HHsearch alignment for GI: 254780818 and conserved domain: PRK05168

>PRK05168 ribonuclease T; Provisional.
Probab=100.00  E-value=0  Score=322.68  Aligned_cols=177  Identities=27%  Similarity=0.450  Sum_probs=151.4

Q ss_pred             CCCCCEEEEECCCCCCCCCCCEEEEEEEEEEE---C-CEECCCEEEEEECCC-CCCCCHHHEEECCCC-CCCCCCCCCCC
Q ss_conf             67775899984678888888889999999999---9-988031379898588-822886572420210-12322485210
Q gi|254780818|r    4 KNKMRKIVFDIETTGLDSKNDRIIEIGAVELL---D-YSKTNRTFQVFLCPN-GRKNSPEALKLHGIT-DEFLKDKPSFS   77 (245)
Q Consensus         4 ~~~mr~iv~D~ETTGl~~~~d~Iieigav~i~---~-~~~~~~~f~~~i~P~-~~~i~~~~~~ihGIt-~~~l~~~p~f~   77 (245)
T Consensus        14 fr~~~pVV~D~ETTGl~p~~D~IIEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~~~   93 (213)
T PRK05168         14 FRGFLPVVIDVETAGFNAQTDALLEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVSEK   93 (213)
T ss_pred             HCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHH
T ss_conf             55888759983079988778855888889988637886724754889878887887886675112678653222366678


Q ss_pred             HHHHHHHHHHHC-------CCCEEEEECCCCCCCEEEECHHCCCCCCC--CCCHHCCCHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf             023447775300-------23202310232243112100000112222--100001100000001776422237899971
Q gi|254780818|r   78 SIFSEFWDFFNE-------QNAEWIAHNAKFDVGFINAELQRINKDPL--DPSRIIDTLSIARRKHPSSRNDLNSLCKRY  148 (245)
Q Consensus        78 ev~~~f~~fi~~-------~~~~lVaHNa~FD~~fL~~el~r~~~~~~--~~~~~iDTl~lar~~~p~~~~~L~~l~~~~  148 (245)
T Consensus        94 ~al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~~--~~~L~~lc~~~  171 (213)
T PRK05168         94 EALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAYG--QTVLAKACQAA  171 (213)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHC--CCCHHHHHHHC
T ss_conf             8789999999999875046756377634187499999999984997788887763358998688748--74099999986


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             8754555666402699999999999973057666
Q gi|254780818|r  149 GITISHRSKHGALLDSHLLSDVYIKMMVGGSQIN  182 (245)
Q Consensus       149 ~i~~~~r~~H~Al~Da~~~a~v~~~ll~g~~q~~  182 (245)
T Consensus       172 gi~~~~~~~HrAl~DA~~tA~vFl~ll~~l~~~g  205 (213)
T PRK05168        172 GIEFDNKEAHSALYDTEKTAELFCEIVNRWKRLG  205 (213)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999997777738999999999999999999738