HHsearch results for GI: 254780818 and protein with PDBid: 1bgx_T

>1bgx_T TAQ DNA polymerase; DNA polymerase, FAB, PCR, inhibition, helix-coil dynamics, inhibitor design, complex (polymerase/inhibitor); 2.30A {Thermus aquaticus} SCOP: a.60.7.1 c.120.1.2 c.55.3.5 e.8.1.1 PDB: 1cmw_A 1tau_A* 1taq_A*

Probab=92.29  E-value=0.078  Score=30.08  Aligned_cols=72  Identities=15%  Similarity=0.079  Sum_probs=53.1

Q ss_pred             EEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             23102322431121000001122221000011000000017764222378999718754555666402699999999999
Q gi|254780818|r   94 WIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIK  173 (245)
Q Consensus        94 lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~~H~Al~Da~~~a~v~~~  173 (245)
                      -+.||..||+.+|.   .+.|...   ..+.||+.++...-|+ +++++.+.++|.-..    ..-|..||.+|.++|..
T Consensus       347 k~~~~lk~d~~vl~---~~~gi~~---~~~~DtmiaayLl~p~-~~~~~~l~~~~~~e~----~eYa~~Da~~t~~L~~~  415 (832)
T 1bgx_T          347 EARGLLAKDLSVLA---LREGLGL---PPGDDPMLLAYLLDPS-NTTPEGVARRYGGEW----TEEAGERAALSERLFAN  415 (832)
T ss_dssp             SBCBTTHHHHHHHH---HHHTCCC---CBCCCHHHHHHHHCTT-CCSTTHHHHHHSCCC----CSSHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCHHHHH---HHHHHCC---CHHHHHHHHHHHHCCC-CCCHHHHHHHHCCCC----HHHHHHHHHHHHHHHHH
T ss_conf             86244300399986---4101124---4002599999986477-868067777625441----57799999999999999


Q ss_pred             HHH
Q ss_conf             973
Q gi|254780818|r  174 MMV  176 (245)
Q Consensus       174 ll~  176 (245)
                      |..
T Consensus       416 L~~  418 (832)
T 1bgx_T          416 LWG  418 (832)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999