HHsearch alignment for GI: 254780820 and conserved domain: COG0616

>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=95.35  E-value=0.18  Score=32.03  Aligned_cols=89  Identities=22%  Similarity=0.326  Sum_probs=56.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHC-C-CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC-CEEEE
Q ss_conf             5357789999999999998628-9-6899976888776521246777788999999998629988998567642-01111
Q gi|254780820|r  134 GSIGIAAGEAIVKSCERAIAEK-C-PLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTT-GGVTA  210 (284)
Q Consensus       134 GSmG~~~geki~~a~e~A~~~~-~-PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~-GGv~A  210 (284)
T Consensus        75 ~~~~~~~~~~~~~~l~~~~~~~~vk~vvL~inSPG----G~v~as~~---i~~~l~~l~~~~-PV~v~v~~~AASGGY~I  146 (317)
T COG0616          75 GPLRFIGGDDIEEILRAARADPSVKAVVLRINSPG----GSVVASEL---IARALKRLRAKK-PVVVSVGGYAASGGYYI  146 (317)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCC----CCHHHHHH---HHHHHHHHHHCC-CEEEEECCCCCCHHHHH
T ss_conf             76344667779999999850899873899998949----84689999---999999875329-89999887320289999


Q ss_pred             EECCCCCEEEEECCCEEECCCH
Q ss_conf             2014685255531421102327
Q gi|254780820|r  211 SYAMLGDIHLAEPGAEIGFAGR  232 (284)
Q Consensus       211 S~a~lgDiiiaep~a~igFaG~  232 (284)
T Consensus       147 --A~aAd~I~a~p~si~GSIGV  166 (317)
T COG0616         147 --ALAADKIVADPSSITGSIGV  166 (317)
T ss_pred             --HHCCCEEEECCCCCCCCCCE
T ss_conf             --84078798779860213501