HHsearch results for GI: 254780820 and protein with PDBid: 3gf3_A

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=99.65  E-value=4.5e-14  Score=123.67  Aligned_cols=200  Identities=15%  Similarity=0.227  Sum_probs=150.9

Q ss_pred             CCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEE---
Q ss_conf             98962437999999845565420133456870201867642035667766642166771699987870414999998---
Q gi|254780820|r   51 SDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVH---  127 (284)
Q Consensus        51 C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~---  127 (284)
                      .+..-+...|+-|+.++|.++|.|+...              |             ..++|||.++|+|++|.+.+.   
T Consensus       318 ~~~~~~yD~r~vi~~i~D~~sf~E~~~~--------------~-------------g~~vvtG~aRl~G~pVGviAn~~~  370 (588)
T 3gf3_A          318 MNQKRPYDIYEVIARLFDNSEFSEYKKG--------------Y-------------GPEMVTGLAKVNGLLVGVIANVQG  370 (588)
T ss_dssp             SSTTCCCCHHHHHHHHSGGGBCEESSTT--------------S-------------STTEEEEEEEETTEEEEEEEECCS
T ss_pred             CCCCCCCCHHHHHHHCCCCCCEEEECCC--------------C-------------CCCCEEEEEEECCCEEEEEECCCC
T ss_conf             0467777499999864555532320355--------------5-------------776326677648947999951455


Q ss_pred             ----------ECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             ----------330318535778999999999999862896899976888776-----52124677778899999999862
Q gi|254780820|r  128 ----------EFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAINMLKDA  192 (284)
Q Consensus       128 ----------df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~~l~~~  192 (284)
                                +..++||.+.....+|.+|.++.+-..++|||.|.+.-|.-.     +.|++  -..+|...|+   .++
T Consensus       371 ~~~~~p~~~~~~~~~~G~l~~~aa~Kaarfi~lcd~f~lPlv~lvD~pGf~~G~~~E~~Gii--~~gA~~~~A~---a~a  445 (588)
T 3gf3_A          371 LLMNYPEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELL--GLGQSLIYSI---ENS  445 (588)
T ss_dssp             EEETCCTTSSSCEEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHH--HHHHHHHHHH---HHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH--HHHHHHHHHH---HCC
T ss_conf             34456543356200378667778999999998515479876999357887787688871499--9999999998---717


Q ss_pred             CCCEEEEECCCCCCEEEEEECCC-----CCEEEEE--CCCEEECCCHHHHHHHH-C------CCCCCCC-----------
Q ss_conf             99889985676420111120146-----8525553--14211023278878763-6------7788720-----------
Q gi|254780820|r  193 GLPYIVVLTNPTTGGVTASYAML-----GDIHLAE--PGAEIGFAGRRVIEQTV-R------EKLPDGF-----------  247 (284)
Q Consensus       193 ~lP~I~vl~~pt~GGv~AS~a~l-----gDiiiae--p~a~igFaG~rVi~~t~-~------~~lp~~f-----------  247 (284)
                      .+|.|+|++...+||.  .++|.     .|++++-  |.|.||.-||.-.-+++ +      ++-.++.           
T Consensus       446 ~vP~isvi~rka~Ggg--~~am~~~~~~~d~~~a~~~p~a~~~vm~~ega~~i~~~~e~~~a~~~~~~~~~~~~~~~~~~  523 (588)
T 3gf3_A          446 KLPSLEITIRKASAAA--HYVLGGPQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMI  523 (588)
T ss_dssp             CSCEEEEESSEEETTH--HHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHH
T ss_pred             CCCEEEEEECCCCCHH--HHHHCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             9997999978753145--66524755688646876788762842589999999999999753167714458999999999


Q ss_pred             ------HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ------2159999689835373589999999999999723789
Q gi|254780820|r  248 ------QRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ  284 (284)
Q Consensus       248 ------qtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~  284 (284)
                            .++.+.-++|.||.||++.|.|..|...|+++..|.|
T Consensus       524 ~~~~~~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~~~~~~~~  566 (588)
T 3gf3_A          524 QMYTDKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTEAAYQNPQ  566 (588)
T ss_dssp             HHHHHTTSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCS
T ss_pred             HHHHHHCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999846999998657878127839999999999999985876