HHsearch results for GI: 254780818 and protein with PDBid: 2igi_A

>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli K12} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.81  E-value=3.7e-21  Score=150.81  Aligned_cols=157  Identities=15%  Similarity=0.106  Sum_probs=95.5

Q ss_pred             CEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCH-------HHEEECCCCCCCCCCCCCCCHHH
Q ss_conf             58999846788888888899999999999988031379898588822886-------57242021012322485210023
Q gi|254780818|r    8 RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSP-------EALKLHGITDEFLKDKPSFSSIF   80 (245)
Q Consensus         8 r~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~-------~~~~ihGIt~~~l~~~p~f~ev~   80 (245)
                      +.|++|+|||||||..|+|||||||.+.+.......+..+..+.....++       .....++..+......+......
T Consensus         6 ~lv~lD~ETTGL~p~~D~IIeIaaV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (180)
T 2igi_A            6 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAE   85 (180)
T ss_dssp             CEEEEEEEESSSCTTTCCEEEEEEEEECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCHHHHH
T ss_pred             CEEEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEECCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf             78999867899999998479999999989953654133000122212466434667301025533010234542399999


Q ss_pred             HHHHHHHH----CCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             44777530----02320231023224311210000011222210000110000000177642223789997187545556
Q gi|254780818|r   81 SEFWDFFN----EQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRS  156 (245)
Q Consensus        81 ~~f~~fi~----~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~  156 (245)
                      ..+..++.    .....+++||+.||..|+++.+.+.... + ..+.+|+..+.+...      +...+.++|++.  .+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~fD~~~l~~~~~~~~~~-~-~~~~lD~~~~~~~~~------~~~~~~~~~~~~--~~  155 (180)
T 2igi_A           86 LATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY-F-HYRYLDVSTLKELAR------RWKPEILDGFTK--QG  155 (180)
T ss_dssp             HHHHHHHTTTSCTTTSCEEESSHHHHHHHHHHHCHHHHHH-S-CSCEEETHHHHHHHH------HHCGGGGGGSCC--CC
T ss_pred             HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCC-C-CCCEECHHHHHHHHH------HHCHHHHCCCCC--CC
T ss_conf             9899988751257872564575401699999889973001-5-885132677999998------649787729999--99


Q ss_pred             CCCCHHHHHHHHHHHHHH
Q ss_conf             664026999999999999
Q gi|254780818|r  157 KHGALLDSHLLSDVYIKM  174 (245)
Q Consensus       157 ~H~Al~Da~~~a~v~~~l  174 (245)
                      +|+||+|+++|.+++..+
T Consensus       156 aHrAl~Dv~~ti~~l~~~  173 (180)
T 2igi_A          156 THQAMDDIRESVAELAYY  173 (180)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHH
T ss_conf             718589999999999999