HHsearch alignment for GI: 254780818 and conserved domain: cd00007

>cd00007 35EXOc 3'-5' exonuclease. The 35EXOc domain is responsible for the 3'-5' exonuclease proofreading activity of prokaryotic DNA polymerase I (pol I) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the Klenow fragment in E. coli pol I. 35EXOc is also found in the Werner syndrome helicase (WRN), focus forming activity 1 protein (FFA-1) and ribonuclease D (RNase D).
Probab=99.06  E-value=1.4e-09  Score=79.79  Aligned_cols=133  Identities=22%  Similarity=0.354  Sum_probs=85.0

Q ss_pred             CEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58999846788888888899999999999988031379898588822886572420210123224852100234477753
Q gi|254780818|r    8 RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWDFF   87 (245)
Q Consensus         8 r~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~fi   87 (245)
T Consensus         1 ~~ia~D~Et~~l~~~~~~i~~iql~-~~-----~~~~--yi~~~~-~~---------------------~~~~~~l~~~l   50 (155)
T cd00007           1 KEVAFDTETTGLNYHRGKLVGIQIA-TA-----GEAA--YIPDEL-EL---------------------EEDLEALKELL   50 (155)
T ss_pred             CEEEEECCCCCCCCCCCCEEEEEEE-EC-----CCEE--EEEECC-CC---------------------HHHHHHHHHHH
T ss_conf             9899989879997788809999999-89-----9359--998147-55---------------------24699999998


Q ss_pred             HCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCC-CCCHHHHHHHHC-CCCCC-----------
Q ss_conf             00232023102322431121000001122221000011000000017764-222378999718-75455-----------
Q gi|254780818|r   88 NEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSS-RNDLNSLCKRYG-ITISH-----------  154 (245)
Q Consensus        88 ~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~-~~~L~~l~~~~~-i~~~~-----------  154 (245)
T Consensus        51 ~~~~i~Kv~hn~k~D~~~L~~----~~~~~--~~~~~Dt~iaa~ll~~~~~~~~L~~l~~~~l~~~~~k~~~~~~~~~~~  124 (155)
T cd00007          51 EDEDITKVGHDAKFDLVVLAR----DGIEL--PGNIFDTMLAAYLLNPGEGSHSLDDLAKEYLGIELDKDEQIYGKGAKT  124 (155)
T ss_pred             HCCCCCEEEECCCHHHHHHHH----CCCCC--CCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCC
T ss_conf             299973898734000999986----28601--350114999999847785523699999998398767488861776544


Q ss_pred             -------CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             -------5666402699999999999973
Q gi|254780818|r  155 -------RSKHGALLDSHLLSDVYIKMMV  176 (245)
Q Consensus       155 -------r~~H~Al~Da~~~a~v~~~ll~  176 (245)
T Consensus       125 ~~~~l~~~~~~YAa~D~~~~~~l~~~l~~  153 (155)
T cd00007         125 FARPLSEELLEYAAEDADALLRLYEKLLE  153 (155)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             44799899999999999999999999996