RPSBLAST alignment for GI: 254780818 and conserved domain: TIGR01298
>gnl|CDD|130365 TIGR01298, RNaseT, ribonuclease T. in gamma-subdivision Proteobacteria such as Escherichia coli and Xylella fastidiosa. Ribonuclease T is homologous to the DNA polymerase III alpha chain. It can liberate AMP from the common C-C-A terminus of uncharged tRNA. It appears also to be involved in RNA maturation. It also acts as a 3' to 5' single-strand DNA-specific exonuclease; it is distinctive for its ability to remove residues near a double-stranded stem. Ribonuclease T is a high copy suppressor in E. coli of a uv-repair defect caused by deletion of three other single-stranded DNA exonucleases. Length = 200
Score = 60.6 bits (147), Expect = 4e-10
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 10 IVFDIETTGLDSKNDRIIEIGAVEL-LD-----YSKTNRTFQVFLCPNGRKNSPEALKLH 63
+V D+ET G ++K D ++EI A+ L +D + T F V G PEAL+
Sbjct: 11 VVVDVETGGFNAKTDALLEIAAITLKMDEQGWLFPDTTLHFHVEPFE-GANIQPEALEFT 69
Query: 64 GIT-DEFLK----DKPSFSSIFSEFWDFFNE---QNAEWIAHNAKFDVGFINAELQRIN- 114
GI D L+ + + IF Q A + HNA FD+GF+NA ++R +
Sbjct: 70 GIDLDHPLRGAVSEYEALHEIFKVVRKAMKASGCQRAILVGHNANFDLGFLNAAVERTSL 129
Query: 115 -KDPLDPSRIIDTLSIARRKHPSSRNDLNSLCKRYGITISHRSKHGALLDS 164
++P P DT ++A + + L C+ G H AL D+
Sbjct: 130 KRNPFHPFSTFDTATLAGLAY--GQTVLAKACQAAGXDFDSTQAHSALYDT 178