HHsearch alignment for GI: 254780818 and conserved domain: smart00474
>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=98.75 E-value=3.3e-08 Score=71.25 Aligned_cols=132 Identities=24% Similarity=0.357 Sum_probs=82.3
Q ss_pred CCEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEE-CCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 758999846788888888899999999999988031379898-5888228865724202101232248521002344777
Q gi|254780818|r 7 MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFL-CPNGRKNSPEALKLHGITDEFLKDKPSFSSIFSEFWD 85 (245)
Q Consensus 7 mr~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i-~P~~~~i~~~~~~ihGIt~~~l~~~p~f~ev~~~f~~ 85 (245)
T Consensus 21 ~~~i~~DtE~~~~~~~~~~l~~iql~-~-~----~~--~~yi~~~~--~~~---------------------~~~~~l~~ 69 (172)
T smart00474 21 GGEVALDTETTGLNSYSGKLVLIQIS-V-T----GE--GAFIIDPL--ALG---------------------DDLEILKD 69 (172)
T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEE-E-C----CC--EEEEEECC--CCH---------------------HHHHHHHH
T ss_conf 99599988306885378758999999-6-8----98--48997012--242---------------------17999999
Q ss_pred HHHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCC-CCCHHHHHHHH-CCCCCC---------
Q ss_conf 5300232023102322431121000001122221000011000000017764-22237899971-875455---------
Q gi|254780818|r 86 FFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSS-RNDLNSLCKRY-GITISH--------- 154 (245)
Q Consensus 86 fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~-~~~L~~l~~~~-~i~~~~--------- 154 (245)
T Consensus 70 ll~~~~i~kv~hn~k~D~~~L~----~~gi~l---~~v~Dt~ia~~l~~~~~~~~~L~~l~~~~~~~~l~k~~~~~~w~~ 142 (172)
T smart00474 70 LLEDETITKVGHNAKFDLHVLA----RFGIEL---ENIFDTMLAAYLLLGGPSKHGLATLLKEYLGVELDKEEQKSDWGA 142 (172)
T ss_pred HHCCCCCCEEEECHHHHHHHHH----HCCCCC---CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCC
T ss_conf 9809998599974599999999----779856---752467998775057986489999999974923155556466678
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----5666402699999999999973
Q gi|254780818|r 155 -----RSKHGALLDSHLLSDVYIKMMV 176 (245)
Q Consensus 155 -----r~~H~Al~Da~~~a~v~~~ll~ 176 (245)
T Consensus 143 rpl~~~~~~YAa~Da~~~~~l~~~l~~ 169 (172)
T smart00474 143 RPLSEEQLQYAAEDADALLRLYEKLEK 169 (172)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999099999999999999999999999