BLAST/PSIBLAST alignment of GI: 254780818 and GI: 116249771 at iteration 1
>gi|116249771|ref|YP_765609.1| DNA polymerase III subunit epsilon [Rhizobium leguminosarum bv. viciae 3841] Length = 240
>gi|115254419|emb|CAK05493.1| putative DNA polymerase subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 240
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 8/239 (3%)
Query: 7 MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGIT 66
MR+I+FD ETTGLD++ DRIIEIG +EL ++ T T +F+ P +K P+AL +HGIT
Sbjct: 1 MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTIHIFINPGDQKVHPDALAVHGIT 60
Query: 67 DEFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDT 126
DEFLKDK F+ + + FF +A+WIAHNA FD+GFINAE RI P+ P R++DT
Sbjct: 61 DEFLKDKQPFAEVAEQILTFFG--DAKWIAHNATFDMGFINAEFARIGLPPILPERVLDT 118
Query: 127 LSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMVGGSQINFGF- 185
LS+ARRKHP N L++LC+RYGI SHR+KHGALLDS LL++VYI+ M+GG Q G
Sbjct: 119 LSMARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIE-MIGGRQAALGLG 177
Query: 186 ---KTNE-DRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGKNAIWDRY 240
K+N+ R + V +LL+R +PL R+++ E H+ + LG+ ++W +Y
Sbjct: 178 MVGKSNQAARGEMGMEDDVVIAALLERPRPLAPRLSQTEEQAHEALVAKLGEKSVWAKY 236