)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999997777738999999999999999999738