HHsearch results for GI: 254780820 and protein with PDBid: 3bf0_A
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=96.79 E-value=0.018 Score=37.82 Aligned_cols=159 Identities=16% Similarity=0.228 Sum_probs=96.9
Q ss_pred EEEEEEEEECEEEEEE---EEECHHHCCCCC---HHHHHHHHHHHHHHHHH-CCCEEEEE-CC-CCCCCCCCHHHHHHHH
Q ss_conf 6999878704149999---983303185357---78999999999999862-89689997-68-8877652124677778
Q gi|254780820|r 110 IVSAVGNVRDFKLVAV---VHEFSFIGGSIG---IAAGEAIVKSCERAIAE-KCPLVMFT-AS-GGARMQEGILSLMQLP 180 (284)
Q Consensus 110 vv~G~G~I~G~~vvv~---~~df~F~GGSmG---~~~geki~~a~e~A~~~-~~PlI~~~-~S-GGaRMqEG~~sL~qMa 180 (284)
++--.|.|-..+...- .....++|++-. ...=.-++++++.|.+. ++--|.+- .| +| .++.++.
T Consensus 35 ~l~l~G~ive~~~~~~p~~~~~~~~~g~~~~~~~~~~l~div~~i~~Aa~D~~IkgIvL~~~~~~g-------g~~a~~~ 107 (593)
T 3bf0_A 35 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAG-------GDQPSMQ 107 (593)
T ss_dssp EECCEEEEESCC--------------------CCEEEHHHHHHHHHHHHHCTTCCCEEEECTEEEE-------CCHHHHH
T ss_pred EEECCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC-------CCHHHHH
T ss_conf 994771685368888828888787516887754444499999999998349995089998069888-------7389999
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHH-------------------------
Q ss_conf 8999999998629988998567642011112014685255531421102327887-------------------------
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVI------------------------- 235 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi------------------------- 235 (284)
.+..|+.+++++|-|.++...+.+.++- -.|+.+|-|++.|.+.+++-|...-
T Consensus 108 ei~~al~~fk~sgKpVvA~~~~~~~~~Y--~LAS~AD~I~~~p~g~v~~~G~~~~~~~~k~~LdKlGI~~~v~~~G~yKs 185 (593)
T 3bf0_A 108 YIGKALKEFRDSGKPVYAVGENYSQGQY--YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKS 185 (593)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCEEHHHH--HHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCG
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHH--HHHHHCCEEEECCCCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCC
T ss_conf 9999999999709929999615521323--74643898998899668887038862567789997598069996156456
Q ss_pred --HHHHC-----------------------------CCCC-C----------------CCHHHHHHHHCCCCCEEECHHH
Q ss_conf --87636-----------------------------7788-7----------------2021599996898353735899
Q gi|254780820|r 236 --EQTVR-----------------------------EKLP-D----------------GFQRSEYLVEHGMIDRIVHRHD 267 (284)
Q Consensus 236 --~~t~~-----------------------------~~lp-~----------------~fqtae~l~~~G~iD~iv~r~~ 267 (284)
|.-++ -.++ + +..+++..++.|+||.+..+.|
T Consensus 186 a~epf~~~~mS~e~re~~~~ll~~l~~~f~~~Va~~R~l~~~~v~~~~~~~~~~l~~~~~~~a~~Al~~gLVD~l~~~de 265 (593)
T 3bf0_A 186 AVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAE 265 (593)
T ss_dssp GGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
T ss_conf 67866667899999999999999999999999988627883112234556888877607614999998655420012566
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780820|r 268 IPEVVSSLCK 277 (284)
Q Consensus 268 l~~~i~~ll~ 277 (284)
+++.+...+.
T Consensus 266 ~~~~l~~~~g 275 (593)
T 3bf0_A 266 IEKALTKEFG 275 (593)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
T ss_conf 7777787508