HHsearch alignment for GI: 254780820 and conserved domain: COG1024
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].
Probab=97.26 E-value=0.028 Score=38.08 Aligned_cols=157 Identities=19% Similarity=0.280 Sum_probs=99.1
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCC------CHHHHHHHHHHHHHHHHH
Q ss_conf 999998330318535778999999999999862-89689997688-----877652------124677778899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQE------GILSLMQLPRTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqE------G~~sL~qMakt~~a~~~l 189 (284)
T Consensus 15 v~~itl~rp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltG~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (257)
T COG1024 15 IAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRAL 94 (257)
T ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89999706762358899999999999999962998169999818971671749887742231046888887889999999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC---------------HHHHHHHHCCC--CCCCCHHHHH
Q ss_conf 862998899856764201111201468525553142110232---------------78878763677--8872021599
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG---------------RRVIEQTVREK--LPDGFQRSEY 252 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG---------------~rVi~~t~~~~--lp~~fqtae~ 252 (284)
T Consensus 95 ~~~~kPvIAav~G~a~GgG-~eLal~~D~ria~~~a~f~~pe~~iGl~pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~e 173 (257)
T COG1024 95 ADLPKPVIAAVNGYALGGG-LELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAE 173 (257)
T ss_pred HHCCCCEEEEECCHHHHHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHH
T ss_conf 8589999998365014678-899870887983477788554134265878458899999739688999998289888999
Q ss_pred HHHCCCCCEEECH-HHHHHHHHHHHHHH
Q ss_conf 9968983537358-99999999999997
Q gi|254780820|r 253 LVEHGMIDRIVHR-HDIPEVVSSLCKIL 279 (284)
Q Consensus 253 l~~~G~iD~iv~r-~~l~~~i~~ll~il 279 (284)
T Consensus 174 A~~~Glv~~vv~~~~~l~~~a~~~a~~i 201 (257)
T COG1024 174 ALELGLVDEVVPDAEELLERALELARRL 201 (257)
T ss_pred HHHCCCCCEECCCHHHHHHHHHHHHHHH
T ss_conf 9978991466587688999999999987