HHsearch results for GI: 254780818 and protein with PDBid: 2igi_A
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli K12} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.81 E-value=3.7e-21 Score=150.81 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=95.5
Q ss_pred CEEEEECCCCCCCCCCCEEEEEEEEEEECCEECCCEEEEEECCCCCCCCH-------HHEEECCCCCCCCCCCCCCCHHH
Q ss_conf 58999846788888888899999999999988031379898588822886-------57242021012322485210023
Q gi|254780818|r 8 RKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSP-------EALKLHGITDEFLKDKPSFSSIF 80 (245)
Q Consensus 8 r~iv~D~ETTGl~~~~d~Iieigav~i~~~~~~~~~f~~~i~P~~~~i~~-------~~~~ihGIt~~~l~~~p~f~ev~ 80 (245)
+.|++|+|||||||..|+|||||||.+.+.......+..+..+.....++ .....++..+......+......
T Consensus 6 ~lv~lD~ETTGL~p~~D~IIeIaaV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (180)
T 2igi_A 6 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAE 85 (180)
T ss_dssp CEEEEEEEESSSCTTTCCEEEEEEEEECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCHHHHH
T ss_pred CEEEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEECCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 78999867899999998479999999989953654133000122212466434667301025533010234542399999
Q ss_pred HHHHHHHH----CCCCEEEEECCCCCCCEEEECHHCCCCCCCCCCHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 44777530----02320231023224311210000011222210000110000000177642223789997187545556
Q gi|254780818|r 81 SEFWDFFN----EQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRS 156 (245)
Q Consensus 81 ~~f~~fi~----~~~~~lVaHNa~FD~~fL~~el~r~~~~~~~~~~~iDTl~lar~~~p~~~~~L~~l~~~~~i~~~~r~ 156 (245)
..+..++. .....+++||+.||..|+++.+.+.... + ..+.+|+..+.+... +...+.++|++. .+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~fD~~~l~~~~~~~~~~-~-~~~~lD~~~~~~~~~------~~~~~~~~~~~~--~~ 155 (180)
T 2igi_A 86 LATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY-F-HYRYLDVSTLKELAR------RWKPEILDGFTK--QG 155 (180)
T ss_dssp HHHHHHHTTTSCTTTSCEEESSHHHHHHHHHHHCHHHHHH-S-CSCEEETHHHHHHHH------HHCGGGGGGSCC--CC
T ss_pred HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCC-C-CCCEECHHHHHHHHH------HHCHHHHCCCCC--CC
T ss_conf 9899988751257872564575401699999889973001-5-885132677999998------649787729999--99
Q ss_pred CCCCHHHHHHHHHHHHHH
Q ss_conf 664026999999999999
Q gi|254780818|r 157 KHGALLDSHLLSDVYIKM 174 (245)
Q Consensus 157 ~H~Al~Da~~~a~v~~~l 174 (245)
+|+||+|+++|.+++..+
T Consensus 156 aHrAl~Dv~~ti~~l~~~ 173 (180)
T 2igi_A 156 THQAMDDIRESVAELAYY 173 (180)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
T ss_conf 718589999999999999