BLAST/PSIBLAST alignment of GI: 254780818 and GI: 86355674 at iteration 1
>gi|86355674|ref|YP_467566.1| DNA polymerase III subunit epsilon [Rhizobium etli CFN 42] Length = 240
>gi|86279776|gb|ABC88839.1| DNA polymerase III, epsilon chain protein [Rhizobium etli CFN 42] Length = 240
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 162/243 (66%), Gaps = 8/243 (3%)
Query: 7 MRKIVFDIETTGLDSKNDRIIEIGAVELLDYSKTNRTFQVFLCPNGRKNSPEALKLHGIT 66
MR+I+FD ETTGLD++ DRIIEIG +EL ++ T T +++ P +K P+AL +HGIT
Sbjct: 1 MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTLHIYINPGDQKVHPDALAVHGIT 60
Query: 67 DEFLKDKPSFSSIFSEFWDFFNEQNAEWIAHNAKFDVGFINAELQRINKDPLDPSRIIDT 126
DEFLKDK F+++ E FF + +WIAHNA FD+GFINAE RI P+ P ++IDT
Sbjct: 61 DEFLKDKKPFAAVADEILAFFG--DGKWIAHNATFDMGFINAEFARIGLPPILPDKVIDT 118
Query: 127 LSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDSHLLSDVYIKMMVGGSQINFGFK 186
LS+ARRKHP N L++LC+RYGI SHR+KHGALLDS LL++VYI+ M+GG Q FG
Sbjct: 119 LSMARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIE-MIGGRQAAFGLS 177
Query: 187 TN-----EDRFFKEEKKTVPNISLLKRDKPLFTRITKEELDEHDKTIQTLGKNAIWDRYI 241
+ R + + + L+R +PL +R+++ E H+ + LG+ IW +Y
Sbjct: 178 ISGQPGQAARGEMAMEDDMAFAAALERPRPLGSRLSRSEAQAHEALVAKLGEKGIWAKYA 237
Query: 242 SSN 244
SSN
Sbjct: 238 SSN 240