HHsearch results for GI: 254780820 and protein with PDBid: 3bpp_A
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=97.72 E-value=0.0017 Score=45.52 Aligned_cols=126 Identities=16% Similarity=0.207 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEE-
Q ss_conf 535778999999999999862896-899976888776521246777788999999998629988998567642011112-
Q gi|254780820|r 134 GSIGIAAGEAIVKSCERAIAEKCP-LVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTAS- 211 (284)
Q Consensus 134 GSmG~~~geki~~a~e~A~~~~~P-lI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS- 211 (284)
|.+++...+.+.++++.|.+.+.. +|+...|.|... .+...+..+ ++..+.|.+.+... .||.+||
T Consensus 17 G~I~~~~~~~i~~~l~~a~~~~~kaivL~IdSPGG~v-------~~~~~I~~~---i~~~~~~v~~~v~~--~~~~AaS~ 84 (230)
T 3bpp_A 17 GQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRA-------DAMMNIVQR---IQQSKIPVIIYVYP--PGASAASA 84 (230)
T ss_dssp SSBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCBCH-------HHHHHHHHH---HHTCSSCEEEEECS--TTCEEETH
T ss_pred EEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH-------HHHHHHHHH---HHHCCCCCCEEEEE--CCHHHHHH
T ss_conf 6888699999999999997689986999985988189-------999999999---86046788579997--34467777
Q ss_pred ---ECCCCCEEEEECCCEEECCCHHHH-------------------------HHHHCCC-------C-CCCCHHHHHHHH
Q ss_conf ---014685255531421102327887-------------------------8763677-------8-872021599996
Q gi|254780820|r 212 ---YAMLGDIHLAEPGAEIGFAGRRVI-------------------------EQTVREK-------L-PDGFQRSEYLVE 255 (284)
Q Consensus 212 ---~a~lgDiiiaep~a~igFaG~rVi-------------------------~~t~~~~-------l-p~~fqtae~l~~ 255 (284)
.|+-+|.+++.|++.+|..|+..- .+..+.. + ..-+.+++-.++
T Consensus 85 g~~ia~a~d~i~~~p~s~iGs~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~v~~~~~~~~~eA~~ 164 (230)
T 3bpp_A 85 GTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALK 164 (230)
T ss_dssp HHHHHHTSSEEEECTTCEEECCCCEEECCSSSCCEECCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCCEECHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH
T ss_conf 89988508989978998175645423578850267778888999999999999993949999998876687864999998
Q ss_pred CCCCCEEEC-HHHHHHH
Q ss_conf 898353735-8999999
Q gi|254780820|r 256 HGMIDRIVH-RHDIPEV 271 (284)
Q Consensus 256 ~G~iD~iv~-r~~l~~~ 271 (284)
.|++|.|.. +.++-+.
T Consensus 165 ~GlvD~i~~~~~~ll~~ 181 (230)
T 3bpp_A 165 YGVIEVVARDINELLKK 181 (230)
T ss_dssp TTSCSEECSSHHHHHHH
T ss_pred CCCCCEECCCHHHHHHH
T ss_conf 19730023899999987