HHsearch results for GI: 254780818 and protein with PDBid: 2f96_A
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PSI, MCSG, protein structure initiative; 2.09A {Pseudomonas aeruginosa PAO1} SCOP: c.55.3.5
Probab=99.97 E-value=6.5e-32 Score=218.01 Aligned_cols=173 Identities=23% Similarity=0.393 Sum_probs=135.9
Q ss_pred EEEECCCCCCCCCCCEEEEEEEEEEE-C---CEECCCEEEEEECC-CCCCCCHHHEEECCCCCCCCC-----CCCCCCHH
Q ss_conf 99984678888888889999999999-9---98803137989858-882288657242021012322-----48521002
Q gi|254780818|r 10 IVFDIETTGLDSKNDRIIEIGAVELL-D---YSKTNRTFQVFLCP-NGRKNSPEALKLHGITDEFLK-----DKPSFSSI 79 (245)
Q Consensus 10 iv~D~ETTGl~~~~d~Iieigav~i~-~---~~~~~~~f~~~i~P-~~~~i~~~~~~ihGIt~~~l~-----~~p~f~ev 79 (245)
||||+|||||||..|+|||||||.+. + ....+.+++.++.| ...+++++++.+|||+++++. ..+.|.+.
T Consensus 32 Vv~D~ETTGl~~~~d~IIeIgAV~v~~d~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (224)
T 2f96_A 32 VVVDVETGGFNSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEEAALTEI 111 (224)
T ss_dssp EEEEEEESSSCTTTBCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHH
T ss_conf 79998689989878846899999998524782610124668736866778985036512101256554032103779999
Q ss_pred HHHHHHHHHC---CCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCC-CCCCHHHHHHHHCCCCCCC
Q ss_conf 3447775300---23202310232243112100000112222100001100000001776-4222378999718754555
Q gi|254780818|r 80 FSEFWDFFNE---QNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPS-SRNDLNSLCKRYGITISHR 155 (245)
Q Consensus 80 ~~~f~~fi~~---~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~-~~~~L~~l~~~~~i~~~~r 155 (245)
+..+.+|+.. ....+|+||+.||..||++.+.+++..+.. ...+|++...+..++. ...+|+.+|++|||+.+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~n~~fd~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~l~~~~gi~~~~~ 190 (224)
T 2f96_A 112 FRGIRKALKANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNP-FHPFSSFDTATLAGLAYGQTVLAKACQAAGMEFDNR 190 (224)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTHHHHHHHHHHHHHHHTCCCCC-EEEEEEEEHHHHHHHHHSCCSHHHHHHHTTCCCCTT
T ss_pred HHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
T ss_conf 9999988764045543221534788999999999981999886-411358999999875479643999999829999989
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 6664026999999999999730576666
Q gi|254780818|r 156 SKHGALLDSHLLSDVYIKMMVGGSQINF 183 (245)
Q Consensus 156 ~~H~Al~Da~~~a~v~~~ll~g~~q~~l 183 (245)
++|+||+||++||+||++|+..+++.+-
T Consensus 191 ~aH~Al~Da~~ta~l~~kl~~~~~~~~~ 218 (224)
T 2f96_A 191 EAHSARYDTEKTAELFCGIVNRWKEMGG 218 (224)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7678899999999999999999998189