HHsearch alignment for GI: 254780818 and conserved domain: cd06148

>cd06148 Egl_like_exo The Egalitarian (Egl) protein subfamily is composed of Drosophila Egl and similar proteins. Egl is a component of an mRNA-binding complex which is required for oocyte specification. Egl contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. The motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The conservation of this subfamily throughout eukaryotes suggests that its members may be part of ancient RNA processing complexes that are likely to participate in the regulated processing of specific mRNAs.
Probab=97.55  E-value=0.00063  Score=44.49  Aligned_cols=133  Identities=18%  Similarity=0.224  Sum_probs=73.6

Q ss_pred             CCEEEEECCCCCCCCCCCE--EEEEEEEEEECCEECCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             7589998467888888888--99999999999988031379898588822886572420210123224852100234477
Q gi|254780818|r    7 MRKIVFDIETTGLDSKNDR--IIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFW   84 (245)
Q Consensus         7 mr~iv~D~ETTGl~~~~d~--Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~   84 (245)
T Consensus        10 ~~vi~iD~E~~~~~~~-g~l~LiQiat---~----~~~vy--l~D~~--~~~~----------------~~~~~~Lk~iL   61 (197)
T cd06148          10 QKVIGLDCEGVNLGRK-GKLCLVQIAT---R----TGQIY--LFDIL--KLGS----------------IVFINGLKDIL   61 (197)
T ss_pred             CCEEEEECCCCCCCCC-CCEEEEEEEE---C----CCCEE--EEECC--CCCC----------------HHHHHHHHHHH
T ss_conf             9999998886788989-9887999964---8----99889--99616--6763----------------44568999995


Q ss_pred             HHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCC--------CCCCCCCCCHHHHHHHH-CCC----
Q ss_conf             75300232023102322431121000001122221000011000000--------01776422237899971-875----
Q gi|254780818|r   85 DFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIAR--------RKHPSSRNDLNSLCKRY-GIT----  151 (245)
Q Consensus        85 ~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar--------~~~p~~~~~L~~l~~~~-~i~----  151 (245)
T Consensus        62 e---~~~I~KV~H~~r~D~~~L~~~---~gi~---~~nvfDTqiA~~ll~~~~~~~~~~~~~~sl~~l~~~~l~~~~~~~  132 (197)
T cd06148          62 E---SKKILKVIHDCRRDSDALYHQ---YGIK---LNNVFDTQVADALLQEQETGGFNPDRVISLVQLLDKYLYISISLK  132 (197)
T ss_pred             C---CCCCEEEEECHHHHHHHHHHH---HCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHH
T ss_conf             6---998239996109999999997---0997---067031999999975313147677564159999999957640177


Q ss_pred             ------------------CCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             ------------------4555666402699999999999973
Q gi|254780818|r  152 ------------------ISHRSKHGALLDSHLLSDVYIKMMV  176 (245)
Q Consensus       152 ------------------~~~r~~H~Al~Da~~~a~v~~~ll~  176 (245)
T Consensus       133 ~~~~~~~~~~~s~W~~RPLt~~ql~YAa~DV~yL~~L~~~L~~  175 (197)
T cd06148         133 EDVKKLMREDPKFWALRPLTEDMIRYAALDVLCLLPLYYAMLD  175 (197)
T ss_pred             HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8778887506554467999999999999989999999999999