HHsearch alignment for GI: 254780820 and conserved domain: PRK08788

Probab=96.63  E-value=0.014  Score=40.20  Aligned_cols=107  Identities=20%  Similarity=0.291  Sum_probs=68.1

Q ss_pred             HHHHHHHHHH-HHHHHHH---HCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCH------------HHHHH
Q ss_conf             4677778899-9999998---629988998567642011112014685255531421102327------------88787
Q gi|254780820|r  174 LSLMQLPRTT-IAINMLK---DAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGR------------RVIEQ  237 (284)
Q Consensus       174 ~sL~qMakt~-~a~~~l~---~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~------------rVi~~  237 (284)
T Consensus        97 ~~l~~ya~~~~~~l~~~~~~~~~p~~tIAaV~G~a~GGG-~elalacD~~IA~~~A~fg~pEv~lGl~Pg~Gg~~~L~R-  174 (286)
T PRK08788         97 DALLAYARRCVDGVHAFHTGLGAGAISIALVQGNALGGG-FEAALSHHTIIAEEGVKMGFPEILFNLFPGMGAYSFLAR-  174 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEECHHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCHHHHHHHH-
T ss_conf             999999999999999999745999846999847312577-999997898997399886363013486878607889998-


Q ss_pred             HHCCC------CCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf             63677------8872021599996898353735899999999999997237
Q gi|254780820|r  238 TVREK------LPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS  282 (284)
Q Consensus       238 t~~~~------lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~  282 (284)
T Consensus       175 ~iG~~~A~emiltG~~~sAeeA~~~GLVd~vvp~g~~~~A~~~~i~~~~~~  225 (286)
T PRK08788        175 RIGPQLAEELILSGKLYSAEELHDMGLVDQLVERGQGYAAVRQFIRKSKRK  225 (286)
T ss_pred             HHCHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
T ss_conf             869999999998299168999997699838528984899999999854667