HHsearch alignment for GI: 254780818 and conserved domain: PRK10829
>PRK10829 ribonuclease D; Provisional.
Probab=96.50 E-value=0.021 Score=34.96 Aligned_cols=136 Identities=18% Similarity=0.203 Sum_probs=81.5
Q ss_pred CEEEEECCCCCCCCCCCE--EEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 589998467888888888--999999999999880313798985888228865724202101232248521002344777
Q gi|254780818|r 8 RKIVFDIETTGLDSKNDR--IIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWD 85 (245)
Q Consensus 8 r~iv~D~ETTGl~~~~d~--Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~ 85 (245)
T Consensus 23 ~~iavDTEf~r~~ty~p~l~LiQi~-----~----~~~-~~lIDpl--~~~d----------------------l~~l~~ 68 (373)
T PRK10829 23 PAIALDTEFVRTRTYYPQLGLIQLF-----D----GEQ-LALIDPL--GITD----------------------WSPFKA 68 (373)
T ss_pred CCEEEECCCCCCCCCCCEEEEEEEE-----E----CCC-EEEEECC--CCCC----------------------HHHHHH
T ss_conf 9189857745677789845899985-----1----896-7999478--7777----------------------699999
Q ss_pred HHHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCCCCHHHHHHH-HCCCCCC----------
Q ss_conf 53002320231023224311210000011222210000110000000177642223789997-1875455----------
Q gi|254780818|r 86 FFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKR-YGITISH---------- 154 (245)
Q Consensus 86 fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~~~L~~l~~~-~~i~~~~---------- 154 (245)
T Consensus 69 ll~~~~i~kv~Haa~qDle~l~~---~~g~~---p~~iFDTQiAa~~lg~~~~~gy~~Lv~~~l~v~l~K~~~~sDW~~R 142 (373)
T PRK10829 69 LLRDPSITKFLHAGSEDLEVFLN---AFGEL---PQPLIDTQILAAFCGRPLSWGFASMVEEYSGVALDKSESRTDWLAR 142 (373)
T ss_pred HHCCCCCEEEEECCCCHHHHHHH---HCCCC---CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 97098841652064215999999---81988---7407764889986578655589999999939665666462757889
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf ----56664026999999999999730576666
Q gi|254780818|r 155 ----RSKHGALLDSHLLSDVYIKMMVGGSQINF 183 (245)
Q Consensus 155 ----r~~H~Al~Da~~~a~v~~~ll~g~~q~~l 183 (245)
T Consensus 143 PLs~~ql~YA~~DV~yL~~l~~~L~~~l~~~~r 175 (373)
T PRK10829 143 PLSERQCEYAAADVWYLLPIAAKLMVETEAAGW 175 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999899999999999999999999999983575