HHsearch results for GI: 254780818 and protein with PDBid: 1vk0_A
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, structural genomics, protein structure initiative, center for eukaryotic structural genomics; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=95.91 E-value=0.0026 Score=39.26 Aligned_cols=90 Identities=11% Similarity=0.208 Sum_probs=61.0
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCC---CCCCHHHHHHHH-CCCCCC-
Q ss_conf 344777530023202310232243112100000112222100001100000001776---422237899971-875455-
Q gi|254780818|r 80 FSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPS---SRNDLNSLCKRY-GITISH- 154 (245)
Q Consensus 80 ~~~f~~fi~~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~---~~~~L~~l~~~~-~i~~~~- 154 (245)
.+.+.+|+....-+.||||+..|+..|.+. +|.. ...++|+-.++...... .+.+|..|++.+ |+.+..
T Consensus 97 ~~~L~~~L~~~~i~KVG~~i~~D~~~L~~~---~gi~---~~~~vDl~~~a~~~~~~~~~~~~~l~~L~~~~lg~~l~K~ 170 (206)
T 1vk0_A 97 LKDLYRFFASKFVTFVGVQIEEDLDLLREN---HGLV---IRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQL 170 (206)
T ss_dssp GHHHHHHHTCSSSEEEESSCHHHHHHHHHH---HCCC---CSSEEEHHHHHHHHHTCGGGGGCCHHHHHHHHHCCCCHHH
T ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHH---CCCC---CCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 799999965998159996269889998512---4976---5535525699998732544131009999999769867867
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------------566640269999999999997
Q gi|254780818|r 155 -------------RSKHGALLDSHLLSDVYIKMM 175 (245)
Q Consensus 155 -------------r~~H~Al~Da~~~a~v~~~ll 175 (245)
.+-+-|-.||.++-++|.+|.
T Consensus 171 ~~~~s~W~~pLs~~Qi~YAA~DA~~~~~iy~~L~ 204 (206)
T 1vk0_A 171 DSIEAKWEKAGPEEQLEAAAIEGWLIVNVWDQLS 204 (206)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6521487688999999999998999999999985