HHsearch alignment for GI: 254780820 and conserved domain: pfam01039

>pfam01039 Carboxyl_trans Carboxyl transferase domain. All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.
Probab=100.00  E-value=4.7e-38  Score=302.62  Aligned_cols=209  Identities=26%  Similarity=0.353  Sum_probs=177.8

Q ss_pred             ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf             43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r   56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS  135 (284)
Q Consensus        56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS  135 (284)
T Consensus         7 kltaReRi~~LlD~gSF~E~g~l~-------~~~--~~-----~~~~~~~p~dgvv~G~G~I~Gr~v~v~a~D~tv~gGs   72 (487)
T pfam01039         7 KLTARERIDLLLDPGSFGELEDLF-------FHR--VT-----EFGRKRLPGDGVVTGSGAIDGRAVEVVAQDFTVWGGS   72 (487)
T ss_pred             CCCHHHHHHHHCCCCCCCCCHHHH-------HCC--CC-----CCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEECCC
T ss_conf             857999999855999885355666-------401--54-----1000258873799999999888999996267277888


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf             57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r  136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML  215 (284)
Q Consensus       136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l  215 (284)
T Consensus        73 ~~~~~~~Ki~~~~e~A~~~~lP~v~l~dsgG~r~~eg~~~l~~~g~i~~~~~~~s-~~iP~is~v~G~~~GggA~~~~-~  150 (487)
T pfam01039        73 LGPAHGFKITRAMELAIKEGEPLIGINDSGGARIQEGVENLRGYGLIFGANSRAS-GVIPQISLVTGPCAGGGAYSPA-L  150 (487)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCEECCCCCCHHHHHHHHHC-CCCCEEEEECCCCCCHHHHHHH-H
T ss_conf             8766634479999999985995899982424034763130453117999999974-9998899953788636888876-0


Q ss_pred             CCEEEEE-CCCEEECCCHHHHHHHHCCCCCCCC-HHHHHH-HHCCCCCEEECHHH-HHHHHHHHHHHHH
Q ss_conf             8525553-1421102327887876367788720-215999-96898353735899-9999999999972
Q gi|254780820|r  216 GDIHLAE-PGAEIGFAGRRVIEQTVREKLPDGF-QRSEYL-VEHGMIDRIVHRHD-IPEVVSSLCKILT  280 (284)
Q Consensus       216 gDiiiae-p~a~igFaG~rVi~~t~~~~lp~~f-qtae~l-~~~G~iD~iv~r~~-l~~~i~~ll~il~  280 (284)
T Consensus       151 sd~~im~~~~s~l~~aGP~vv~~~~Ge~~~~eelgG~~~h~~~sGv~d~~~~~e~~a~~~~r~~ls~lP  219 (487)
T pfam01039       151 GDFIIMVKGTSPMFLTGPDVVKKVTGEEVTSEELGGADQHMTKSGVAHLTASDDEDALALIRKLLSYLP  219 (487)
T ss_pred             CCEEEEECCCCCEECCCCHHHHHHCCCCCCHHHCCCHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCC
T ss_conf             871588217643322483133430377458343367888742467331330588999999999985288