HHsearch results for GI: 254780820 and protein with PDBid: 1ef8_A
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.04 E-value=0.00028 Score=51.22 Aligned_cols=161 Identities=9% Similarity=0.161 Sum_probs=100.3
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-------CCCC---CHHHHHHHH-HHHHHHHHHH
Q ss_conf 9999983303185357789999999999998628968999768887-------7652---124677778-8999999998
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGA-------RMQE---GILSLMQLP-RTTIAINMLK 190 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGa-------RMqE---G~~sL~qMa-kt~~a~~~l~ 190 (284)
|++..+|--=-.-+++...-..+..+++.+.+...-+|++..++|- .+.| +...-..+. .....+..+.
T Consensus 14 i~~Itlnrp~~~Nal~~~~~~~L~~al~~~~~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (261)
T 1ef8_A 14 VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQ 93 (261)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999738777799999999999999999737998799997148997476687711343467430246699999999999
Q ss_pred HCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-------HHHHHCCCCC----------CCCHHHHHH
Q ss_conf 62998899856764201111201468525553142110232788-------7876367788----------720215999
Q gi|254780820|r 191 DAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-------IEQTVREKLP----------DGFQRSEYL 253 (284)
Q Consensus 191 ~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-------i~~t~~~~lp----------~~fqtae~l 253 (284)
+...|+|+.+.++|.||- ...++..|++|+.++|.+++.-.++ .-..+...++ -.--+|+-.
T Consensus 94 ~~~kPvIaav~G~a~GgG-~~lala~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~~~~G~~~a~~~~l~g~~~~a~eA 172 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGA-FEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRA 172 (261)
T ss_dssp HCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHH
T ss_pred HCCCCEEEEECCEEEEEE-EHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEECHHHH
T ss_conf 779988999774886401-0244534440000001235840001235564203244677173678999980984459999
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 968983537358999999999999972378
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
++.|++|.|++..++.+....+.+-+.+++
T Consensus 173 ~~~Glv~~v~~~~~~~~~a~~~a~~l~~~~ 202 (261)
T 1ef8_A 173 LAVGILNHVVEVEELEDFTLQMAHHISEKA 202 (261)
T ss_dssp HHTTSCSEEECHHHHHHHHHHHHHHHTTSC
T ss_pred HHCCCCCEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 975992275680457999999999998379