HHsearch alignment for GI: 254780820 and conserved domain: PRK11423
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional.
Probab=98.08 E-value=7.9e-05 Score=56.89 Aligned_cols=161 Identities=9% Similarity=0.189 Sum_probs=98.2
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC-------CCCC---CCHHHHHHHH-HHHHHHHHHH
Q ss_conf 999998330318535778999999999999862896899976888-------7765---2124677778-8999999998
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGG-------ARMQ---EGILSLMQLP-RTTIAINMLK 190 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGG-------aRMq---EG~~sL~qMa-kt~~a~~~l~ 190 (284)
T Consensus 14 Va~itlnrP~~~Nal~~~m~~~l~~al~~~~~~~~r~vvl~~~~g~~~F~AG~Dl~e~~~~~~~~~~~~~~~~~~~~~i~ 93 (261)
T PRK11423 14 IATITFNNPAKRNALSKVLIDDLMQALSDLNRPEIRVVILRAPSGSKVWSAGHDIHELPAGGRDPLSYDDPLRQILRMIQ 93 (261)
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999748687799899999999999999857998799996588875423786654532257666778779999999999
Q ss_pred HCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCHHHHHH
Q ss_conf 62998899856764201111201468525553142110232788-----------78763677------88720215999
Q gi|254780820|r 191 DAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQRSEYL 253 (284)
Q Consensus 191 ~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fqtae~l 253 (284)
T Consensus 94 ~~~kPvIAav~G~a~GgG-~~lal~cD~~ia~~~a~f~~~~~~~Gl~~~~~~~~~l~~~iG~~~A~ellltg~~i~a~eA 172 (261)
T PRK11423 94 KFPKPVIAMVEGSVWGGA-FDLVMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGIHIVKEMFFTASPITAERA 172 (261)
T ss_pred HCCCCEEEEECCHHHHCH-HHHHHHHHHHCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 489989999677332140-8999987542101162695762002777685389999999769999998862896739999
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 968983537358999999999999972378
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
T Consensus 173 ~~~Glv~~vv~~~~l~~~a~~la~~ia~~~ 202 (261)
T PRK11423 173 LAVGILNHLVEVEELEDFTLQMARHISEKA 202 (261)
T ss_pred HHCCCCEEECCHHHHHHHHHHHHHHHHCCC
T ss_conf 987984075485799999999999998469