>TIGR01407 dinG_rel DnaQ family exonuclease/DinG family helicase, putative; InterPro: IPR006310 These are a family of proteins in Gram-positive bacteria. The N-terminal region of about 200 amino acids resembles the epsilon subunit of E. coli DNA polymerase III and the homologous region of the Gram-positive type DNA polymerase III alpha subunit. The epsilon subunit contains an exonuclease domain. The remainder of this protein family resembles a predicted ATP-dependent helicase, the DNA damage-inducible protein DinG of Escherichia coli. .

Probab=100.00 E-value=0 Score=317.25 Aligned_cols=167 Identities=33% Similarity=0.503 Sum_probs=152.1 Q ss_pred CEEEEECCCCCCCCCC-CEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 5899984678888888-889999999999998803137989858882288657242021012322485210023447775 Q gi|254780818|r 8 RKIVFDIETTGLDSKN-DRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDF 86 (245) Q Consensus 8 r~iv~D~ETTGl~~~~-d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~f 86 (245) T Consensus 1 rYaVVDLEtTg~~~~~~d~IIqiGiV~v~DgeIv-~~f~T~VNP~-~~~pp~I~eLTGisd~~l~~AP~F~qVA~~i~~~ 78 (944) T TIGR01407 1 RYAVVDLETTGTDSSEFDKIIQIGIVLVEDGEIV-DTFATDVNPN-EPIPPFIQELTGISDEQLKQAPYFSQVAQEIYDL 78 (944) T ss_pred CEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEE-EECCCCCCCC-CCCCCHHHHHCCCCHHHHCCCCCHHHHHHHHHHH T ss_conf 9689987416888645576689988998558143-2012677889-8776114542287768640488887999999987 Q ss_pred HHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCC-CCCCHHHHHHHHCCCCCCCCCCCCHHHHH Q ss_conf 30023202310232243112100000112222100001100000001776-42223789997187545556664026999 Q gi|254780818|r 87 FNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPS-SRNDLNSLCKRYGITISHRSKHGALLDSH 165 (245) Q Consensus 87 i~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~-~~~~L~~l~~~~~i~~~~r~~H~Al~Da~ 165 (245) T Consensus 79 l--~D~iFVAHNV~FD~nfL~k~l~~~G~~~~-~~~~iDTVELa~if~PT~esY~Ls~L~E~LGl~h~n--pH~AdSDA~ 153 (944) T TIGR01407 79 L--EDGIFVAHNVHFDLNFLAKELVDEGYEPL-EVPRIDTVELARIFFPTEESYKLSELSEELGLEHEN--PHRADSDAQ 153 (944) T ss_pred H--CCCEEEEECHHCCHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC--CCCCCHHHH T ss_conf 4--29727761015067899999985689743-435200567998746744355614899971987146--676105789 Q ss_pred HHHHHHHHHHHCCCCC Q ss_conf 9999999997305766 Q gi|254780818|r 166 LLSDVYIKMMVGGSQI 181 (245) Q Consensus 166 ~~a~v~~~ll~g~~q~ 181 (245) T Consensus 154 ~TAeLLLl~~~K~~~L 169 (944) T TIGR01407 154 VTAELLLLLEEKMKKL 169 (944) T ss_pred HHHHHHHHHHHHHHHH T ss_conf 9999999999998751

HHsearch alignment for GI: 254780818 and conserved domain: TIGR01407