HHsearch alignment for GI: 254780818 and conserved domain: PRK06722
>PRK06722 exonuclease; Provisional.
Probab=99.94 E-value=6.2e-28 Score=194.52 Aligned_cols=128 Identities=18% Similarity=0.244 Sum_probs=111.4
Q ss_pred CEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCC
Q ss_conf 13798985888228865724202101232248521002344777530023202310232243112100000112222100
Q gi|254780818|r 42 RTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPS 121 (245)
Q Consensus 42 ~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~ 121 (245)
T Consensus 5 ~rFstLVNPg-~pIp~~It~LTGITdeMV~~aP~ieeVLp~FleFIG--d~~LVAHNAsFD~gFL~~~C~~hg~e~P~-~ 80 (242)
T PRK06722 5 GEFSELVKPG-ARLTRHTTKLTGITKKDLIGVEKFPQIIEKFIQFIG--EDSIFVTWGKEDYRFLSHDCTLHGVECPC-M 80 (242)
T ss_pred HHHHHHCCCC-CCCCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHHHHCCCCCCC-C
T ss_conf 8888651989-999833565338688998279978999999999827--88389734402277999775242899999-8
Q ss_pred HHCCCHHCCCCCC-C-----CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0011000000017-7-----642223789997187545556664026999999999999
Q gi|254780818|r 122 RIIDTLSIARRKH-P-----SSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKM 174 (245)
Q Consensus 122 ~~iDTl~lar~~~-p-----~~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~l 174 (245)
T Consensus 81 ~~~~~~dl~k~v~~~~~el~~h~ps~~~A~~q~~~t~~~-~~HRAlaDA~~T~ni~l~v 138 (242)
T PRK06722 81 EKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEG-KQHRALADAENTANILLKA 138 (242)
T ss_pred CCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf 421088899998631244321380299999998502567-0367787688889999997