HHsearch results for GI: 254780820 and protein with PDBid: 1hzd_A

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=97.39  E-value=0.0064  Score=41.21  Aligned_cols=146  Identities=15%  Similarity=0.218  Sum_probs=88.5

Q ss_pred             EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------CCCCCCC-----HHHHHHHHHHHHHHHHH
Q ss_conf             999998330318535778999999999999862-89689997688------8776521-----24677778899999999
Q gi|254780820|r  122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------GARMQEG-----ILSLMQLPRTTIAINML  189 (284)
Q Consensus       122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------GaRMqEG-----~~sL~qMakt~~a~~~l  189 (284)
                      |+...+|--=-.-+|+...-+-+..+++.+.++ .+-+|++...|      |.-+.+-     .-....+.+....+..+
T Consensus        22 v~~itlnrP~~~Nal~~~~~~el~~~l~~~~~d~~~~~vVl~g~g~~~F~~G~d~~~~~~~~~~~~~~~~~~~~~~~~~i  101 (272)
T 1hzd_A           22 IVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDI  101 (272)
T ss_dssp             EEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             89999779987799999999999999999985999649999627887113551000110012034456677899999999


Q ss_pred             HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCCC------CCCCHHHHH
Q ss_conf             862998899856764201111201468525553142110232-----------788787636778------872021599
Q gi|254780820|r  190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREKL------PDGFQRSEY  252 (284)
Q Consensus       190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~l------p~~fqtae~  252 (284)
                      .+...|.|+.+.+.|.||- ..++...|+.|+.+++.++|.-           .......+|...      --.--+|+.
T Consensus       102 ~~~~kpvIaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~lll~g~~i~a~e  180 (272)
T 1hzd_A          102 ANLPVPTIAAIDGLALGGG-LELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKE  180 (272)
T ss_dssp             HTCSSCEEEEESEEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHH
T ss_pred             HHCCCCEEEEECCEECCCC-CEEECCCCHHHHCCCCEEECCCCCEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             9789989999788033577-511003032230689889775426513675244104303443999987861288468999


Q ss_pred             HHHCCCCCEEECHHHH
Q ss_conf             9968983537358999
Q gi|254780820|r  253 LVEHGMIDRIVHRHDI  268 (284)
Q Consensus       253 l~~~G~iD~iv~r~~l  268 (284)
                      .++.|+||.||+..++
T Consensus       181 A~~~Glv~~vv~~~~~  196 (272)
T 1hzd_A          181 AKAVGLISHVLEQNQE  196 (272)
T ss_dssp             HHHHTSCSEEECCCTT
T ss_pred             HHHCCCEEEEECCCHH
T ss_conf             9757972698486333