Query gi|254780820|ref|YP_003065233.1| acetyl-CoA carboxylase subunit beta [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 284
No_of_seqs 178 out of 1955
Neff 5.6
Searched_HMMs 23785
Date Mon May 30 12:57:57 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780820.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f9i_B Acetyl-coenzyme A carbo 100.0 0 0 717.2 26.2 281 1-284 3-285 (285)
2 2f9y_B Acetyl-coenzyme A carbo 100.0 0 0 692.9 23.9 280 1-282 1-280 (304)
3 2bzr_A Propionyl-COA carboxyla 100.0 4.1E-42 0 331.0 19.7 212 56-280 56-270 (548)
4 3iav_A Propionyl-COA carboxyla 100.0 1.1E-41 0 327.8 20.2 229 39-280 19-259 (530)
5 3n6r_B Propionyl-COA carboxyla 100.0 1.2E-41 0 327.5 19.9 212 56-280 53-267 (531)
6 1on3_A Methylmalonyl-COA carbo 100.0 8E-42 0 328.8 18.2 210 56-279 43-255 (523)
7 1vrg_A Propionyl-COA carboxyla 100.0 2.6E-41 1.4E-45 325.1 19.1 212 56-280 46-260 (527)
8 1x0u_A Hypothetical methylmalo 100.0 1E-40 4.2E-45 320.7 22.1 213 56-281 39-255 (522)
9 3gf3_A Glutaconyl-COA decarbox 100.0 1.7E-35 7.3E-40 282.0 17.7 205 56-280 61-290 (588)
10 1pix_A Glutaconyl-COA decarbox 100.0 1.8E-33 7.8E-38 267.0 16.2 205 56-280 60-287 (587)
11 3k8x_A Acetyl-COA carboxylase; 99.9 4E-26 1.7E-30 212.8 18.1 172 107-280 86-336 (758)
12 3ff6_A Acetyl-COA carboxylase 99.9 7.9E-26 3.3E-30 210.6 15.2 171 107-279 76-322 (760)
13 3iav_A Propionyl-COA carboxyla 99.7 1.1E-15 4.8E-20 135.5 20.1 204 46-284 286-518 (530)
14 1x0u_A Hypothetical methylmalo 99.7 1.6E-15 6.6E-20 134.4 20.6 200 52-283 284-509 (522)
15 2bzr_A Propionyl-COA carboxyla 99.7 3.1E-15 1.3E-19 132.2 21.1 206 44-283 300-535 (548)
16 3n6r_B Propionyl-COA carboxyla 99.7 1.4E-15 6.1E-20 134.7 17.2 202 47-283 293-518 (531)
17 1on3_A Methylmalonyl-COA carbo 99.7 1.9E-15 7.9E-20 133.9 17.7 200 52-283 285-510 (523)
18 1vrg_A Propionyl-COA carboxyla 99.7 2E-15 8.3E-20 133.7 17.0 202 51-284 288-515 (527)
19 3gf3_A Glutaconyl-COA decarbox 99.7 4.5E-14 1.9E-18 123.7 19.6 200 51-284 318-566 (588)
20 1pix_A Glutaconyl-COA decarbox 99.6 1.7E-14 7.1E-19 126.8 16.3 203 47-284 312-564 (587)
21 2f9i_A Acetyl-coenzyme A carbo 99.5 7.4E-12 3.1E-16 107.2 20.3 205 51-282 73-306 (327)
22 3ff6_A Acetyl-COA carboxylase 99.5 4.7E-12 2E-16 108.7 16.7 167 107-281 388-644 (760)
23 2f9y_A Acetyl-COA carboxylase, 99.5 1.2E-11 4.8E-16 105.8 18.2 203 51-281 87-319 (339)
24 3k8x_A Acetyl-COA carboxylase; 99.4 9.1E-11 3.8E-15 99.2 17.1 191 56-278 365-653 (758)
25 3isa_A Putative enoyl-COA hydr 98.1 0.00033 1.4E-08 50.7 15.6 158 123-282 18-200 (254)
26 1ef8_A Methylmalonyl COA decar 98.0 0.00028 1.2E-08 51.2 14.2 161 122-283 14-202 (261)
27 2vx2_A Enoyl-COA hydratase dom 98.0 0.00038 1.6E-08 50.2 14.6 161 114-282 37-230 (287)
28 2a7k_A CARB; crotonase, antibi 98.0 0.0015 6.2E-08 45.9 17.1 162 121-283 9-199 (250)
29 3lke_A Enoyl-COA hydratase; ny 98.0 0.0013 5.7E-08 46.2 16.7 156 125-282 17-207 (263)
30 3myb_A Enoyl-COA hydratase; ss 98.0 0.00091 3.8E-08 47.4 15.5 160 122-282 36-223 (286)
31 3njd_A Enoyl-COA hydratase; ss 97.9 0.00076 3.2E-08 48.0 14.9 159 117-282 41-259 (333)
32 3ome_A Enoyl-COA hydratase; ss 97.9 0.00084 3.5E-08 47.7 14.4 160 117-283 29-224 (282)
33 3he2_A Enoyl-COA hydratase ECH 97.9 0.00069 2.9E-08 48.3 13.9 148 122-275 31-205 (264)
34 2gtr_A CDY-like, chromodomain 97.9 0.0013 5.6E-08 46.2 15.2 146 132-283 26-207 (261)
35 2ej5_A Enoyl-COA hydratase sub 97.9 0.0019 8E-08 45.1 15.8 161 122-283 13-200 (257)
36 2j5g_A ALR4455 protein; enzyme 97.8 0.0032 1.3E-07 43.4 17.3 150 132-283 44-223 (263)
37 2f6q_A Peroxisomal 3,2-trans-e 97.8 0.0027 1.1E-07 44.0 16.2 161 122-283 36-227 (280)
38 2fbm_A Y chromosome chromodoma 97.8 0.00025 1.1E-08 51.6 11.0 160 122-282 33-224 (291)
39 2iex_A Dihydroxynapthoic acid 97.8 0.0024 1E-07 44.3 15.9 156 122-283 22-212 (272)
40 2q35_A CURF; crotonase, lyase; 97.8 0.00044 1.8E-08 49.8 11.9 157 122-283 13-196 (243)
41 3hp0_A Putative polyketide bio 97.8 0.0004 1.7E-08 50.1 11.6 147 122-269 17-191 (267)
42 3pea_A Enoyl-COA hydratase/iso 97.8 0.003 1.3E-07 43.6 15.9 163 117-283 12-204 (261)
43 3h02_A Naphthoate synthase; ID 97.8 0.0012 5.1E-08 46.5 13.9 146 132-283 47-228 (288)
44 1uiy_A Enoyl-COA hydratase; ly 97.8 0.002 8.2E-08 45.0 14.9 157 121-283 8-199 (253)
45 3gow_A PAAG, probable enoyl-CO 97.8 0.0012 5.2E-08 46.5 13.8 159 122-282 10-196 (254)
46 3kqf_A Enoyl-COA hydratase/iso 97.8 0.0009 3.8E-08 47.5 13.0 160 122-283 19-208 (265)
47 2j5i_A P-hydroxycinnamoyl COA 97.8 0.0019 8.1E-08 45.0 14.4 165 116-283 14-212 (276)
48 3bpp_A 1510-N membrane proteas 97.7 0.0017 7E-08 45.5 13.6 126 134-271 17-181 (230)
49 3l3s_A Enoyl-COA hydratase/iso 97.7 0.0045 1.9E-07 42.3 15.8 155 122-283 17-209 (263)
50 3ot6_A Enoyl-COA hydratase/iso 97.7 0.001 4.4E-08 47.0 11.9 159 122-283 16-201 (232)
51 3i47_A Enoyl COA hydratase/iso 97.6 0.0017 7.1E-08 45.5 12.7 160 122-283 14-204 (268)
52 3hin_A Putative 3-hydroxybutyr 97.6 0.0011 4.8E-08 46.7 11.7 162 118-282 23-211 (275)
53 2pbp_A Enoyl-COA hydratase sub 97.6 0.0026 1.1E-07 44.0 13.3 161 121-282 14-200 (258)
54 3h81_A Enoyl-COA hydratase ECH 97.6 0.00096 4E-08 47.3 10.9 160 122-282 35-220 (278)
55 3g64_A Putative enoyl-COA hydr 97.6 0.0067 2.8E-07 41.0 15.2 161 116-283 22-220 (279)
56 1sg4_A 3,2-trans-enoyl-COA iso 97.6 0.0022 9.3E-08 44.6 12.5 149 134-283 26-205 (260)
57 1wz8_A Enoyl-COA hydratase; ly 97.5 0.0041 1.7E-07 42.6 13.2 155 122-283 21-210 (264)
58 3moy_A Probable enoyl-COA hydr 97.5 0.0016 6.7E-08 45.6 10.8 160 122-282 20-205 (263)
59 3p5m_A Enoyl-COA hydratase/iso 97.5 0.0034 1.4E-07 43.2 12.4 159 122-282 16-197 (255)
60 1szo_A 6-oxocamphor hydrolase; 97.5 0.01 4.4E-07 39.6 16.9 161 121-283 25-214 (257)
61 3bpt_A 3-hydroxyisobutyryl-COA 97.4 0.011 4.8E-07 39.4 14.8 153 118-277 13-201 (363)
62 1hzd_A AUH, AU-binding protein 97.4 0.0064 2.7E-07 41.2 12.9 146 122-268 22-196 (272)
63 3gkb_A Putative enoyl-COA hydr 97.4 0.011 4.5E-07 39.6 14.0 154 127-283 25-213 (287)
64 3p85_A Enoyl-COA hydratase; ss 97.4 0.00095 4E-08 47.3 8.5 160 122-282 35-213 (270)
65 3h0u_A Putative enoyl-COA hydr 97.4 0.0063 2.7E-07 41.2 12.7 164 117-283 14-210 (289)
66 1nzy_A Dehalogenase, 4-chlorob 97.3 0.015 6.1E-07 38.5 15.6 161 122-283 13-206 (269)
67 1mj3_A Enoyl-COA hydratase, mi 97.3 0.0023 9.8E-08 44.4 10.1 155 122-282 17-202 (260)
68 3ju1_A Enoyl-COA hydratase/iso 97.1 0.022 9.3E-07 37.2 13.4 162 114-276 44-240 (407)
69 1dci_A Dienoyl-COA isomerase; 97.1 0.026 1.1E-06 36.6 15.7 160 122-282 14-214 (275)
70 3oc7_A Enoyl-COA hydratase; se 97.0 0.029 1.2E-06 36.3 14.9 167 108-282 6-210 (267)
71 1q52_A MENB; lyase, structural 97.0 0.03 1.3E-06 36.2 13.9 169 111-282 37-253 (314)
72 1wdk_A Fatty oxidation complex 96.9 0.035 1.5E-06 35.7 17.1 159 122-281 17-207 (715)
73 2w3p_A Benzoyl-COA-dihydrodiol 96.9 0.03 1.3E-06 36.2 12.5 164 117-282 27-239 (556)
74 3bf0_A Protease 4; bacterial, 96.9 0.0095 4E-07 39.9 9.6 82 135-228 318-405 (593)
75 1pjh_A Enoyl-COA isomerase; EC 96.8 0.043 1.8E-06 35.1 15.9 143 116-265 14-201 (280)
76 2np9_A DPGC; protein inhibitor 96.8 0.044 1.8E-06 35.0 12.6 152 122-279 177-385 (440)
77 3bf0_A Protease 4; bacterial, 96.8 0.018 7.7E-07 37.8 10.5 159 110-277 35-275 (593)
78 3lao_A Enoyl-COA hydratase/iso 96.7 0.01 4.4E-07 39.6 8.9 158 122-282 22-210 (258)
79 2x58_A Peroxisomal bifunctiona 96.6 0.06 2.5E-06 34.0 12.3 155 115-273 10-187 (727)
80 2ppy_A Enoyl-COA hydratase; be 96.5 0.067 2.8E-06 33.6 14.5 155 122-283 19-208 (265)
81 3m6n_A RPFF protein; enoyl-COA 96.4 0.0055 2.3E-07 41.6 5.8 92 189-281 136-244 (305)
82 2wtb_A MFP2, fatty acid multif 95.9 0.039 1.6E-06 35.4 7.9 160 119-281 15-206 (725)
83 3fdu_A Putative enoyl-COA hydr 95.8 0.14 5.9E-06 31.3 17.0 147 122-269 15-191 (266)
84 1yg6_A ATP-dependent CLP prote 91.0 0.81 3.4E-05 25.6 7.1 121 131-266 30-192 (193)
85 2cby_A ATP-dependent CLP prote 91.0 0.22 9.1E-06 29.9 4.1 125 131-270 31-197 (208)
86 3p2l_A ATP-dependent CLP prote 90.2 0.52 2.2E-05 27.1 5.5 123 131-268 34-199 (201)
87 2ct7_A Ring finger protein 31; 89.5 0.09 3.8E-06 32.7 1.1 37 23-60 22-58 (86)
88 2akl_A PHNA-like protein PA012 89.3 0.034 1.4E-06 35.8 -1.1 29 26-56 27-55 (138)
89 2zjr_Z 50S ribosomal protein L 88.3 0.27 1.1E-05 29.2 2.9 23 26-54 30-52 (60)
90 2f6i_A ATP-dependent CLP prote 87.8 0.87 3.7E-05 25.4 5.2 120 131-265 43-203 (215)
91 1y7o_A ATP-dependent CLP prote 87.7 0.49 2.1E-05 27.3 3.9 123 131-268 49-215 (218)
92 2j01_5 50S ribosomal protein L 87.4 0.13 5.4E-06 31.6 0.8 23 26-54 30-52 (60)
93 3gtx_A Organophosphorus hydrol 84.1 1.3 5.5E-05 24.1 4.6 106 136-263 167-276 (339)
94 1lko_A Rubrerythrin all-iron(I 83.5 0.13 5.3E-06 31.6 -0.8 27 23-53 153-179 (191)
95 1dl6_A Transcription factor II 83.4 0.11 4.5E-06 32.2 -1.2 35 18-54 5-39 (58)
96 3h0g_I DNA-directed RNA polyme 83.2 0.17 7E-06 30.7 -0.3 31 27-57 5-38 (113)
97 3k2g_A Resiniferatoxin-binding 83.1 0.34 1.4E-05 28.4 1.3 110 136-263 184-300 (364)
98 3ofq_0 50S ribosomal protein L 82.0 0.44 1.9E-05 27.6 1.5 22 26-54 27-48 (56)
99 1twf_I B12.6, DNA-directed RNA 80.4 0.29 1.2E-05 28.9 0.2 32 27-58 5-39 (122)
100 3cwc_A Putative glycerate kina 79.8 1.7 7.1E-05 23.3 3.9 23 141-163 305-327 (383)
101 2k5c_A Uncharacterized protein 79.4 1.3 5.5E-05 24.1 3.2 43 26-68 8-80 (95)
102 3o9x_A Uncharacterized HTH-typ 79.0 0.23 9.6E-06 29.7 -0.8 68 27-107 3-86 (133)
103 2vc7_A Aryldialkylphosphatase; 78.8 2.2 9.4E-05 22.4 4.2 105 136-263 145-252 (314)
104 1y7p_A Hypothetical protein AF 78.6 1.1 4.5E-05 24.8 2.5 88 114-210 82-201 (223)
105 2apo_B Ribosome biogenesis pro 78.5 2.1 8.6E-05 22.7 4.0 21 26-53 6-26 (60)
106 3m7n_A Putative uncharacterize 77.5 0.48 2E-05 27.3 0.5 26 25-53 139-164 (179)
107 3a43_A HYPD, hydrogenase nicke 77.4 0.89 3.7E-05 25.3 1.9 28 27-54 71-116 (139)
108 2kdx_A HYPA, hydrogenase/ureas 76.5 0.67 2.8E-05 26.3 1.0 29 27-57 74-103 (119)
109 2nn6_I 3'-5' exoribonuclease C 75.8 0.6 2.5E-05 26.6 0.7 10 115-124 90-99 (209)
110 2aus_D NOP10, ribosome biogene 74.9 2.4 9.9E-05 22.2 3.5 22 25-53 4-25 (60)
111 3k7a_M Transcription initiatio 74.8 0.39 1.6E-05 28.0 -0.5 31 25-55 20-52 (345)
112 1tg6_A Putative ATP-dependent 74.1 4.8 0.0002 19.9 4.9 120 131-265 86-247 (277)
113 3k1f_M Transcription initiatio 73.3 0.54 2.3E-05 27.0 -0.1 32 24-55 19-52 (197)
114 3cng_A Nudix hydrolase; struct 71.0 0.35 1.5E-05 28.4 -1.5 34 26-59 3-39 (189)
115 1pft_A TFIIB, PFTFIIBN; N-term 70.4 0.47 2E-05 27.4 -1.0 28 27-54 6-33 (50)
116 1l1o_C Replication protein A 7 69.6 0.68 2.9E-05 26.2 -0.3 48 22-71 38-89 (181)
117 1vk6_A NADH pyrophosphatase; 1 69.2 0.68 2.9E-05 26.2 -0.4 23 129-153 166-188 (269)
118 1nnq_A Rubrerythrin; structura 68.9 1.6 6.8E-05 23.4 1.5 38 13-54 126-163 (171)
119 1s1m_A CTP synthase; CTP synth 67.6 6.2 0.00026 19.1 4.3 58 133-202 350-418 (545)
120 3ihp_A Ubiquitin carboxyl-term 67.5 0.91 3.8E-05 25.3 0.0 29 17-53 207-235 (854)
121 1qyp_A RNA polymerase II; tran 67.2 0.48 2E-05 27.3 -1.5 35 21-56 11-54 (57)
122 1cjy_A CPLA2, protein (cytosol 66.6 6.7 0.00028 18.8 4.3 46 154-207 185-230 (749)
123 2qkd_A Zinc finger protein ZPR 65.4 0.51 2.1E-05 27.1 -1.6 70 127-206 306-375 (404)
124 3flo_B DNA polymerase alpha ca 64.9 0.59 2.5E-05 26.7 -1.4 49 20-68 16-73 (206)
125 2qkd_A Zinc finger protein ZPR 64.6 0.71 3E-05 26.1 -1.0 30 27-56 13-52 (404)
126 2jmo_A Parkin; IBR, E3 ligase, 64.6 1.9 8.1E-05 22.8 1.2 32 24-57 25-62 (80)
127 1wjv_A Cell growth regulating 63.4 2.1 8.7E-05 22.6 1.2 29 25-53 9-37 (79)
128 3hww_A 2-succinyl-5-enolpyruvy 63.0 0.43 1.8E-05 27.7 -2.3 132 123-280 409-554 (556)
129 2e9h_A EIF-5, eukaryotic trans 62.8 0.5 2.1E-05 27.2 -2.1 42 25-66 102-147 (157)
130 1yop_A KTI11P; zinc finger, me 62.7 3.2 0.00013 21.2 2.0 45 24-77 21-69 (83)
131 2g2k_A EIF-5, eukaryotic trans 62.6 0.42 1.8E-05 27.7 -2.5 43 25-67 95-141 (170)
132 1h7b_A Anaerobic ribonucleotid 61.4 1.4 6E-05 23.8 0.1 56 138-198 204-270 (605)
133 3na7_A HP0958; flagellar bioge 61.3 1.3 5.5E-05 24.1 -0.1 42 27-79 199-245 (256)
134 1p91_A Ribosomal RNA large sub 60.9 2 8.3E-05 22.8 0.7 35 27-65 3-37 (269)
135 3ojg_A Phosphotriesterase; (be 59.7 9.1 0.00038 17.9 4.9 106 136-264 157-267 (330)
136 1lgy_A Lipase, triacylglycerol 58.6 1.7 7E-05 23.3 0.0 86 149-235 88-181 (269)
137 2jr7_A DPH3 homolog; DESR1, CS 58.1 7.9 0.00033 18.3 3.4 44 24-76 21-68 (89)
138 2axo_A Hypothetical protein AT 57.4 9.9 0.00041 17.6 4.5 91 48-157 54-147 (270)
139 2ctd_A Zinc finger protein 512 57.0 5.2 0.00022 19.6 2.3 40 27-66 35-83 (96)
140 2yre_A F-box only protein 30; 57.0 5.5 0.00023 19.5 2.5 37 25-61 36-82 (100)
141 2pzi_A Probable serine/threoni 56.9 2.7 0.00011 21.8 0.8 117 19-137 28-172 (681)
142 1wge_A Hypothetical protein 26 56.9 6.7 0.00028 18.8 2.9 44 25-77 29-76 (83)
143 2kpi_A Uncharacterized protein 56.8 2.1 8.8E-05 22.6 0.3 32 26-58 10-41 (56)
144 2gnr_A Conserved hypothetical 56.8 3.2 0.00013 21.2 1.2 25 25-54 46-70 (145)
145 1wd2_A Ariadne-1 protein homol 55.9 1.3 5.4E-05 24.1 -0.9 31 26-57 6-38 (60)
146 2jr6_A UPF0434 protein NMA0874 54.7 1.7 7.3E-05 23.2 -0.4 30 27-57 9-38 (68)
147 1yuz_A Nigerythrin; rubrythrin 54.5 2.8 0.00012 21.6 0.6 11 146-156 125-135 (202)
148 3kuu_A Phosphoribosylaminoimid 54.4 6.3 0.00027 19.0 2.4 41 151-202 86-127 (174)
149 1s24_A Rubredoxin 2; electron 53.4 2.3 9.7E-05 22.3 0.0 25 27-53 36-76 (87)
150 1tia_A Lipase; hydrolase(carbo 53.0 3.7 0.00015 20.8 1.0 71 164-235 103-177 (279)
151 2g45_A Ubiquitin carboxyl-term 53.0 3.2 0.00013 21.3 0.7 26 20-53 29-54 (129)
152 2c46_A MRNA capping enzyme; gu 52.7 4.2 0.00017 20.4 1.3 22 16-38 23-44 (241)
153 2e72_A POGO transposable eleme 52.5 5.5 0.00023 19.5 1.8 21 45-65 12-32 (49)
154 2vbf_A Branched-chain alpha-ke 52.3 0.71 3E-05 26.0 -2.7 134 132-282 423-568 (570)
155 2js4_A UPF0434 protein BB2007; 52.1 2.1 8.9E-05 22.6 -0.3 39 26-67 8-46 (70)
156 1tgl_A Triacyl-glycerol acylhy 52.1 5.9 0.00025 19.3 1.9 71 163-234 101-179 (269)
157 2jny_A Uncharacterized BCR; st 51.1 2.1 8.8E-05 22.6 -0.5 30 27-57 11-40 (67)
158 2eod_A TNF receptor-associated 50.3 6.8 0.00028 18.8 2.0 25 25-49 9-33 (66)
159 2waq_P DNA-directed RNA polyme 50.1 2.2 9.2E-05 22.5 -0.5 29 27-55 4-33 (48)
160 1wep_A PHF8; structural genomi 50.0 10 0.00042 17.6 2.9 34 20-53 21-62 (79)
161 2kn9_A Rubredoxin; metalloprot 49.7 3 0.00013 21.4 0.1 26 26-53 27-68 (81)
162 2w7t_A CTP synthetase, putativ 49.6 10 0.00044 17.4 2.9 30 134-163 75-104 (273)
163 2v4u_A CTP synthase 2; pyrimid 49.6 9.9 0.00041 17.6 2.8 33 131-163 95-127 (289)
164 2fuk_A XC6422 protein; A/B hyd 49.2 6.3 0.00026 19.1 1.7 84 121-212 38-127 (220)
165 1vd4_A Transcription initiatio 48.5 6.9 0.00029 18.8 1.8 27 27-53 15-47 (62)
166 3nva_A CTP synthase; rossman f 48.4 7.3 0.00031 18.6 1.9 57 133-201 357-424 (535)
167 2gqj_A Zinc finger protein KIA 48.1 5.7 0.00024 19.4 1.3 40 26-65 24-74 (98)
168 2jne_A Hypothetical protein YF 47.8 2.7 0.00011 21.8 -0.3 35 21-58 25-61 (101)
169 1oj7_A Hypothetical oxidoreduc 47.6 14 0.00058 16.5 5.7 65 140-213 91-171 (408)
170 6rxn_A Rubredoxin; electron tr 47.5 5.5 0.00023 19.5 1.2 26 27-53 5-38 (46)
171 1z34_A Purine nucleoside phosp 47.4 14 0.00058 16.5 3.3 50 108-167 43-94 (235)
172 2jrp_A Putative cytoplasmic pr 47.4 2.6 0.00011 21.9 -0.5 30 27-59 3-32 (81)
173 2yuc_A TNF receptor-associated 46.9 9.2 0.00039 17.8 2.3 19 26-44 16-35 (76)
174 2hf1_A Tetraacyldisaccharide-1 46.8 2.7 0.00011 21.8 -0.5 30 27-57 9-38 (68)
175 1m2o_A SEC23, protein transpor 46.2 9 0.00038 17.9 2.1 34 27-60 56-92 (768)
176 3oow_A Phosphoribosylaminoimid 46.1 11 0.00047 17.2 2.6 41 151-202 79-120 (166)
177 2pk7_A Uncharacterized protein 45.7 2.5 0.00011 22.0 -0.7 30 27-57 9-38 (69)
178 3cw2_K Translation initiation 45.6 2.7 0.00012 21.7 -0.6 35 25-59 102-138 (139)
179 1tfi_A Transcriptional elongat 45.2 2.1 8.9E-05 22.5 -1.2 31 27-57 10-49 (50)
180 2ha9_A UPF0210 protein SP0239; 45.0 15 0.00063 16.2 6.6 95 143-249 129-234 (446)
181 1q68_B Proto-oncogene tyrosine 44.4 7.1 0.0003 18.7 1.4 17 38-54 4-20 (29)
182 1q14_A HST2 protein; histone d 43.5 16 0.00067 16.1 3.2 80 128-221 184-271 (361)
183 2exu_A Transcription initiatio 42.8 9.7 0.00041 17.7 1.9 26 27-54 5-30 (200)
184 1o2d_A Alcohol dehydrogenase, 42.7 16 0.00068 16.0 4.1 92 92-213 56-160 (371)
185 1o4v_A Phosphoribosylaminoimid 42.5 14 0.00057 16.6 2.6 41 151-202 87-128 (183)
186 1s1i_9 L37A, YL35, 60S ribosom 42.4 6.2 0.00026 19.1 0.8 40 19-59 28-67 (91)
187 1nui_A DNA primase/helicase; z 42.3 5.3 0.00022 19.6 0.5 28 28-59 16-47 (255)
188 1tib_A Lipase; hydrolase(carbo 42.0 2.6 0.00011 21.9 -1.1 84 151-235 90-177 (269)
189 1weo_A Cellulose synthase, cat 41.5 5 0.00021 19.8 0.2 31 26-56 35-69 (93)
190 3lqh_A Histone-lysine N-methyl 41.5 13 0.00055 16.7 2.4 32 22-53 17-62 (183)
191 1dx8_A Rubredoxin; electron tr 41.1 5 0.00021 19.8 0.2 51 21-93 3-69 (70)
192 2ywx_A Phosphoribosylaminoimid 41.0 8.5 0.00036 18.1 1.3 42 151-203 70-111 (157)
193 3eh1_A Protein transport prote 41.0 3.3 0.00014 21.1 -0.7 34 26-59 85-120 (751)
194 2elp_A Zinc finger protein 406 40.7 6.6 0.00028 18.9 0.8 13 46-58 10-22 (37)
195 1u11_A PURE (N5-carboxyaminoim 40.5 5.1 0.00021 19.7 0.1 41 151-202 95-136 (182)
196 1rrm_A Lactaldehyde reductase; 40.4 18 0.00074 15.8 5.0 112 66-207 13-146 (386)
197 1zu4_A FTSY; GTPase, signal re 40.0 18 0.00075 15.7 6.7 69 136-207 172-241 (320)
198 3bvo_A CO-chaperone protein HS 39.8 5.1 0.00021 19.7 0.0 45 25-79 9-53 (207)
199 4rxn_A Rubredoxin; electron tr 39.8 5.5 0.00023 19.5 0.2 25 27-53 4-44 (54)
200 2cot_A Zinc finger protein 435 39.6 7.2 0.0003 18.6 0.8 38 27-64 19-65 (77)
201 1vco_A CTP synthetase; tetrame 39.4 18 0.00074 15.7 2.8 65 133-209 362-441 (550)
202 1yk4_A Rubredoxin, RD; electro 39.0 6.2 0.00026 19.1 0.4 25 27-53 3-43 (52)
203 2d74_B Translation initiation 38.6 3.2 0.00014 21.2 -1.1 34 25-58 103-138 (148)
204 1v54_F VI, cytochrome C oxidas 38.5 8.2 0.00035 18.2 1.0 17 42-58 76-92 (98)
205 3lp6_A Phosphoribosylaminoimid 38.4 16 0.00066 16.1 2.4 41 151-202 81-122 (174)
206 1nee_A EIF-2-beta, probable tr 38.3 2.3 9.5E-05 22.4 -1.9 34 25-58 101-136 (138)
207 3brs_A Periplasmic binding pro 38.3 19 0.00079 15.5 4.7 29 252-280 231-262 (289)
208 2nxw_A Phenyl-3-pyruvate decar 37.8 0.36 1.5E-05 28.3 -6.1 125 128-278 420-555 (565)
209 3n9n_A Putative uncharacterize 37.8 11 0.00045 17.4 1.4 33 23-55 55-95 (528)
210 2d9k_A FLN29 gene product; zin 37.7 7.1 0.0003 18.7 0.5 32 26-57 17-55 (75)
211 1wjp_A Zinc finger protein 295 37.4 19 0.00081 15.4 3.4 46 19-64 9-61 (107)
212 2zkr_z 60S ribosomal protein L 37.2 2.9 0.00012 21.6 -1.6 32 25-57 35-66 (92)
213 2h9a_B CO dehydrogenase/acetyl 37.0 11 0.00045 17.3 1.4 125 58-208 75-213 (310)
214 1nrw_A Hypothetical protein, h 37.0 16 0.00066 16.1 2.2 26 141-166 87-112 (288)
215 1uwc_A Feruloyl esterase A; hy 36.7 3 0.00013 21.4 -1.5 71 163-234 90-163 (261)
216 2owo_A DNA ligase; protein/DNA 36.5 6.7 0.00028 18.8 0.3 39 27-69 406-446 (671)
217 1to6_A Glycerate kinase; glyce 36.5 7 0.0003 18.7 0.3 19 181-199 297-315 (371)
218 2f9z_C Protein (chemotaxis met 36.2 20 0.00085 15.3 5.6 81 141-222 64-147 (159)
219 3eh2_A Protein transport prote 35.9 6.2 0.00026 19.1 -0.0 34 26-59 94-130 (766)
220 1gku_B Reverse gyrase, TOP-RG; 35.6 12 0.00052 16.9 1.5 46 27-77 582-630 (1054)
221 2egp_A Tripartite motif-contai 35.3 9.9 0.00042 17.6 1.0 32 19-59 7-38 (79)
222 2k4x_A 30S ribosomal protein S 35.0 3.4 0.00014 21.0 -1.5 31 25-56 17-47 (55)
223 1yn9_A BVP, polynucleotide 5'- 34.5 10 0.00043 17.5 0.9 66 127-194 82-155 (169)
224 2jtq_A Phage shock protein E; 34.5 21 0.0009 15.1 4.2 41 146-200 32-72 (85)
225 3cc2_Z 50S ribosomal protein L 34.3 4.5 0.00019 20.1 -0.9 33 24-57 58-90 (116)
226 2fiy_A Protein FDHE homolog; F 34.2 2.4 0.0001 22.2 -2.4 10 47-56 255-264 (309)
227 1xmp_A PURE, phosphoribosylami 33.7 17 0.00071 15.9 1.9 41 151-202 85-126 (170)
228 3ir9_A Peptide chain release f 33.6 9.9 0.00042 17.6 0.7 32 27-58 79-116 (166)
229 1yfu_A 3-hydroxyanthranilate-3 33.6 6.6 0.00028 18.9 -0.2 36 20-55 116-169 (174)
230 3h7h_A Transcription elongatio 33.6 12 0.00051 17.0 1.2 49 26-77 16-65 (120)
231 1x6h_A Transcriptional repress 33.5 18 0.00074 15.8 2.0 37 27-63 16-65 (86)
232 3g7n_A Lipase; hydrolase fold, 33.3 4.7 0.0002 20.0 -0.9 69 165-234 91-164 (258)
233 1yqw_A Periplasmic [NIFE] hydr 33.1 20 0.00084 15.3 2.2 16 195-210 107-122 (264)
234 2ri7_A Nucleosome-remodeling f 32.9 10 0.00042 17.6 0.7 32 21-52 18-57 (174)
235 1vq8_Z 50S ribosomal protein L 32.9 4.9 0.00021 19.9 -0.9 33 26-59 27-59 (83)
236 1u5k_A Hypothetical protein; O 32.6 8.5 0.00036 18.1 0.3 20 263-282 209-228 (244)
237 1kid_A Groel (HSP60 class); ch 32.4 23 0.00097 14.9 5.6 53 141-206 57-109 (203)
238 3ec1_A YQEH GTPase; atnos1, at 32.4 7.7 0.00032 18.4 0.0 26 27-52 5-43 (369)
239 1zvf_A 3-hydroxyanthranilate 3 32.3 5.2 0.00022 19.7 -0.9 36 21-56 119-172 (176)
240 2gru_A 2-deoxy-scyllo-inosose 32.3 23 0.00097 14.9 2.7 51 142-203 78-130 (368)
241 2h9a_A Carbon monoxide dehydro 31.6 20 0.00086 15.3 2.1 37 27-67 15-57 (445)
242 2f42_A STIP1 homology and U-bo 31.4 24 0.001 14.8 3.6 33 18-59 100-132 (179)
243 1q1a_A HST2 protein; ternary c 30.5 25 0.001 14.7 3.5 23 101-123 117-140 (289)
244 1x6e_A Zinc finger protein 24; 30.1 24 0.001 14.8 2.2 36 27-62 15-59 (72)
245 3mhs_E SAGA-associated factor 29.9 8.6 0.00036 18.0 -0.1 16 44-59 74-89 (96)
246 2x7j_A 2-succinyl-5-enolpyruvy 29.8 0.93 3.9E-05 25.2 -5.1 111 154-282 471-597 (604)
247 1ybh_A Acetolactate synthase, 29.7 22 0.00094 15.0 2.0 62 127-207 423-484 (590)
248 3glr_A NAD-dependent deacetyla 29.4 23 0.00095 14.9 2.0 24 100-123 119-143 (285)
249 1x5w_A Zinc finger protein 64, 29.4 17 0.00073 15.8 1.4 37 27-63 10-55 (70)
250 2i13_A AART; DNA binding, zinc 29.2 21 0.00089 15.2 1.8 34 27-60 22-64 (190)
251 1qxf_A GR2, 30S ribosomal prot 29.2 7.7 0.00032 18.4 -0.4 29 27-55 8-36 (66)
252 2kgg_A Histone demethylase jar 28.8 26 0.0011 14.5 3.4 32 21-52 13-52 (52)
253 2ory_A Lipase; alpha/beta hydr 28.7 5 0.00021 19.8 -1.5 16 198-213 168-183 (346)
254 1wui_S Periplasmic [NIFE] hydr 28.6 27 0.0011 14.4 5.9 25 186-210 98-122 (267)
255 1m2k_A Silent information regu 28.5 13 0.00053 16.8 0.6 16 190-205 201-216 (249)
256 2qjw_A Uncharacterized protein 28.3 8.3 0.00035 18.2 -0.4 131 120-270 4-140 (176)
257 3fzq_A Putative hydrolase; YP_ 28.1 15 0.00064 16.2 0.9 11 249-259 264-274 (274)
258 3ce9_A Glycerol dehydrogenase; 28.0 25 0.0011 14.6 2.0 54 49-106 3-62 (354)
259 3efo_B SEC24 related gene fami 27.7 15 0.00062 16.3 0.8 34 26-59 98-134 (770)
260 1muw_A Xylose isomerase; atomi 27.7 27 0.0012 14.3 7.0 89 92-190 69-168 (386)
261 2k5r_A Uncharacterized protein 27.6 12 0.00049 17.1 0.2 14 44-57 52-65 (97)
262 3iv7_A Alcohol dehydrogenase I 27.4 28 0.0012 14.3 8.1 52 139-204 72-123 (364)
263 3ag6_A Pantothenate synthetase 27.4 28 0.0012 14.3 5.3 45 153-207 20-64 (283)
264 3lpe_B DNA-directed RNA polyme 27.3 19 0.00078 15.6 1.2 19 27-52 2-20 (59)
265 3guz_A Pantothenate synthetase 27.0 28 0.0012 14.2 6.3 72 151-232 17-94 (176)
266 3jyw_9 60S ribosomal protein L 26.8 9.2 0.00038 17.9 -0.4 32 24-56 24-55 (72)
267 2yur_A Retinoblastoma-binding 26.6 27 0.0011 14.4 1.9 38 17-62 8-45 (74)
268 2zkr_2 60S ribosomal protein L 26.5 27 0.0011 14.4 1.9 78 14-136 6-83 (97)
269 2odx_A Cytochrome C oxidase po 26.4 17 0.00071 15.9 0.9 34 25-58 32-69 (80)
270 1vq8_1 50S ribosomal protein L 26.3 20 0.00085 15.3 1.3 33 15-53 8-40 (57)
271 1srv_A Protein (groel (HSP60 c 26.2 29 0.0012 14.1 5.4 66 141-221 39-104 (145)
272 2yt9_A Zinc finger-containing 26.2 25 0.001 14.6 1.7 35 27-61 8-51 (95)
273 1rqg_A Methionyl-tRNA syntheta 25.8 13 0.00053 16.8 0.2 23 29-54 127-149 (722)
274 2k1p_A Zinc finger RAN-binding 25.7 17 0.00073 15.8 0.9 26 22-53 3-28 (33)
275 3h2y_A GTPase family protein; 25.6 12 0.0005 17.0 0.0 27 27-53 5-42 (368)
276 2qpz_A Naphthalene 1,2-dioxyge 25.3 10 0.00043 17.5 -0.4 31 27-57 42-72 (103)
277 1ffk_W Ribosomal protein L37AE 25.2 7.3 0.00031 18.6 -1.2 35 24-59 25-59 (73)
278 2ghf_A ZHX1, zinc fingers and 24.6 21 0.00088 15.2 1.1 38 27-64 19-69 (102)
279 3jyw_Y 60S ribosomal protein L 24.5 22 0.00091 15.1 1.2 25 26-54 15-39 (52)
280 2d9h_A Zinc finger protein 692 24.4 26 0.0011 14.4 1.6 37 27-63 8-56 (78)
281 1ohe_A CDC14B, CDC14B2 phospha 24.1 26 0.0011 14.4 1.5 18 216-233 176-193 (348)
282 1rlm_A Phosphatase; HAD family 23.9 32 0.0013 13.8 2.4 16 22-38 59-74 (271)
283 1twf_L ABC10-alpha, DNA-direct 23.5 29 0.0012 14.1 1.7 31 22-54 24-54 (70)
284 3g1w_A Sugar ABC transporter; 23.3 33 0.0014 13.8 7.2 28 252-279 228-258 (305)
285 2ecw_A Tripartite motif-contai 23.1 9.5 0.0004 17.7 -0.9 32 20-60 15-46 (85)
286 2hc8_A PACS, cation-transporti 23.1 19 0.00079 15.5 0.6 95 185-280 2-109 (113)
287 2qy9_A Cell division protein F 23.0 33 0.0014 13.7 5.1 88 117-207 125-231 (309)
288 2fnf_X Putative RAS effector N 22.9 23 0.00097 14.9 1.0 24 27-55 36-59 (72)
289 2jz8_A Uncharacterized protein 22.8 15 0.00065 16.2 0.1 33 27-59 25-62 (87)
290 1jq5_A Glycerol dehydrogenase; 22.7 33 0.0014 13.7 6.3 58 142-213 73-130 (370)
291 2csh_A Zinc finger protein 297 22.7 28 0.0012 14.2 1.5 14 46-59 38-51 (110)
292 1wem_A Death associated transc 22.7 19 0.00082 15.4 0.6 30 22-51 26-67 (76)
293 3bfj_A 1,3-propanediol oxidore 22.5 34 0.0014 13.7 4.5 113 65-207 14-148 (387)
294 3htk_C E3 SUMO-protein ligase 22.3 16 0.00069 16.0 0.2 34 27-69 182-215 (267)
295 3cov_A Pantothenate synthetase 22.2 34 0.0014 13.6 2.5 69 131-208 7-76 (301)
296 3lkb_A Probable branched-chain 22.1 34 0.0014 13.6 6.0 13 119-131 143-155 (392)
297 1mpp_A Pepsin; hydrolase(acid 22.0 31 0.0013 13.9 1.6 21 22-55 41-61 (361)
298 2row_A RHO-associated protein 22.0 35 0.0015 13.6 3.2 28 27-54 55-82 (84)
299 2avu_E Flagellar transcription 21.8 14 0.00058 16.5 -0.3 27 129-155 80-106 (192)
300 3kv4_A PHD finger protein 8; e 21.6 11 0.00046 17.3 -0.8 31 22-52 16-54 (447)
301 1lv3_A Hypothetical protein YA 21.6 34 0.0014 13.6 1.7 15 23-37 6-20 (68)
302 3kv5_D JMJC domain-containing 21.6 20 0.00083 15.4 0.5 31 22-52 48-86 (488)
303 1rfh_A RAS association (ralgds 21.5 33 0.0014 13.8 1.6 25 27-56 23-47 (59)
304 2kmk_A Zinc finger protein GFI 21.3 30 0.0013 14.0 1.4 13 45-57 57-69 (82)
305 1vlj_A NADH-dependent butanol 21.3 36 0.0015 13.5 5.5 120 64-213 23-163 (407)
306 1ad1_A DHPS, dihydropteroate s 21.3 36 0.0015 13.5 4.7 125 146-273 112-250 (266)
307 1w77_A 2C-methyl-D-erythritol 21.3 34 0.0014 13.6 1.6 17 240-256 210-226 (228)
308 2i2w_A Phosphoheptose isomeras 21.2 36 0.0015 13.5 6.8 64 144-224 121-184 (212)
309 1ard_A Yeast transcription fac 21.1 26 0.0011 14.5 1.0 18 45-62 2-19 (29)
310 2nys_A AGR_C_3712P; SSPB, stri 21.1 36 0.0015 13.5 2.8 29 207-235 83-111 (176)
311 3dfx_A Trans-acting T-cell-spe 20.7 2.7 0.00011 21.8 -4.1 32 27-59 8-42 (63)
312 1ryq_A DNA-directed RNA polyme 20.5 20 0.00086 15.3 0.4 20 27-53 12-31 (69)
313 2jvx_A NF-kappa-B essential mo 20.3 21 0.00088 15.2 0.4 12 45-56 3-14 (28)
314 3mhs_A Ubiquitin carboxyl-term 20.3 15 0.00063 16.3 -0.4 27 26-57 48-74 (476)
315 1o1x_A Ribose-5-phosphate isom 20.2 19 0.00078 15.6 0.1 53 70-125 37-98 (155)
316 2hmc_A AGR_L_411P, dihydrodipi 20.2 37 0.0016 13.3 3.9 18 145-162 82-99 (344)
No 1
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=0 Score=717.22 Aligned_cols=281 Identities=38% Similarity=0.688 Sum_probs=271.5
Q ss_pred CCCCHHHCCCCCC--CCCCCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9620110242234--45422247746010566768722178898633838899896243799999984556542013345
Q gi|254780820|r 1 MNWITNFVRPRIN--SVFGRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQP 78 (284)
Q Consensus 1 MnW~~~~~k~k~~--~~~~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~ 78 (284)
||||+|..|++.. ...+|+++|+|||+|||+|++++|++||++|++|||+|||||||+|||||++|||+|||+|++.+
T Consensus 3 ~~~f~~~~k~~~~~~~~~~k~~~p~~lW~kCp~C~~~i~~~dl~~n~~VCp~C~~H~rl~areRi~~L~D~gsf~Ei~~~ 82 (285)
T 2f9i_B 3 KDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKG 82 (285)
T ss_dssp -----------------------CCSSEEECTTTCCEEEHHHHHHTTTBCTTTCCBCCCCHHHHHHHTSCTTCCEEESTT
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCC
T ss_conf 78750023566666665344789998630288887313299999848889099799865999999998089964981476
Q ss_pred CCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 68702018676420356677666421667716999878704149999983303185357789999999999998628968
Q gi|254780820|r 79 QVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPL 158 (284)
Q Consensus 79 ~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~Pl 158 (284)
+.+.|||+| ++|++|++++++|||++|||++|.|+|+|++|+++++||+|+|||||+++||||+|++|+|+++++|+
T Consensus 83 ~~~~DpL~f---~~Y~~rl~~a~~ktg~~d~vi~g~G~i~g~~v~v~~~Df~f~GGS~g~~~geki~ra~e~A~~~~lP~ 159 (285)
T 2f9i_B 83 MTSANPLDF---PSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPF 159 (285)
T ss_dssp CEECCTTCC---TTHHHHHHHHHHHHCCSSSEEEEEEEETTEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCCCC---CCCCCCHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 567885554---33123227788524988649999999999998865302441578178889899999999998518976
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHH
Q ss_conf 99976888776521246777788999999998629988998567642011112014685255531421102327887876
Q gi|254780820|r 159 VMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQT 238 (284)
Q Consensus 159 I~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t 238 (284)
|.|++|||||||||+.|||||++++.|+++++++|+|||+++++||+||++|||++++||+|+||+|+||||||||||+|
T Consensus 160 I~~~~SGGaRmqeg~~sl~~~~~~~~a~~~~~~~gip~I~v~~~p~~GG~~as~a~~~diii~e~~a~i~faGPrVi~~~ 239 (285)
T 2f9i_B 160 ILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQT 239 (285)
T ss_dssp EEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCEEEEEECHHHHHHH
T ss_conf 99815878184763310455529999999998689976999838845003212231774899857718998787578786
Q ss_pred HCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf 3677887202159999689835373589999999999999723789
Q gi|254780820|r 239 VREKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 239 ~~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~ 284 (284)
+||++|++||+||++++||+||.||+|+|+|++|++||+++.+.++
T Consensus 240 ~ge~~pe~f~~a~~~~~~G~iD~vv~r~e~r~~l~~ll~~~~~~~k 285 (285)
T 2f9i_B 240 INEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK 285 (285)
T ss_dssp HTSCCCTTTTBHHHHHHTTCCSEECCGGGHHHHHHHHHHHTCCSCC
T ss_pred HCCCCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 1898982323458899667867687679999999999996655369
No 2
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=0 Score=692.92 Aligned_cols=280 Identities=46% Similarity=0.805 Sum_probs=272.9
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 96201102422344542224774601056676872217889863383889989624379999998455654201334568
Q gi|254780820|r 1 MNWITNFVRPRINSVFGRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQV 80 (284)
Q Consensus 1 MnW~~~~~k~k~~~~~~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~ 80 (284)
||||+| +|++++. .+|+++|||||+|||+|++++|++||++|+||||+|||||||+|||||++|||+|||+|++.++.
T Consensus 1 M~W~~~-~k~~~~~-~~k~~~p~~lW~kC~~C~~~~~~~~l~~n~~vCp~C~~H~ri~areRi~~l~D~gsf~E~~~~~~ 78 (304)
T 2f9y_B 1 MSWIER-IKSNITP-TRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELE 78 (304)
T ss_dssp ------------------------CEECCTTTCCCEETTHHHHTTTBCTTTCCBCCCCHHHHHHHHSCSSCCEECSCSCC
T ss_pred CCCCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCC
T ss_conf 985312-3445777-54265888762138787763159999984889949989875499999987624983787678767
Q ss_pred CCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 70201867642035667766642166771699987870414999998330318535778999999999999862896899
Q gi|254780820|r 81 CQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVM 160 (284)
Q Consensus 81 ~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~ 160 (284)
+.|||+|+|+++|.||+++++++||++|||++|.|+|+|++|+++++||+|+|||||.++||||.|++|+|+++++|+|.
T Consensus 79 ~~dpl~f~d~~~y~~~l~~~~~~tg~~d~vv~g~G~I~g~~v~v~a~Dft~~GGS~g~~~geKi~ra~e~A~~~~lPlI~ 158 (304)
T 2f9y_B 79 PKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLIC 158 (304)
T ss_dssp CCCSSCCSSGGGTC------CCSSCCSSSEEEEECEETTEECBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 77854565455550668765314488772499999999988899997362322433244445633599999972997699
Q ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHC
Q ss_conf 97688877652124677778899999999862998899856764201111201468525553142110232788787636
Q gi|254780820|r 161 FTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVR 240 (284)
Q Consensus 161 ~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~ 240 (284)
+.+|||+|||||+.|||||+++..++.+++++++|||+|+++||+||++||||+++|++|+||+|+||||||||||+++|
T Consensus 159 l~~SgGaRm~eg~~sl~~~~~~~~~~~~~~~~~iP~I~v~~gp~~GG~~as~a~~~d~ii~~~~a~i~~aGP~Vv~~~~g 238 (304)
T 2f9y_B 159 FSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVR 238 (304)
T ss_dssp EEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHHHT
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCC
T ss_conf 84588803555552000246799999999818997799966896613412636477489995540003658666654307
Q ss_pred CCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 778872021599996898353735899999999999997237
Q gi|254780820|r 241 EKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 241 ~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
|++|++||+||++++||+||.||+|+|++.+|++++++|+.-
T Consensus 239 e~l~e~~g~a~~~~~~G~vD~vv~~~e~a~~l~~~l~~L~~l 280 (304)
T 2f9y_B 239 EKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNL 280 (304)
T ss_dssp SCCCTTTTBHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 738822103799986767108979889999999999997248
No 3
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=100.00 E-value=4.1e-42 Score=331.00 Aligned_cols=212 Identities=25% Similarity=0.329 Sum_probs=185.5
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+|++||||++|+|+|||.|++.-. .|........+++...|+||+|+|+|+|++|+++++||+|+|||
T Consensus 56 kltaRERI~~LlD~gSF~E~g~la------------~~~~~~~~~~~~~~~~dgvV~G~G~I~Gr~vvv~a~D~tv~gGS 123 (548)
T 2bzr_A 56 KLTARERIYALLDEDSFVELDALA------------KHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIFSQDATVFGGS 123 (548)
T ss_dssp CCCHHHHHHHHSCTTCCEEESTTC------------CCCCCSTTGGGCCCTTTTEEEEEEEETTEEEEEEEECTTSGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECHHHC------------CCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCC
T ss_conf 999999999860899864841010------------75666646444568887599999999999999999878770668
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
+|.++++|+.|+.|+|.++++|+|.+.+|||+|||||+.+|+||+++..+. .+...++|+|+++++||+||.++++++.
T Consensus 124 ~g~~~~~Ki~r~~elA~~~~lP~V~l~dSgGarlqeg~~~l~~~~~~~~~~-~~~s~~iP~Isvv~Gp~~gG~a~~~a~~ 202 (548)
T 2bzr_A 124 LGEVYGEKIVKVQELAIKTGRPLIGINDGAGARIQEGVVSLGLYSRIFRNN-ILASGVIPQISLIMGAAAGGHVYSPALT 202 (548)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCGGGTTHHHHHHHHHHHHH-HHTTTTSCEEEEECSEEESGGGHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCHHHHHHHH-HHHCCCCCEEEEECCCCCCCCEEEHHHC
T ss_conf 478899999999999997199879996157755665400143205899999-9975899779996278764413223338
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCC-CCCHHHHHH-HHCCCCCEEECHH-HHHHHHHHHHHHHH
Q ss_conf 85255531421102327887876367788-720215999-9689835373589-99999999999972
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLP-DGFQRSEYL-VEHGMIDRIVHRH-DIPEVVSSLCKILT 280 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp-~~fqtae~l-~~~G~iD~iv~r~-~l~~~i~~ll~il~ 280 (284)
+++|+++++++|+|+||+||++.+||++. ++.+.++.+ .++|.+|.+++.. +--+.+-++|+.|-
T Consensus 203 d~vIm~~~~a~i~~aGP~vv~~atge~~~~eelGga~~h~~~sG~~d~~~~de~~a~~~~r~~ls~lp 270 (548)
T 2bzr_A 203 DFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYLP 270 (548)
T ss_dssp SEEEEETTTCEEESSCHHHHHHHHCCCCCHHHHHBHHHHHHTSSCCSEEESSHHHHHHHHHHHHTTSC
T ss_pred CEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 64899714633650478899997478768566067102640466556877999999999999985357
No 4
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 1xny_A* 1xnv_A* 1xo6_A
Probab=100.00 E-value=1.1e-41 Score=327.84 Aligned_cols=229 Identities=24% Similarity=0.359 Sum_probs=193.7
Q ss_pred HHHHHHCCCCCCCC-------CCE--ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 88986338388998-------962--437999999845565420133456870201867642035667766642166771
Q gi|254780820|r 39 KDLKENQWVISSSD-------FHM--KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDS 109 (284)
Q Consensus 39 ~~l~~n~~VCp~C~-------~H~--rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~da 109 (284)
.||++...-+..+| +|- ||+|||||++|||+|||.|++. |.+.+.|.+. .+.++...|+
T Consensus 19 ~el~~r~~~~~~~g~~~~~~~~~~~gkltaReRi~~LlD~gSF~E~g~---------~a~~~~~~~~---~~~~~~~~dg 86 (530)
T 3iav_A 19 ADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGSFVELDE---------FARHRSTNFG---LDANRPYGDG 86 (530)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEEST---------TCCCCCCGGG---GGGCCCTTTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHH---------HHCCCCCCCC---CCCCCCCCCE
T ss_conf 999999999987189999999997599999999999628998758753---------3275764322---0016688975
Q ss_pred EEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 69998787041499999833031853577899999999999986289689997688877652124677778899999999
Q gi|254780820|r 110 IVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML 189 (284)
Q Consensus 110 vv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l 189 (284)
+|+|+|+|+|++|+++++||+|+|||+|.++++|+.++.++|.++++|+|.+.+|||+|||||+.+|++|.++...+.++
T Consensus 87 vV~G~G~I~Gr~v~v~a~Dftv~gGS~g~~~~~K~~r~~~~A~~~~lP~V~l~~sgGar~~e~~~~~~~~~~~~~~~~~~ 166 (530)
T 3iav_A 87 VVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHA 166 (530)
T ss_dssp EEEEEEEETTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999999999868642408788898999899999986599989995268877665644455530799999986
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCC-CCCHHHHHHH-HCCCCCEEECH-H
Q ss_conf 8629988998567642011112014685255531421102327887876367788-7202159999-68983537358-9
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLP-DGFQRSEYLV-EHGMIDRIVHR-H 266 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp-~~fqtae~l~-~~G~iD~iv~r-~ 266 (284)
+ .++|+|+++++||+||.++++++.+++++++++++|+|+||+||++++||++. ++...++.+. ..|.+|.+++. .
T Consensus 167 s-~~iP~isvv~G~~~gG~A~~~~~~d~~im~~~~a~i~~aGP~vV~~atge~~~~eelGg~~~h~~~sG~~d~~~~de~ 245 (530)
T 3iav_A 167 S-GVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEK 245 (530)
T ss_dssp T-TTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESSCHHHHHHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHH
T ss_pred C-CCCCEEEEEECCCCCCHHHHHHHCCEEEEECCCCEEEECCHHHHHHHCCCCCCHHHCCCHHHEEECCCCCCCCCCCHH
T ss_conf 5-899889996268762454404537716985167508723748889752788881221551221213674320157678
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999972
Q gi|254780820|r 267 DIPEVVSSLCKILT 280 (284)
Q Consensus 267 ~l~~~i~~ll~il~ 280 (284)
+--+.+-.+|+.|-
T Consensus 246 ~a~~~~r~~ls~lp 259 (530)
T 3iav_A 246 DAVEYVKQLLSYLP 259 (530)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHCC
T ss_conf 89999999998665
No 5
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=1.2e-41 Score=327.55 Aligned_cols=212 Identities=21% Similarity=0.305 Sum_probs=182.7
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
||+|||||++|||+|||.|++.... .+.|.. ..+.++...|+||+|.|+|+|++|+++++||+|+|||
T Consensus 53 kltaRERI~~LlD~gSF~E~g~l~~---------~~~~d~---~~~~~~~~~dgvV~G~G~I~Gr~v~v~a~Dftv~GGS 120 (531)
T 3n6r_B 53 KLTARERVDLLLDEGSFEEFDMFVT---------HRCTDF---NMQDQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGS 120 (531)
T ss_dssp CCCHHHHHHHHSSSSCCEEECTTCC---------CCCCGG---GGGGCCCTTTTEEEEEEEETTEEEEEEEECTTSGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECHHHHC---------CCCCCC---CCCCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf 9999999999718998703513435---------466665---5334677897399999999999999999868763307
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
||.++++|+.++.|+|.++++|+|.+.+|||+|||||+.+|+||+++.....++ ..++|+|+++++||+||.++++++.
T Consensus 121 ~g~~~~~K~~ra~e~A~~~~lPlV~l~dsgGarl~eg~~~l~~~~~~~~~~~~~-s~~iP~Isvv~Gp~~Gg~A~~~a~s 199 (531)
T 3n6r_B 121 VSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIMA-SGVVPQISMIMGPCAGGAVYSPAMT 199 (531)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGTHHHHHHHHHHHHHHHHT-TTTSCEEEEECSCCBGGGGHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEEEECCCCHHHHHHHHHC
T ss_conf 887788999999999998499879961478877554522234424899999986-6899889998168750887337668
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCC-CCCHHHHHHHH-CCCCCEEEC-HHHHHHHHHHHHHHHH
Q ss_conf 85255531421102327887876367788-72021599996-898353735-8999999999999972
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLP-DGFQRSEYLVE-HGMIDRIVH-RHDIPEVVSSLCKILT 280 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp-~~fqtae~l~~-~G~iD~iv~-r~~l~~~i~~ll~il~ 280 (284)
+++++++++++|+|+||+||++.++|+++ ++.+.++.+.. .|.+|.+++ ..+.-+.+-++|+.|-
T Consensus 200 d~vim~~~~a~if~aGP~vV~~a~ge~~~~eelGGa~~h~~~sGv~d~~~~de~ea~~~~r~~ls~lp 267 (531)
T 3n6r_B 200 DFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLP 267 (531)
T ss_dssp SEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTTSCCSEEESSHHHHHHHHHHHHTTSC
T ss_pred CEEEEEECCEEEEECCHHHHHHCCCCCCCHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCC
T ss_conf 75899716604883360665300025669477144766420246423662672899999999865335
No 6
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=100.00 E-value=8e-42 Score=328.85 Aligned_cols=210 Identities=28% Similarity=0.386 Sum_probs=187.0
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+++|||||++|+|+|||.|++.- . .|.+.+....+++...|+||+|+|+|+|++|+++++||+|+|||
T Consensus 43 kltaReRI~~LlD~gSF~E~g~~---------~---~~~~~~~~~~~~~~~~dgvv~G~G~I~Gr~v~v~a~D~tv~gGs 110 (523)
T 1on3_A 43 KQTARERLNNLLDPHSFDEVGAF---------R---KHRTTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFTVMGGS 110 (523)
T ss_dssp CCCHHHHHHHHSCTTCCEEECTT---------C---CCCCCTTTTTTCCCGGGGEEEEEEEETTEEEEEEEECTTTGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECHHH---------H---CCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf 99899999996399975574012---------2---75765212345647887499999999999999999758673637
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
+|.++++|+.+++++|.++++|+|.+.+|||+|||||+.+|+||+++..++.+++. .+|+|+++++||+||.+++++ +
T Consensus 111 ~g~~~~~K~~~~~~~A~~~~~P~V~l~dsgG~rl~e~~~~l~~~~~~~~~~~~~sg-~vP~Isvv~G~~~gG~a~~~~-~ 188 (523)
T 1on3_A 111 AGETQSTKVVETMEQALLTGTPFLFFYDSGGARIQEGIDSLSGYGKMFFANVKLSG-VVPQIAIIAGPCAGGASYSPA-L 188 (523)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEEEESGGGHHHH-H
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHCC-CCCEEEEEECCCCCCCEECCC-C
T ss_conf 78888778988999998668988999806898665442203212599999998507-797799970788634020012-3
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCC-CCCHHHHHHH-HCCCCCEEECHHHHHHHHH-HHHHHH
Q ss_conf 85255531421102327887876367788-7202159999-6898353735899999999-999997
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLP-DGFQRSEYLV-EHGMIDRIVHRHDIPEVVS-SLCKIL 279 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp-~~fqtae~l~-~~G~iD~iv~r~~l~~~i~-~ll~il 279 (284)
+|++|+++++.++|+||+||+.+++++++ ++.+.++.+. .+|.+|.+++..+..-.+. ++|+.|
T Consensus 189 ~d~vIm~~~a~l~l~GP~vV~~~~ge~v~~eelGGa~~h~~~sG~~d~v~~de~~a~~~~r~~ls~l 255 (523)
T 1on3_A 189 TDFIIMTKKAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFL 255 (523)
T ss_dssp SSEEEEETTCEEESSCHHHHHHHHCCCCCHHHHHSHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCEEEEECCCHHHHHHCCCCCCHHHCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHC
T ss_conf 8389981560488428087787507867968802587887612766334133257999999998524
No 7
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=2.6e-41 Score=325.10 Aligned_cols=212 Identities=23% Similarity=0.328 Sum_probs=182.2
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
||+|||||++|+|+|||.|++......+... ...+.....|+||+|+|+|||++|+++++||+|+|||
T Consensus 46 kltaRERi~~LlD~gSF~E~g~l~~~~~~~~------------~~~~~~~~~dgvV~G~G~I~Gr~v~v~a~D~tv~gGS 113 (527)
T 1vrg_A 46 KLTAWERLELLLDPGTFVEIDKFVEHRNTYF------------GLDKVKLPRDGVITGVGEINGRKVAVFSQDFTVMGGS 113 (527)
T ss_dssp CCCHHHHHHHHSCTTCCEEECTTCCCCCCGG------------GGGGCCCGGGGEEEEEEEETTEEEEEEEECTTTGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECCCCCCCCCCCC------------CCCCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf 9999999999657998747754315477554------------5334558887189999999999999999878770407
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
+|.++++|+.++.++|.++++|+|.+.+|||+|||||+.+|+||.++..+...+ ..++|+|+++++||+||.++++++.
T Consensus 114 ~g~~~~~k~~~~~~~A~~~~lPlV~l~~sgGar~~eg~~~l~~~g~i~~~~~~~-sg~vP~Isvv~Gp~~GG~A~~~~~~ 192 (527)
T 1vrg_A 114 LGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLA-SGVVPQITVIAGPCAGGAVYSPALT 192 (527)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHH-TTTSCEEEEEEEEEBGGGGHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHC
T ss_conf 788999999999999996599889985578877655542124406999999996-6999889994178760787778868
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCCCCC-HHHHHHH-HCCCCCEEEC-HHHHHHHHHHHHHHHH
Q ss_conf 85255531421102327887876367788720-2159999-6898353735-8999999999999972
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLPDGF-QRSEYLV-EHGMIDRIVH-RHDIPEVVSSLCKILT 280 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp~~f-qtae~l~-~~G~iD~iv~-r~~l~~~i~~ll~il~ 280 (284)
+++|+++++|+|+|+||+||++.++|+++++. ..++.+. ..|.+|.+++ ..+.-+.+-++|+.|-
T Consensus 193 d~vim~~~~a~i~~aGP~vV~~~tGe~v~~eelGG~~~h~~~sG~~~~~~~~e~~a~~~~r~~ls~lp 260 (527)
T 1vrg_A 193 DFIVMVDQTARMFITGPNVIKAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLP 260 (527)
T ss_dssp SEEEEETTTCBCBSSCHHHHHHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTSC
T ss_pred CEEEEECCCCEEEECCHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHCC
T ss_conf 85899617745871477889886076258565576047642255530542114779999999998578
No 8
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=100.00 E-value=1e-40 Score=320.68 Aligned_cols=213 Identities=25% Similarity=0.388 Sum_probs=184.2
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
||+|||||++|||+|||.|++. |.+.+.|.+++ .+++...|+||+|.|+|+|++|+++++||+|+|||
T Consensus 39 kltaRERi~~LlD~gSF~E~~~---------~~~~~~~~~~~---~~~~~~~dgvv~G~G~I~Gr~v~v~a~D~tv~gGS 106 (522)
T 1x0u_A 39 KLTARERLALLFDDGKFNEIMT---------FATTRATEFGL---DKQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGS 106 (522)
T ss_dssp CCCHHHHHHHHSSSSCCEESSS---------SCCCCCCGGGT---TTCCCTTTTEEEEEEEETTEEEEEEEECTTTGGGC
T ss_pred CCCHHHHHHHHCCCCCCEECHH---------HHCCCCCCCCC---CCCCCCCCEEEEEEEEECCEEEEEEEECCCEECCC
T ss_conf 9999999999658997558352---------21646553354---34568898599999999999999999878550427
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
+|.++++|+.++.|+|.++++|+|.+.+|||+|||||+.||++++++... ..+...++|+|+++++||+||.++++++.
T Consensus 107 ~g~~~~~K~~~a~e~A~~~~lPlV~l~~SgGar~~eg~~~l~~~~~~~~~-~~~~s~~iP~Isvv~G~~~gG~a~~~~~~ 185 (522)
T 1x0u_A 107 LGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKM-NVMASGVIPQITIMAGPAAGGAVYSPALT 185 (522)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHH-HHHHTTTSCEEEEECSEEEGGGGHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCCCEEEEECCCCCCCHHHHHHHC
T ss_conf 78778578679999998559998999678887777652002342178999-99975899779981478871052326646
Q ss_pred CCEEEEECCC-EEECCCHHHHHHHHCCCCC-CCCHHHHHH-HHCCCCCEEEC-HHHHHHHHHHHHHHHHC
Q ss_conf 8525553142-1102327887876367788-720215999-96898353735-89999999999999723
Q gi|254780820|r 216 GDIHLAEPGA-EIGFAGRRVIEQTVREKLP-DGFQRSEYL-VEHGMIDRIVH-RHDIPEVVSSLCKILTK 281 (284)
Q Consensus 216 gDiiiaep~a-~igFaG~rVi~~t~~~~lp-~~fqtae~l-~~~G~iD~iv~-r~~l~~~i~~ll~il~~ 281 (284)
+++++.|+.+ .++++||||+++.++|+++ ++...++.+ ..+|.+|.+++ ..+.-+.+-++|+.|-.
T Consensus 186 d~vim~~~~~~~~flaGP~vv~~~~ge~~~~~elGga~~h~~~sG~~d~v~~de~~a~~~~r~~ls~lp~ 255 (522)
T 1x0u_A 186 DFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPS 255 (522)
T ss_dssp SEEEEECSTTCEEESSCHHHHHHTTCCCCCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSCS
T ss_pred CCEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 7212204762378741641013202554461013443354421686410045368999999999974887
No 9
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=1.7e-35 Score=281.97 Aligned_cols=205 Identities=16% Similarity=0.210 Sum_probs=171.6
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+|+|||||+.|+|+|||.|++......+ +++ -.|+||+|+|+|+|++|+++++||+|+|||
T Consensus 61 kltaRERI~~LlD~gSF~E~~~l~~~~~------------------~~~-~~~gvV~G~G~I~Gr~V~V~a~D~tv~gGS 121 (588)
T 3gf3_A 61 QLSAMQRINALIDPGTWCPLNSLFNPEN------------------NKF-GTTNIVNGLGRVDGKWVYIVASDNKKMAGA 121 (588)
T ss_dssp CCCHHHHHHHHSCTTCCEEESTTCCTTC------------------CTT-SSCSEEEEEEEETTEEEEEEEECTTSGGGC
T ss_pred CCCHHHHHHHHCCCCCCCCCHHHHHCCC------------------CCC-CCCCEEEEEEEECCEEEEEEEECCCCCCCC
T ss_conf 9999999999658997501266672046------------------888-998689999999999999999978211569
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH---HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
Q ss_conf 577899999999999986289689997688877652124677778---89999999986299889985676420111120
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLP---RTTIAINMLKDAGLPYIVVLTNPTTGGVTASY 212 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMa---kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~ 212 (284)
+|.++++|+.|+.++|.+.++|+|.+.+|||+||||+...+.+|. ++..+..+++..++|+|+++.+||+||.+++
T Consensus 122 ~g~~~~~K~~r~~e~A~~~~lP~V~l~dsgGaRl~e~~~~~~~~~~~g~~~~~~~~~s~~~iP~Isvv~G~~~gG~a~~- 200 (588)
T 3gf3_A 122 WVPGQAENLIRCSDAAKMMHLPLIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYH- 200 (588)
T ss_dssp BCTTHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE-
T ss_conf 7878989999999999985989799944787666654223530444438999999985699977999457766665301-
Q ss_pred CCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCH--------------------HHHHHH-HCCCCCEEEC-HHHHHH
Q ss_conf 146852555314211023278878763677887202--------------------159999-6898353735-899999
Q gi|254780820|r 213 AMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQ--------------------RSEYLV-EHGMIDRIVH-RHDIPE 270 (284)
Q Consensus 213 a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fq--------------------tae~l~-~~G~iD~iv~-r~~l~~ 270 (284)
++.+|++|++++++|+|+||+||+..+++...+++. .++.+. ++|.+|.+++ ..+--+
T Consensus 201 a~s~~~ii~~~~a~i~l~GP~vv~~~~g~~~~~~~~g~~~~~~~~~~e~l~~~~lgga~~h~~~sGv~d~va~de~~a~~ 280 (588)
T 3gf3_A 201 SISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFFREVYQNDLGVID 280 (588)
T ss_dssp HHSSSEEEEETTCEEESSCCC---------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCSCEEESSHHHHHH
T ss_pred ECCCCCCEEECCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 20465323524347997282353035774334311245554300222210234577435442024654102478799999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999972
Q gi|254780820|r 271 VVSSLCKILT 280 (284)
Q Consensus 271 ~i~~ll~il~ 280 (284)
.+.++|+.|-
T Consensus 281 ~~r~~ls~lp 290 (588)
T 3gf3_A 281 GIKKYISYLP 290 (588)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHCC
T ss_conf 8888984488
No 10
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=1.8e-33 Score=267.01 Aligned_cols=205 Identities=16% Similarity=0.191 Sum_probs=167.5
Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 43799999984556542013345687020186764203566776664216677169998787041499999833031853
Q gi|254780820|r 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 56 rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+|+|||||++|+|+|||.|++...... + .++ -.|+||+|+|+|+|++|+++++||+|+|||
T Consensus 60 kltaReRI~~L~D~gSF~E~~~l~~~~------~------------~~~-~~~~vV~G~G~I~Gr~v~v~a~D~tv~gGs 120 (587)
T 1pix_A 60 ELTALQRIEKLVEPGSWRPLNTLFNPQ------G------------NKN-GSVAIVKGLGRVNGKWCVVVASDNKKLAGA 120 (587)
T ss_dssp CCCHHHHHHHHSCTTCCEEESTTCCTT------C------------CTT-SCCSEEEEEEEETTEEEEEEEECTTTTTTE
T ss_pred CCCHHHHHHHHCCCCCCCCCHHHHHHC------C------------CCC-CCCEEEEEEEEECCEEEEEEEECCCCCCCC
T ss_conf 999999999854999630231445303------6------------889-997599999999999999999868211508
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH---HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
Q ss_conf 577899999999999986289689997688877652124677778---89999999986299889985676420111120
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLP---RTTIAINMLKDAGLPYIVVLTNPTTGGVTASY 212 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMa---kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~ 212 (284)
+|..+++|+.|+.++|.+.++|+|.+.+|||+||||+...+.++. +....+.+++..++|+|+++.+||+||.+++
T Consensus 121 ~g~~~~~K~~r~~~lA~~~~lP~I~l~ds~Garl~e~~~~~~~~~~~g~~~~~~~~~s~~~vP~Isvv~G~~~gGgA~~- 199 (587)
T 1pix_A 121 WVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYH- 199 (587)
T ss_dssp ECTTHHHHHHHHHHHHHHHTCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHH-
T ss_conf 7878989999999999982999899955788766651344100545649999999984699856750357867642011-
Q ss_pred CCCCCEEEEECCCEEECCCHHHHHHHHCCCCC------------------CCCHHHHHHH-HCCCCCEEECHH-HHHHHH
Q ss_conf 14685255531421102327887876367788------------------7202159999-689835373589-999999
Q gi|254780820|r 213 AMLGDIHLAEPGAEIGFAGRRVIEQTVREKLP------------------DGFQRSEYLV-EHGMIDRIVHRH-DIPEVV 272 (284)
Q Consensus 213 a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp------------------~~fqtae~l~-~~G~iD~iv~r~-~l~~~i 272 (284)
++.+|++++.++++|+++||+||+...++..+ +....++.+. ..|.+|.+++.. +--+.+
T Consensus 200 ~~s~~~ii~~~~s~i~laGP~vi~~~~~~~~~~~~~~~~v~~~~g~~~~~e~LGGa~iH~~~sGv~d~va~de~~a~~~i 279 (587)
T 1pix_A 200 SISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYTETGFMREVYASEEGVLEGI 279 (587)
T ss_dssp HHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTTTSCCSCEEESSHHHHHHHH
T ss_pred HHHCEEEEEECCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEECCHHHHHHHH
T ss_conf 00021688724437995070564203443322323442011000443441025624343310487641224679999999
Q ss_pred HHHHHHHH
Q ss_conf 99999972
Q gi|254780820|r 273 SSLCKILT 280 (284)
Q Consensus 273 ~~ll~il~ 280 (284)
.++|+.|-
T Consensus 280 r~~ls~lP 287 (587)
T 1pix_A 280 KKYVGMLP 287 (587)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHCC
T ss_conf 99986475
No 11
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.95 E-value=4e-26 Score=212.77 Aligned_cols=172 Identities=20% Similarity=0.199 Sum_probs=145.0
Q ss_pred CCCEEEEEEEE------ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC--CCCHHHHHH
Q ss_conf 77169998787------0414999998330318535778999999999999862896899976888776--521246777
Q gi|254780820|r 107 IDSIVSAVGNV------RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM--QEGILSLMQ 178 (284)
Q Consensus 107 ~davv~G~G~I------~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM--qEG~~sL~q 178 (284)
+.++|++.+++ +|++|+++++||+|+|||+|.++++||.++.|+|.++++|+|.+++|||||| ||++++|+|
T Consensus 86 ~~g~V~~~~~~~tpe~p~GR~vvVianD~T~~gGS~G~~~~~ki~~a~elA~~~glP~I~l~~sgGARi~~~eev~~~~~ 165 (758)
T 3k8x_A 86 AIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQ 165 (758)
T ss_dssp SSSEEEEEEEECCSSCTTCEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCCCCGGGTTTCE
T ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCC
T ss_conf 61269779896898688996899998847620657888999999999999998399989996588868643201023321
Q ss_pred HH-------------------------------------------------------------------HHHHHHHHHHH
Q ss_conf 78-------------------------------------------------------------------89999999986
Q gi|254780820|r 179 LP-------------------------------------------------------------------RTTIAINMLKD 191 (284)
Q Consensus 179 Ma-------------------------------------------------------------------kt~~a~~~l~~ 191 (284)
|+ .+..+..+..
T Consensus 166 va~~~~~~p~~G~~ylyl~~e~~~~l~~~~~~~~v~~~~~~~~Ge~~~~i~~iiG~~~~~GVe~L~g~G~I~~~~s~as- 244 (758)
T 3k8x_A 166 VAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAY- 244 (758)
T ss_dssp EEESSTTCGGGCEEEEEECHHHHHHHHHTTCGGGEEEEEEEETTEEEEEEEEECCSSSCSSHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-
T ss_conf 1346766733475520136677766642034562022101357764200034446545555200045579999987661-
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCCC---CCHHHHHHHHCCCCCEEECHHH-
Q ss_conf 299889985676420111120146852555314211023278878763677887---2021599996898353735899-
Q gi|254780820|r 192 AGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPD---GFQRSEYLVEHGMIDRIVHRHD- 267 (284)
Q Consensus 192 ~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~---~fqtae~l~~~G~iD~iv~r~~- 267 (284)
..+|+|+++++||+||.+++++ ++|++|+.+++.|+|+||++++++++++... +.+.++....+|.+|.+++..+
T Consensus 245 ~~iP~Is~V~G~~~GggAy~~~-l~D~vImv~~~~i~ltGp~av~k~~G~ev~~~~~~~G~~~~~~~nGv~d~~a~dd~e 323 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVR-LGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNNGVSHLTAVDDLA 323 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHH-HTCEEEEETTCCEESSCHHHHHHHHTSCCCSCTHHHHSHHHHTTTTSSSEEESSHHH
T ss_pred CCCCEEEEEECCCCCHHHHHHH-CCCCEEEECCCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCHHH
T ss_conf 2576799970676523565322-056026636853899785788887457255665454257676346640586446788
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999972
Q gi|254780820|r 268 IPEVVSSLCKILT 280 (284)
Q Consensus 268 l~~~i~~ll~il~ 280 (284)
--..+-++|+.+-
T Consensus 324 ai~~ir~~lsylP 336 (758)
T 3k8x_A 324 GVEKIVEWMSYVP 336 (758)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999871288
No 12
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=99.94 E-value=7.9e-26 Score=210.58 Aligned_cols=171 Identities=16% Similarity=0.139 Sum_probs=143.7
Q ss_pred CCCEEEEEEEE------ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC--CCCCHH----
Q ss_conf 77169998787------041499999833031853577899999999999986289689997688877--652124----
Q gi|254780820|r 107 IDSIVSAVGNV------RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGAR--MQEGIL---- 174 (284)
Q Consensus 107 ~davv~G~G~I------~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaR--MqEG~~---- 174 (284)
+.++|+|.+++ +|++|++++.||+|+|||+|..+++||.++.|+|.+.++|+|.+.+||||| |||++.
T Consensus 76 ~~gmV~~~~~~~t~~~~~GR~vvvianD~T~~~GS~g~~~~~k~~~a~elA~~~~lP~I~l~~ssGARi~~~e~~~~~~~ 155 (760)
T 3ff6_A 76 EVGMVAFKMRFKTQEYPEGRDVIVIGNDITFRIGSFGPGEDLLYLRASEMARAEGIPKIYVAANSGARIGMAEEIKHMFH 155 (760)
T ss_dssp SSSEEEEEEEECCSSCTTCEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEECCCCBCCCCCHHHHTTCE
T ss_pred CCCEEEEEEEECCCCCCCCCEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 61359689986798786980899999847640547878999999999999998499889995478868643221111232
Q ss_pred ------------------------------------------------------------HHHHHHHHHHHHHHHHHCCC
Q ss_conf ------------------------------------------------------------67777889999999986299
Q gi|254780820|r 175 ------------------------------------------------------------SLMQLPRTTIAINMLKDAGL 194 (284)
Q Consensus 175 ------------------------------------------------------------sL~qMakt~~a~~~l~~~~l 194 (284)
+|.+.+.+..+..+. ..++
T Consensus 156 va~~~~~~~~~G~~yly~t~~~~~~~~~~~~v~~~~~~~~ge~~~~i~~iig~~~~~GVe~L~g~g~i~~~~s~a-~~~I 234 (760)
T 3ff6_A 156 VAWVDPEDPHKGFKYLYLTPQDYTRISSLNSVHCKHIEEGGESRYMITDIIGKDDGLGVENLRGSGMIAGESSLA-YEEI 234 (760)
T ss_dssp EEESCTTCTTSCEEEEEECHHHHHHHHTTTCEEEEEECGGGCCEEEEEEECCSSSSSSHHHHHHHHHHHHHHHHH-HHHS
T ss_pred CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCC
T ss_conf 134577774456212205778887654136420110024776421002333665565500267779999999975-4789
Q ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHCCCC---CCCCHHHHHHHHCCCCCEEECHHHH-HH
Q ss_conf 8899856764201111201468525553142110232788787636778---8720215999968983537358999-99
Q gi|254780820|r 195 PYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKL---PDGFQRSEYLVEHGMIDRIVHRHDI-PE 270 (284)
Q Consensus 195 P~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~l---p~~fqtae~l~~~G~iD~iv~r~~l-~~ 270 (284)
|+|+++++||+||.+++.+ ++|++|+.+++.|+|+||+|+++.+|++. ++..+.++....+|.+|.+++..+- -.
T Consensus 235 ptis~V~G~~~GggAyl~~-L~d~~I~~~~s~i~LtGp~vl~~~~G~ev~~s~e~~Gg~~~~~~nGvad~~a~dd~eai~ 313 (760)
T 3ff6_A 235 VTISLVTCRAIGIGAYLVR-LGQRVIQVENSHIILTGASALNKVLGREVYTSNNQLGGVQIMHYNGVSHITVPDDFEGVY 313 (760)
T ss_dssp CEEEEESSCEETHHHHHHH-HHCEEEEETTCBEESSCHHHHHHHHSSCCCCCHHHHHBHHHHTTTTSSSEEESSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHH-CCCEEEEECCCEEEEECCHHHHHHCCCCCCCCCHHCCHHHHHCCCCCCCEEECCHHHHHH
T ss_conf 8899971686515664321-064378757835885184777653586304780321705553347776601168899999
Q ss_pred HHHHHHHHH
Q ss_conf 999999997
Q gi|254780820|r 271 VVSSLCKIL 279 (284)
Q Consensus 271 ~i~~ll~il 279 (284)
.+-++|+.+
T Consensus 314 ~ir~~ls~l 322 (760)
T 3ff6_A 314 TILEWLSYM 322 (760)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHC
T ss_conf 999998637
No 13
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 1xny_A* 1xnv_A* 1xo6_A
Probab=99.74 E-value=1.1e-15 Score=135.46 Aligned_cols=204 Identities=19% Similarity=0.276 Sum_probs=159.5
Q ss_pred CCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEE
Q ss_conf 83889989624379999998455654201334568702018676420356677666421667716999878704149999
Q gi|254780820|r 46 WVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAV 125 (284)
Q Consensus 46 ~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~ 125 (284)
.+-| .+..-+...|+-|+.++|.++|.|+.. .| ..++|||.++|+|++|.+.
T Consensus 286 ~ivP-~~~~~~yd~r~vi~~i~D~~~f~E~~~--------------~~-------------g~~ivtg~arl~G~~VGvi 337 (530)
T 3iav_A 286 TIVP-DSANQPYDMHSVIEHVLDDAEFFETQP--------------LF-------------APNILTGFGRVEGRPVGIV 337 (530)
T ss_dssp GSSC-SSTTCCCCHHHHHHTTSGGGCCEEEST--------------TS-------------CTTEEEEEEEETTEEEEEE
T ss_pred CCCC-CCCCCCCCCHHHCEEEEECCCCEEECC--------------CC-------------CCCEEEEEEEECCEEEEEE
T ss_conf 0377-878998740400667775663222024--------------55-------------8852788999877589997
Q ss_pred EEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 98330318535778999999999999862896899976888776-----5212467777889999999986299889985
Q gi|254780820|r 126 VHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAINMLKDAGLPYIVVL 200 (284)
Q Consensus 126 ~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl 200 (284)
+.|..+.+|.+....++|.+|.++.|-+.++|||.|.+.-|.-. +.|++ --.++. +..+..+.+|.|+|+
T Consensus 338 An~p~~~~G~~~~~~a~Kaarfi~lcd~~~iPlv~lvDtpGf~~G~~~E~~G~~--~~gA~l---~~a~a~~~vP~isvi 412 (530)
T 3iav_A 338 ANQPMQFAGCLDITASEKAARFVRTCDAFNVPVLTFVDVPGFLPGVDQEHDGII--RRGAKL---IFAYAEATVPLITVI 412 (530)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHH--HHHHHH---HHHHHHCCSCEEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH--HHHHHH---HHHHHHCCCCEEEEE
T ss_conf 557322368878556999999999986369965899744676788899997699--999999---999983899869999
Q ss_pred CCCCCCEEEEEECCC-----CCEEEEECCCEEECCCHHHHHHHH-CCCC---CCCC--H-------------HHHHHHHC
Q ss_conf 676420111120146-----852555314211023278878763-6778---8720--2-------------15999968
Q gi|254780820|r 201 TNPTTGGVTASYAML-----GDIHLAEPGAEIGFAGRRVIEQTV-REKL---PDGF--Q-------------RSEYLVEH 256 (284)
Q Consensus 201 ~~pt~GGv~AS~a~l-----gDiiiaep~a~igFaG~rVi~~t~-~~~l---p~~f--q-------------tae~l~~~ 256 (284)
++..+||. .++|. .|+++|-|.|.++.-||.---..+ +.++ +++- + .+....++
T Consensus 413 igka~Ggg--~~am~~~~~~~d~~~AwP~a~~~vm~~egaa~i~~r~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 490 (530)
T 3iav_A 413 TRKAFGGA--YVVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAER 490 (530)
T ss_dssp EEEEEHHH--HHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSSSHHHHHT
T ss_pred ECCCCCHH--HHHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHC
T ss_conf 89854088--7874244568887999687759716999999999765564277778999999999999885698999874
Q ss_pred CCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9835373589999999999999723789
Q gi|254780820|r 257 GMIDRIVHRHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 257 G~iD~iv~r~~l~~~i~~ll~il~~~~~ 284 (284)
|++|.||++.|.|+.|..-|.+|..|.+
T Consensus 491 ~~vD~vIdP~dtR~~L~~~L~~l~~k~~ 518 (530)
T 3iav_A 491 GYVDAVIMPSDTRRHIVRGLRQLRTKRE 518 (530)
T ss_dssp TSSSEECCGGGHHHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 7878747899999999999999861665
No 14
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=99.73 E-value=1.6e-15 Score=134.44 Aligned_cols=200 Identities=22% Similarity=0.297 Sum_probs=158.0
Q ss_pred CCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHH
Q ss_conf 89624379999998455654201334568702018676420356677666421667716999878704149999983303
Q gi|254780820|r 52 DFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSF 131 (284)
Q Consensus 52 ~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F 131 (284)
+..-+...|+-++.++|.++|.|+... | ..+++||.++|+|++|.+.+.+...
T Consensus 284 ~~~~~yd~r~vi~~i~D~~~f~E~~~~--------------~-------------g~~vvtg~arl~G~~VGvvAn~p~~ 336 (522)
T 1x0u_A 284 DAAKPYNMREIIYKIVDNGEFLEVHKH--------------W-------------AQNIIVGFARIAGNVVGIVANNPEE 336 (522)
T ss_dssp SSSCCCCHHHHHHHHSGGGCCEEETTT--------------S-------------CTTEEEEEEEETTEEEEEEEECTTT
T ss_pred CCCCCCCCHHHEEEECCCCCEEEEECC--------------C-------------CCCEEEEEEEECCCEEEEECCCCCC
T ss_conf 668777705420364157734776437--------------5-------------7846788888869266897778644
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 18535778999999999999862896899976888776---521246777788999999998629988998567642011
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
+||.+.....+|.+|.+..|-..++|||.+.+.-|.-. +|-.--+-..++... .+..+..|.|+|++...+||
T Consensus 337 ~~G~~~~~~a~Kaarfi~lcd~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~ga~~~~---a~a~~~vP~isvi~~~~~Gg- 412 (522)
T 1x0u_A 337 FGGSIDIDAADKAARFIRFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLY---AFAEATVPKITVIVRKSYGG- 412 (522)
T ss_dssp GGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHH---HHHHCCSCEEEEEEEEEEHH-
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH---HHHHCCCCEEEEEECCCCCH-
T ss_conf 67877737799999999733002754799842787777679999729999999999---99838998799986765466-
Q ss_pred EEEECCC-----CCEEEEECCCEEECCCHHHHHHHH-CCCC-----CCCC--H----------HHHHHHHCCCCCEEECH
Q ss_conf 1120146-----852555314211023278878763-6778-----8720--2----------15999968983537358
Q gi|254780820|r 209 TASYAML-----GDIHLAEPGAEIGFAGRRVIEQTV-REKL-----PDGF--Q----------RSEYLVEHGMIDRIVHR 265 (284)
Q Consensus 209 ~AS~a~l-----gDiiiaep~a~igFaG~rVi~~t~-~~~l-----p~~f--q----------tae~l~~~G~iD~iv~r 265 (284)
+.++|. .|+++|-|.|.++.-||.-.-.++ +.++ |++. + ++....+.|.||.||++
T Consensus 413 -g~~am~~~~~~~d~~~awP~a~~~vm~pEgaa~i~~r~~l~~a~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VIdP 491 (522)
T 1x0u_A 413 -AHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVIEP 491 (522)
T ss_dssp -HHHHTCCGGGTCSEEEECTTCEEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHHHTTSSSEECCG
T ss_pred -HHHHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECH
T ss_conf -7775426677888799967577984599999999867656437898999999999999875799999866885732887
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999972378
Q gi|254780820|r 266 HDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 266 ~~l~~~i~~ll~il~~~~ 283 (284)
.|.|..|...|+++..|.
T Consensus 492 ~~tR~~l~~~L~~~~~k~ 509 (522)
T 1x0u_A 492 KDTRRVIVAGLEMLKTKR 509 (522)
T ss_dssp GGHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999976276
No 15
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=99.72 E-value=3.1e-15 Score=132.21 Aligned_cols=206 Identities=20% Similarity=0.253 Sum_probs=159.3
Q ss_pred HCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEE
Q ss_conf 33838899896243799999984556542013345687020186764203566776664216677169998787041499
Q gi|254780820|r 44 NQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLV 123 (284)
Q Consensus 44 n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vv 123 (284)
-+.+.|. +.--....|+-|+.++| ++|.|+.. .| ..++|||.++|+|++|.
T Consensus 300 l~~~iP~-~~~~~yd~r~vi~~i~D-~sf~E~~~--------------~~-------------g~~~vtg~aRl~G~~VG 350 (548)
T 2bzr_A 300 LDTLIPD-SPNQPYDMHEVITRLLD-DEFLEIQA--------------GY-------------AQNIVVGFGRIDGRPVG 350 (548)
T ss_dssp GGGTSCS-STTCCCCTHHHHHHHSS-SCCEEEST--------------TS-------------STTEEEEEEEETTEEEE
T ss_pred HHHHCCC-CCCCCCCHHHHHHHHHC-CCCCEECC--------------CC-------------CCCEEEEEEEECCCEEE
T ss_conf 7630677-89986628766576616-86211046--------------65-------------68645899997694799
Q ss_pred EEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9998330318535778999999999999862896899976888776---5212467777889999999986299889985
Q gi|254780820|r 124 AVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGLPYIVVL 200 (284)
Q Consensus 124 v~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl 200 (284)
+.+.+..++||.+.....+|..|.++.|-..++|||.|.+.-|.-. +|-.--+-..++.. ..+..+.+|.|+|+
T Consensus 351 viAn~~~~~~G~l~~~aa~Kaarfi~lcd~f~iPlv~lvD~pGf~~G~~~E~~gi~~~ga~l~---~A~a~a~vP~itvi 427 (548)
T 2bzr_A 351 IVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLL---YAYGEATVPKITVI 427 (548)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHH---HHHHHCCSCEEEEE
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH---HHHHHCCCCEEEEE
T ss_conf 981564133678780678999999999874389816997489878768999974999999999---99982898869999
Q ss_pred CCCCCCEEEEEECCC-----CCEEEEECCCEEECCCHHHHHHHH-CCCC---------CC--------CC----HHHHHH
Q ss_conf 676420111120146-----852555314211023278878763-6778---------87--------20----215999
Q gi|254780820|r 201 TNPTTGGVTASYAML-----GDIHLAEPGAEIGFAGRRVIEQTV-REKL---------PD--------GF----QRSEYL 253 (284)
Q Consensus 201 ~~pt~GGv~AS~a~l-----gDiiiaep~a~igFaG~rVi~~t~-~~~l---------p~--------~f----qtae~l 253 (284)
+...+||. .++|. .|+++|-|.|.++.-||.--..++ +.++ ++ .| -++.+.
T Consensus 428 ~rka~G~g--~~am~~~~~~~d~~~AwP~a~~~vm~~egaa~i~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a 505 (548)
T 2bzr_A 428 TRKAYGGA--YCVMGSKDMGCDVNLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVNPYVA 505 (548)
T ss_dssp EEEEEHHH--HHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSBSHHH
T ss_pred ECCCCCHH--HHHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 78865457--6652576678887998576548507999999999899987511166587899999999999864799999
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 968983537358999999999999972378
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
.++|.||.||++.|.|..|...|+++.+|.
T Consensus 506 a~~~~iD~VIdP~dTR~~L~~~l~~~~~k~ 535 (548)
T 2bzr_A 506 AERGYVGAVIPPSHTRGYIGTALRLLERKI 535 (548)
T ss_dssp HHTTSSSEECCGGGHHHHHHHHHHHTTTC-
T ss_pred HHCCCCCCEECHHHHHHHHHHHHHHHHCCC
T ss_conf 872887803778999999999999986156
No 16
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114}
Probab=99.71 E-value=1.4e-15 Score=134.70 Aligned_cols=202 Identities=17% Similarity=0.280 Sum_probs=159.0
Q ss_pred CCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
Q ss_conf 38899896243799999984556542013345687020186764203566776664216677169998787041499999
Q gi|254780820|r 47 VISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVV 126 (284)
Q Consensus 47 VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~ 126 (284)
+.| .+.-.+...|+-|+.++|+++|.|+... | ..+++||.++|+|++|.+.+
T Consensus 293 ~vP-~d~~~~yd~r~ii~~~~D~~~f~E~~~~--------------~-------------g~~ivtg~aRi~G~~VGivA 344 (531)
T 3n6r_B 293 LVP-DNPNTPYDMKELIHKLADEGDFYEIQEE--------------F-------------AKNIITGFIRLEGRTVGVVA 344 (531)
T ss_dssp TSC-SSTTCCCCHHHHHHHHSTTSCCEEESTT--------------S-------------STTEEEEEEEETTEEEEEEE
T ss_pred CCC-CCCCCCCCHHHHHHHCCCCCCCEEEECC--------------C-------------CCCCEEEEEEECCCEEEEEC
T ss_conf 478-9998865367652212567510231304--------------1-------------77614688898696799982
Q ss_pred EECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 8330318535778999999999999862896899976888776-----52124677778899999999862998899856
Q gi|254780820|r 127 HEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAINMLKDAGLPYIVVLT 201 (284)
Q Consensus 127 ~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~ 201 (284)
.|..++||.+.....+|.+|.++.|-+.++|||.|.+.-|.-. +.|++- -.+| .+..+..+.+|.|+|++
T Consensus 345 n~~~~~~G~~~~~~a~Kaarfi~lcd~f~iPlv~lvD~pGf~~G~~aE~~Giir--~ga~---l~~A~a~a~vP~itvi~ 419 (531)
T 3n6r_B 345 NQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVIK--HGAK---LLYAYGEATVPMVTVIT 419 (531)
T ss_dssp ECTTTGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCSHHHHHTTHHH--HHHH---HHHHHHHCCSCEEEEEE
T ss_pred CCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH--HHHH---HHHHHHCCCCCEEEEEE
T ss_conf 451102687304689999999997875288369994488878898999986999--9999---99999718999899997
Q ss_pred CCCCCEEEEEECCC-----CCEEEEECCCEEECCCHHHHHHHH-CCCC--CCCC--HHH---------HHHHHCCCCCEE
Q ss_conf 76420111120146-----852555314211023278878763-6778--8720--215---------999968983537
Q gi|254780820|r 202 NPTTGGVTASYAML-----GDIHLAEPGAEIGFAGRRVIEQTV-REKL--PDGF--QRS---------EYLVEHGMIDRI 262 (284)
Q Consensus 202 ~pt~GGv~AS~a~l-----gDiiiaep~a~igFaG~rVi~~t~-~~~l--p~~f--qta---------e~l~~~G~iD~i 262 (284)
...+||.+ ++|. .|+++|-|.|.++.-||.--.+.+ +.++ |+.. +.+ .+..+.|+||.|
T Consensus 420 rka~Gga~--~am~~~~~~~d~~~AwP~a~~~vm~~ega~~i~~~~e~~~~e~~~~~~~e~~~~~~~p~~aa~~~~iD~v 497 (531)
T 3n6r_B 420 RKAYGGAY--VVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEV 497 (531)
T ss_dssp EEEEHHHH--HHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSSSHHHHHHTSSSEE
T ss_pred CCCCHHHH--HHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEE
T ss_conf 98641988--9742666788879997866587369999999874343479678999999999985498999865886710
Q ss_pred ECHHHHHHHHHHHHHHHHCCC
Q ss_conf 358999999999999972378
Q gi|254780820|r 263 VHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 263 v~r~~l~~~i~~ll~il~~~~ 283 (284)
|++.|.|+.|...|..|..|.
T Consensus 498 IdP~dTR~~l~~~l~~l~~~~ 518 (531)
T 3n6r_B 498 IQPRSTRKRVARAFASLRNKS 518 (531)
T ss_dssp CCGGGHHHHHHHHHHTTTTCC
T ss_pred ECHHHHHHHHHHHHHHHHCCC
T ss_conf 786999999999999864687
No 17
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.70 E-value=1.9e-15 Score=133.85 Aligned_cols=200 Identities=20% Similarity=0.231 Sum_probs=155.1
Q ss_pred CCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHH
Q ss_conf 89624379999998455654201334568702018676420356677666421667716999878704149999983303
Q gi|254780820|r 52 DFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSF 131 (284)
Q Consensus 52 ~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F 131 (284)
+.......|+-|..++|.++|.|+... | ..++|||.++|+|++|.+.+.|..+
T Consensus 285 ~~~~~yd~r~vi~~v~D~~~f~E~~~~--------------~-------------g~~~vtg~aRl~G~~VGviAn~p~~ 337 (523)
T 1on3_A 285 DGKKGYDVRDVIAKIVDWGDYLEVKAG--------------Y-------------ATNLVTAFARVNGRSVGIVANQPSV 337 (523)
T ss_dssp STTCCCCTHHHHHHHSGGGCEEEESTT--------------S-------------STTEEEEEEEETTEEEEEEEECTTS
T ss_pred HCCCCCCHHHHEEECCCCCCEEEEECC--------------C-------------CCCHHHHHHHHCCCEEEEEECCCCC
T ss_conf 046785636720204556753114645--------------3-------------6618878776459558999247632
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 18535778999999999999862896899976888776---521246777788999999998629988998567642011
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM---QEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM---qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
.+|.+.....+|..|.++.|-..++|||.+.+.-|.-. +|-.--+-..++.. ..+..+..|.|+|++...+||-
T Consensus 338 ~~G~l~~~~a~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Gi~~~gA~~~---~A~a~a~vP~isvi~~k~~G~g 414 (523)
T 1on3_A 338 MSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKML---YAYSEATVPKITVVLRKAYGGS 414 (523)
T ss_dssp GGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHH---HHHHHCCSCEEEEEEEEEEHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HHHHCCCCCEEEEEECCCCCHH
T ss_conf 3688870678999999998874287789994278767778999976999999999---9853679987999857744502
Q ss_pred EEEECC-----CCCEEEEECCCEEECCCHHHHHHHH-C-----CCCC------------CCCHHHHHHHHCCCCCEEECH
Q ss_conf 112014-----6852555314211023278878763-6-----7788------------720215999968983537358
Q gi|254780820|r 209 TASYAM-----LGDIHLAEPGAEIGFAGRRVIEQTV-R-----EKLP------------DGFQRSEYLVEHGMIDRIVHR 265 (284)
Q Consensus 209 ~AS~a~-----lgDiiiaep~a~igFaG~rVi~~t~-~-----~~lp------------~~fqtae~l~~~G~iD~iv~r 265 (284)
.+|| -.|+++|-|.|.++.-||.---.++ + .+-| +.+.++....++|.||.||++
T Consensus 415 --~~am~~~~~~~d~~~AwP~a~~~vm~pegaa~i~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VIdP 492 (523)
T 1on3_A 415 --YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP 492 (523)
T ss_dssp --HHTTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG
T ss_pred --HHCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECH
T ss_conf --312467778878799867555984599999998741210176798999999999999875799999866788842887
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999972378
Q gi|254780820|r 266 HDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 266 ~~l~~~i~~ll~il~~~~ 283 (284)
.|.|+.|...|.++..|.
T Consensus 493 ~~TR~~l~~~l~~~~~k~ 510 (523)
T 1on3_A 493 ADTRRKIASALEMYATKR 510 (523)
T ss_dssp GGHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999975177
No 18
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=99.70 E-value=2e-15 Score=133.68 Aligned_cols=202 Identities=16% Similarity=0.280 Sum_probs=155.8
Q ss_pred CCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECH
Q ss_conf 98962437999999845565420133456870201867642035667766642166771699987870414999998330
Q gi|254780820|r 51 SDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFS 130 (284)
Q Consensus 51 C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~ 130 (284)
.+..-....|+-|+.++|.++|.|+... | ..++|||.++|+|+||.+++.+..
T Consensus 288 ~~~~~~yD~r~vi~~l~D~~~f~E~~~~--------------~-------------g~~vvtg~arl~G~pVgviAn~~~ 340 (527)
T 1vrg_A 288 DNPNKGYDVRDVIKRVVDHGEFFEVQPY--------------F-------------AKNIVIGFARIQGKTVGIVANQPS 340 (527)
T ss_dssp SSTTSCCCTHHHHHHHSGGGCCEEESTT--------------S-------------STTEEEEEEEETTEEEEEEEECTT
T ss_pred CCCCCCCCHHHHHHHHCCCCCHHHHHCC--------------C-------------CCCEEEEEEEECCEEEEEEECCCC
T ss_conf 9989887899999984688512000004--------------6-------------885799999999888889833663
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 318535778999999999999862896899976888776-----521246777788999999998629988998567642
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTT 205 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~ 205 (284)
+++|.+.....+|..|.++.|-+.++|||.|.+.-|+-. +.|++. ..++. +..+.++.+|.|+|+++..+
T Consensus 341 ~~~G~~~~~~a~Kaarfi~lcd~~~lPlv~lvDtpGf~~G~~aE~~G~~~--~gA~l---~~a~a~~~vP~i~vi~gk~~ 415 (527)
T 1vrg_A 341 VLAGVLDIDSSDKAARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIR--HGAKL---LYAYSEATVPKITVILRKAY 415 (527)
T ss_dssp SGGGCBCHHHHHHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHH--HHHHH---HHHHHHCCSCEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH--HHHHH---HHHHHHCCCCEEEEEECCCC
T ss_conf 33788750478999999998514598669995068868878999974999--99999---99998389987999868866
Q ss_pred CEEEEEEC---CCCCEEEEECCCEEECCCHHHHHHHH-C-----CCCCCC------------CHHHHHHHHCCCCCEEEC
Q ss_conf 01111201---46852555314211023278878763-6-----778872------------021599996898353735
Q gi|254780820|r 206 GGVTASYA---MLGDIHLAEPGAEIGFAGRRVIEQTV-R-----EKLPDG------------FQRSEYLVEHGMIDRIVH 264 (284)
Q Consensus 206 GGv~AS~a---~lgDiiiaep~a~igFaG~rVi~~t~-~-----~~lp~~------------fqtae~l~~~G~iD~iv~ 264 (284)
||.+...+ +-.|+++|-|.|.++.-+|.-...++ + .+-|+. +-.+....+.|+||.||+
T Consensus 416 Ggg~~am~~~~~~~d~~~Awp~a~~~vm~pegaa~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~iD~VId 495 (527)
T 1vrg_A 416 GGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVID 495 (527)
T ss_dssp HHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECC
T ss_pred CHHHHHCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC
T ss_conf 58776106777788889997877186169999999884312115579899999999999998579999987578881088
Q ss_pred HHHHHHHHHHHHHHHHCCCC
Q ss_conf 89999999999999723789
Q gi|254780820|r 265 RHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 265 r~~l~~~i~~ll~il~~~~~ 284 (284)
+.+.|+.|...|+++..|.+
T Consensus 496 P~~tR~~l~~~l~~~~~k~~ 515 (527)
T 1vrg_A 496 PRETRKYIMRALEVCETKVE 515 (527)
T ss_dssp GGGHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999999999760642
No 19
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=99.65 E-value=4.5e-14 Score=123.67 Aligned_cols=200 Identities=15% Similarity=0.227 Sum_probs=150.9
Q ss_pred CCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEE---
Q ss_conf 98962437999999845565420133456870201867642035667766642166771699987870414999998---
Q gi|254780820|r 51 SDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVH--- 127 (284)
Q Consensus 51 C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~--- 127 (284)
.+..-+...|+-|+.++|.++|.|+... | ..++|||.++|+|++|.+.+.
T Consensus 318 ~~~~~~yD~r~vi~~i~D~~sf~E~~~~--------------~-------------g~~vvtG~aRl~G~pVGviAn~~~ 370 (588)
T 3gf3_A 318 MNQKRPYDIYEVIARLFDNSEFSEYKKG--------------Y-------------GPEMVTGLAKVNGLLVGVIANVQG 370 (588)
T ss_dssp SSTTCCCCHHHHHHHHSGGGBCEESSTT--------------S-------------STTEEEEEEEETTEEEEEEEECCS
T ss_pred CCCCCCCCHHHHHHHCCCCCCEEEECCC--------------C-------------CCCCEEEEEEECCCEEEEEECCCC
T ss_conf 0467777499999864555532320355--------------5-------------776326677648947999951455
Q ss_pred ----------ECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf ----------330318535778999999999999862896899976888776-----52124677778899999999862
Q gi|254780820|r 128 ----------EFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAINMLKDA 192 (284)
Q Consensus 128 ----------df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~~l~~~ 192 (284)
+..++||.+.....+|.+|.++.+-..++|||.|.+.-|.-. +.|++ -..+|...|+ .++
T Consensus 371 ~~~~~p~~~~~~~~~~G~l~~~aa~Kaarfi~lcd~f~lPlv~lvD~pGf~~G~~~E~~Gii--~~gA~~~~A~---a~a 445 (588)
T 3gf3_A 371 LLMNYPEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELL--GLGQSLIYSI---ENS 445 (588)
T ss_dssp EEETCCTTSSSCEEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHH--HHHHHHHHHH---HHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH--HHHHHHHHHH---HCC
T ss_conf 34456543356200378667778999999998515479876999357887787688871499--9999999998---717
Q ss_pred CCCEEEEECCCCCCEEEEEECCC-----CCEEEEE--CCCEEECCCHHHHHHHH-C------CCCCCCC-----------
Q ss_conf 99889985676420111120146-----8525553--14211023278878763-6------7788720-----------
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAML-----GDIHLAE--PGAEIGFAGRRVIEQTV-R------EKLPDGF----------- 247 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~l-----gDiiiae--p~a~igFaG~rVi~~t~-~------~~lp~~f----------- 247 (284)
.+|.|+|++...+||. .++|. .|++++- |.|.||.-||.-.-+++ + ++-.++.
T Consensus 446 ~vP~isvi~rka~Ggg--~~am~~~~~~~d~~~a~~~p~a~~~vm~~ega~~i~~~~e~~~a~~~~~~~~~~~~~~~~~~ 523 (588)
T 3gf3_A 446 KLPSLEITIRKASAAA--HYVLGGPQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMI 523 (588)
T ss_dssp CSCEEEEESSEEETTH--HHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHH--HHHHCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 9997999978753145--66524755688646876788762842589999999999999753167714458999999999
Q ss_pred ------HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf ------2159999689835373589999999999999723789
Q gi|254780820|r 248 ------QRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 248 ------qtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~ 284 (284)
.++.+.-++|.||.||++.|.|..|...|+++..|.|
T Consensus 524 ~~~~~~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~~~~~~~~ 566 (588)
T 3gf3_A 524 QMYTDKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTEAAYQNPQ 566 (588)
T ss_dssp HHHHHTTSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999846999998657878127839999999999999985876
No 20
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=99.64 E-value=1.7e-14 Score=126.80 Aligned_cols=203 Identities=16% Similarity=0.246 Sum_probs=153.2
Q ss_pred CCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
Q ss_conf 38899896243799999984556542013345687020186764203566776664216677169998787041499999
Q gi|254780820|r 47 VISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVV 126 (284)
Q Consensus 47 VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~ 126 (284)
+.|. +.--....|+-|..++|+++|.|+-.. | ..++|||.++|+|+||.+++
T Consensus 312 ~vp~-d~~~~yd~r~vi~~i~D~~~f~E~~~~--------------~-------------g~~iVtG~aRl~G~pVGVIA 363 (587)
T 1pix_A 312 MVPL-NDKRAYDIYNVIARLFDNSELHEYKKG--------------Y-------------GPEMVTGLAKVNGLLVGVVA 363 (587)
T ss_dssp HSCS-STTSCCCHHHHHHTTSGGGBCEESSTT--------------S-------------STTEEEEEEEETTEEEEEEE
T ss_pred CCCC-CCCCCCCCEECCCCCCCCHHHHCCCCC--------------C-------------CCCEEEEEEEECCCEEEEEE
T ss_conf 1444-555676630000002332011013566--------------7-------------88537899986796799995
Q ss_pred EECHHH--------------CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-----CCCHHHHHHHHHHHHHHH
Q ss_conf 833031--------------8535778999999999999862896899976888776-----521246777788999999
Q gi|254780820|r 127 HEFSFI--------------GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARM-----QEGILSLMQLPRTTIAIN 187 (284)
Q Consensus 127 ~df~F~--------------GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRM-----qEG~~sL~qMakt~~a~~ 187 (284)
.+..++ ||++.+...+|.+|.++.+-..++|||.|.+.-|.-. +.|++- .-+|. +.
T Consensus 364 n~~~~~~~~~~~~a~~~~~~gG~l~~~sa~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Giir--~gA~l---~~ 438 (587)
T 1pix_A 364 NVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLG--LGQSL---IY 438 (587)
T ss_dssp ECCSEETTCCTTSCTTCCEETTEECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHH--HHHHH---HH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH--HHHHH---HH
T ss_conf 25543445543222333356896687899999999998764299668971588878876999988999--99999---98
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCC-----CE--EEEECCCEEECCCHHHHHHHH-----------CCCCC-----
Q ss_conf 99862998899856764201111201468-----52--555314211023278878763-----------67788-----
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLG-----DI--HLAEPGAEIGFAGRRVIEQTV-----------REKLP----- 244 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lg-----Di--iiaep~a~igFaG~rVi~~t~-----------~~~lp----- 244 (284)
.+.++.+|.|+|++...+|| |.++|.+ |+ ..+-|.+.|+.-||.-...+. ++++.
T Consensus 439 A~a~a~vP~itvi~rkayGg--a~~am~~~~~~~~~~~~~a~p~a~i~vm~~e~av~i~~~~~~~~~~~~~~~~~~~~~~ 516 (587)
T 1pix_A 439 SIQTSHIPQFEITLRKGTAA--AHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDK 516 (587)
T ss_dssp HHHTCCCCEEEEECSEEETT--HHHHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCHH--HHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 88737999799997985316--7787347656886137721887626157999999999888765221445244589999
Q ss_pred -----CCC---HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCC
Q ss_conf -----720---2159999689835373589999999999999723789
Q gi|254780820|r 245 -----DGF---QRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSVQ 284 (284)
Q Consensus 245 -----~~f---qtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~~ 284 (284)
+.| .++...-++|.||.|+++.|.|..|...|..+.+|.+
T Consensus 517 ~~~~~~~~~~~~~p~~aa~~g~vD~iIdP~~TR~~l~~~l~~~~~~~~ 564 (587)
T 1pix_A 517 MNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE 564 (587)
T ss_dssp HHHHHHHHHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999998736999999728868128839999999999999985866
No 21
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.52 E-value=7.4e-12 Score=107.25 Aligned_cols=205 Identities=11% Similarity=0.106 Sum_probs=155.3
Q ss_pred CCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEEC-
Q ss_conf 9896243799999984556542013345687020186764203566776664216677169998787041499999833-
Q gi|254780820|r 51 SDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEF- 129 (284)
Q Consensus 51 C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df- 129 (284)
+-|.-|-.+.++|+.+||+ |.|+.-+-. | +-+.|+++|.|+++|++|++..++.
T Consensus 73 ARhp~RP~~~DyI~~ifdd--f~eLhGDR~------~-----------------~dD~aii~g~a~~~g~~v~vig~~kg 127 (327)
T 2f9i_A 73 ARLQERPTTLDYIPYIFDS--FMELHGDRN------F-----------------RDDPAMIGGIGFLNGRAVTVIGQQRG 127 (327)
T ss_dssp HTBTTSCCHHHHHHHHCEE--EEECCCCSS------S-----------------CCCTTEEEEEEEETTEEEEEEEECCC
T ss_pred HHCCCCCCHHHHHHHHCCC--CEEEECCCC------C-----------------CCCHHHHHHHHHCCCEEEEEEEEECC
T ss_conf 7478999779999873466--478505655------6-----------------76622445435407805899975057
Q ss_pred -------HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf -------0318535778999999999999862896899976888776521246777788999999998629988998567
Q gi|254780820|r 130 -------SFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 130 -------~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
...+|...+..-+|-.|++.+|-+-++|+|.|.++-||---.+.-.--|-..+...+..+....+|.|||+++
T Consensus 128 ~~~~e~~~~nfGm~~pegyrKA~R~m~~Aekf~~Piit~IDTpGA~pg~~aEe~Gqa~aIA~~l~~~~~l~vP~isvIiG 207 (327)
T 2f9i_A 128 KDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIG 207 (327)
T ss_dssp SSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEE
T ss_pred CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 66541103228999979999999999999974997799842798678877441489999999999985899997999975
Q ss_pred C-CCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCC-------CHHHHHHHHCCCCCEEEC-H--------
Q ss_conf 6-4201111201468525553142110232788787636778872-------021599996898353735-8--------
Q gi|254780820|r 203 P-TTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDG-------FQRSEYLVEHGMIDRIVH-R-------- 265 (284)
Q Consensus 203 p-t~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~-------fqtae~l~~~G~iD~iv~-r-------- 265 (284)
- +.||..| -+.+|.+++-+.|.....+|.=-...+-.+--.- --||.-|++.|.||.||+ +
T Consensus 208 EGgSGGAla--l~~ad~v~mle~a~ysVisPEg~asIlwkd~~~a~eAAe~lklTA~dLl~lGiID~II~EP~GgAh~d~ 285 (327)
T 2f9i_A 208 EGGSGGALG--IGIANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDI 285 (327)
T ss_dssp EEBHHHHHT--TCCCSEEEEETTCBCBSSCHHHHHHHHSSCGGGHHHHHHHHTCBHHHHHHTTSSSEEECCCTTCGGGCH
T ss_pred CCCCCCEEE--EECCCEEEEECCEEEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCCH
T ss_conf 755531134--533784887457189995667777885458125899998620799999977997287169998553599
Q ss_pred ----HHHHHHHHHHHHHHHCC
Q ss_conf ----99999999999997237
Q gi|254780820|r 266 ----HDIPEVVSSLCKILTKS 282 (284)
Q Consensus 266 ----~~l~~~i~~ll~il~~~ 282 (284)
+.+|+.|.+-|.-|.+.
T Consensus 286 ~~~~~~lk~~i~~~L~~L~~~ 306 (327)
T 2f9i_A 286 EQQALAIKSAFVAQLDSLESL 306 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999779
No 22
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=99.48 E-value=4.7e-12 Score=108.69 Aligned_cols=167 Identities=16% Similarity=0.193 Sum_probs=125.3
Q ss_pred CCCEEEEEEEEECEEEEEEEEECHHH---------------------CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 77169998787041499999833031---------------------853577899999999999986289689997688
Q gi|254780820|r 107 IDSIVSAVGNVRDFKLVAVVHEFSFI---------------------GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASG 165 (284)
Q Consensus 107 ~davv~G~G~I~G~~vvv~~~df~F~---------------------GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SG 165 (284)
..++|||.++|+|+||.+++.+.++. ||.+.+....|.+|++..|-+.++|||+|...-
T Consensus 388 a~~vVtG~ARLgG~pVGVIAne~~~~~~~~padpa~~~s~~~~~~~~GGv~~pdsa~KaArfI~lcd~~~lPLv~LvD~p 467 (760)
T 3ff6_A 388 AQTVVTGRARLGGIPVGVIAVETRTVEVAVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLMIFANWR 467 (760)
T ss_dssp STTEEEEEEEETTEEEEEEEECCSCEEEEECCCTTCSSCCCEEEEECTTCBCHHHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 47658899999998899997567534455677855531256666531782557999999999998454699859995488
Q ss_pred CCC-----CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC--CEEEEEECCCC-------CEEEEECCCEEECCC
Q ss_conf 877-----6521246777788999999998629988998567642--01111201468-------525553142110232
Q gi|254780820|r 166 GAR-----MQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTT--GGVTASYAMLG-------DIHLAEPGAEIGFAG 231 (284)
Q Consensus 166 GaR-----MqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~--GGv~AS~a~lg-------Diiiaep~a~igFaG 231 (284)
|.- |+.|++. ..++. +..+.++..|.|+|+..-.. || +|.+++ |..+|-|.|.+|.-|
T Consensus 468 GF~~G~~~E~~Gilk--~GA~i---v~Ala~~~vP~itvI~~~g~~~GG---a~vv~~~~~~~~~~~vyAwp~A~~gVl~ 539 (760)
T 3ff6_A 468 GFSGGMKDMYDQVLK--FGAYI---VDGLRQYKQPILIYIPPYAELRGG---SWVVIDATINPLCIEMYADKESRGGVLE 539 (760)
T ss_dssp CBCCSHHHHHTTHHH--HHHHH---HHHHHTCCSCEEEEECTTCEEEHH---HHHTTCGGGSTTTEEEEEETTCEEESSC
T ss_pred CCCCCHHHHHHHHHH--HHHHH---HHHHHCCCCCEEEEEECCCEECCC---CEEECCCCCCCCCCEEEECCCCEEECCC
T ss_conf 766668999848999--99999---999970899879999587353364---4464166557766558886620063478
Q ss_pred HHHHHHHH-CC-------------------C-----CCC-----------------------------C-CHHHHHHHHC
Q ss_conf 78878763-67-------------------7-----887-----------------------------2-0215999968
Q gi|254780820|r 232 RRVIEQTV-RE-------------------K-----LPD-----------------------------G-FQRSEYLVEH 256 (284)
Q Consensus 232 ~rVi~~t~-~~-------------------~-----lp~-----------------------------~-fqtae~l~~~ 256 (284)
|.-..+.. +. + .++ + +-++....++
T Consensus 540 pegav~I~fr~~~~~~~~~r~d~~~~~l~~~l~~~~~~~~~~~~~~~~~~~re~~l~~~y~~va~~fadlhd~~~raa~~ 619 (760)
T 3ff6_A 540 PEGTVEIKFRKKDLIKSMRRIDPAYKKLMEQLGEPDLSDKDRKDLEGRLKAREDLLLPIYHQVAVQFADFHDTPGRMLEK 619 (760)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHCGGGGHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
T ss_conf 99987867501544433310005677888874144433567888999999999887788899999999851689999965
Q ss_pred CCCCEEECHHHHHHHHHHHHHHHHC
Q ss_conf 9835373589999999999999723
Q gi|254780820|r 257 GMIDRIVHRHDIPEVVSSLCKILTK 281 (284)
Q Consensus 257 G~iD~iv~r~~l~~~i~~ll~il~~ 281 (284)
|.||.||+..+.|..|..-|+-++.
T Consensus 620 G~Id~vI~p~~tR~~l~~~Lrr~l~ 644 (760)
T 3ff6_A 620 GVISDILEWKTARTFLYWRLRRLLL 644 (760)
T ss_dssp TSSSEEECGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8177305859999999999999885
No 23
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha chain; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.47 E-value=1.2e-11 Score=105.84 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=152.2
Q ss_pred CCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECH
Q ss_conf 98962437999999845565420133456870201867642035667766642166771699987870414999998330
Q gi|254780820|r 51 SDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFS 130 (284)
Q Consensus 51 C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~ 130 (284)
.-|..|-.+.++|+.+||+ |.|+..+-.. +-+.|++.|.|+++|++|++..++..
T Consensus 87 ARhP~RP~~~DyI~~lf~d--f~eL~GDr~~-----------------------~dD~aii~G~ar~~g~~v~vig~~kg 141 (339)
T 2f9y_A 87 ARHPQRPYTLDYVRLAFDE--FDELAGDRAY-----------------------ADDKAIVGGIARLDGRPVMIIGHQKG 141 (339)
T ss_dssp HTCTTCCCHHHHHHHHCEE--EEECCCCSSS-----------------------CCCTTEEEEEEEETTEEEEEEEECCC
T ss_pred HHCCCCCCHHHHHHHCCCC--EEEECCCCCC-----------------------CCCHHHHHHEEEEECCEEEEEEECCC
T ss_conf 7189996579999754674--6993157655-----------------------65442431203650553799862267
Q ss_pred H--------HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH--HHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 3--------18535778999999999999862896899976888776521246--7777889999999986299889985
Q gi|254780820|r 131 F--------IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILS--LMQLPRTTIAINMLKDAGLPYIVVL 200 (284)
Q Consensus 131 F--------~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~s--L~qMakt~~a~~~l~~~~lP~I~vl 200 (284)
- ..|.+.+..-+|..|.+..|-+-++|+|.|.++-||-- |+-+ --|--.+..-+..+.+..+|.|+|+
T Consensus 142 ~~~~~~~~~nfG~~~pegyrKA~R~m~laekf~iPIit~vDTpGa~p--G~~aEerG~~~aiA~~l~~~~~l~VP~IsvV 219 (339)
T 2f9y_A 142 RETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYP--GVGAEERGQSEAIARNLREMSRLGVPVVCTV 219 (339)
T ss_dssp SSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCC--SHHHHHTTHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCHHHHCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 76232100268888879999999999999973996699852798688--7000223799999999999976999879999
Q ss_pred CCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCC-------HHHHHHHHCCCCCEEEC-H-------
Q ss_conf 67642011112014685255531421102327887876367788720-------21599996898353735-8-------
Q gi|254780820|r 201 TNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGF-------QRSEYLVEHGMIDRIVH-R------- 265 (284)
Q Consensus 201 ~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~f-------qtae~l~~~G~iD~iv~-r------- 265 (284)
++-.+||-+... ..+|.+++-+.|.+...+|.=-...+-.+-...- .||.-|++.|.||.||+ +
T Consensus 220 igeg~sGGAlam-~~~D~vlmle~A~ySVisPEg~AsILwrd~~~a~~AAe~lkita~dl~~~giID~II~EP~ggAhrd 298 (339)
T 2f9y_A 220 IGEGGSGGALAI-GVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIRPRLKELKLIDSIIPEPLGGAHRN 298 (339)
T ss_dssp EEEEEHHHHHTT-CCCSEEEECTTCEEESSCHHHHHHHHSSCSTTHHHHHHHHTCSHHHHHTTTSCSCCCCCSTTCGGGC
T ss_pred ECCCCCCCCEEE-CCCCHHHCCHHHHHEEECHHHCHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 776445432111-3521431230225036243321000047712459999998737999997799718705899856469
Q ss_pred -----HHHHHHHHHHHHHHHC
Q ss_conf -----9999999999999723
Q gi|254780820|r 266 -----HDIPEVVSSLCKILTK 281 (284)
Q Consensus 266 -----~~l~~~i~~ll~il~~ 281 (284)
..+|..|.+-|+-|.+
T Consensus 299 ~~~~~~~l~~~i~~~L~~L~~ 319 (339)
T 2f9y_A 299 PEAMAASLKAQLLADLADLDV 319 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999967
No 24
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.36 E-value=9.1e-11 Score=99.20 Aligned_cols=191 Identities=16% Similarity=0.176 Sum_probs=130.4
Q ss_pred ECCHHHHHH----------HHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEE
Q ss_conf 437999999----------8455654201334568702018676420356677666421667716999878704149999
Q gi|254780820|r 56 KIPAKERLK----------FLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAV 125 (284)
Q Consensus 56 rl~areRi~----------~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~ 125 (284)
...+|+-|+ -++|.++|.|+-. +...++|||.++|+|+||.+.
T Consensus 365 pyD~r~vI~~~~~~~~~~~~i~D~~sF~E~~~---------------------------~~a~~vVtG~ARLgG~pVGVI 417 (758)
T 3k8x_A 365 TYDVRWMIEGRETESGFEYGLFDKGSFFETLS---------------------------GWAKGVVVGRARLGGIPLGVI 417 (758)
T ss_dssp CCCHHHHHHCEEETTEEECCSSCTTCCEEEST---------------------------TSCTTEEEEEEEETTEEEEEE
T ss_pred CCCCEEEECCCCCCCCCCEEEEECCCEEECCC---------------------------CCCCCEEEEEEEECCEEEEEE
T ss_conf 98640564056776544405772664242246---------------------------665754899999999789999
Q ss_pred EEECHHHCCC---------------------CCHHHHHHHHHHH-HHHHHHCCCEEEEECCCCCC-----CCCCHHHHHH
Q ss_conf 9833031853---------------------5778999999999-99986289689997688877-----6521246777
Q gi|254780820|r 126 VHEFSFIGGS---------------------IGIAAGEAIVKSC-ERAIAEKCPLVMFTASGGAR-----MQEGILSLMQ 178 (284)
Q Consensus 126 ~~df~F~GGS---------------------mG~~~geki~~a~-e~A~~~~~PlI~~~~SGGaR-----MqEG~~sL~q 178 (284)
+.|.++++|. +-+-.+.|.++.+ +.+-..++|||.|.+.-|.- |+.|++- .
T Consensus 418 An~~~~~~g~~~aDpa~~~s~~~~~~~aGgv~~p~sa~K~ArfI~~lcd~~~LPLv~LvDtpGF~~G~~aE~~Giik--~ 495 (758)
T 3k8x_A 418 GVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLK--Y 495 (758)
T ss_dssp EECCSCEEEEECCCTTSTTCCCEEEEECTTEECHHHHHHHHHHHHHHHHTSCCCEEECCCCCEECCSHHHHHTTHHH--H
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH--H
T ss_conf 75665233545687445420334443057856706899999999999861288669997188877678999833999--9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEE--CCCCCCEEEEEE--CCCCC-E-EEEECCCEEECCCHHHHHHHH-C-----------
Q ss_conf 7889999999986299889985--676420111120--14685-2-555314211023278878763-6-----------
Q gi|254780820|r 179 LPRTTIAINMLKDAGLPYIVVL--TNPTTGGVTASY--AMLGD-I-HLAEPGAEIGFAGRRVIEQTV-R----------- 240 (284)
Q Consensus 179 Makt~~a~~~l~~~~lP~I~vl--~~pt~GGv~AS~--a~lgD-i-iiaep~a~igFaG~rVi~~t~-~----------- 240 (284)
.++.. ..+.++.+|.|+|+ +.-..||.++.. ...++ + .+|-|.|.+|.-||.-.-... +
T Consensus 496 GA~iv---~Ala~a~vP~itvI~~~g~~~GGayvv~~~~~~~~~~~vyAwp~A~~gVm~pEgav~I~fR~e~~~~~~~r~ 572 (758)
T 3k8x_A 496 GSFIV---DALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRL 572 (758)
T ss_dssp HHHHH---HHHHTCCSCEEEEECTTCEEETHHHHTTCGGGSTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHH---HHHHCCCCCEEEEEECCCEECCHHHHHCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99999---999758998799994774451212542376547765537786720388178999989781641100352216
Q ss_pred ----CCCCCC-----------------------------------C---H-HHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf ----778872-----------------------------------0---2-15999968983537358999999999999
Q gi|254780820|r 241 ----EKLPDG-----------------------------------F---Q-RSEYLVEHGMIDRIVHRHDIPEVVSSLCK 277 (284)
Q Consensus 241 ----~~lp~~-----------------------------------f---q-tae~l~~~G~iD~iv~r~~l~~~i~~ll~ 277 (284)
.+|-+. | | |+....++|.||.||+.++.|.++...|+
T Consensus 573 d~~~~el~~~l~~~~~aae~~~~~~~~~~~re~~l~~~y~~va~~fa~lhd~~~rm~a~G~I~~vi~~~~tR~~~~~~l~ 652 (758)
T 3k8x_A 573 DDKYRELRSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLR 652 (758)
T ss_dssp CSCCCCC----------------------------HHHHHHHHHHHHHTTSBHHHHHHHTCSSEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999986394326566888999999999987788999999999830858778752837733287887999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780820|r 278 I 278 (284)
Q Consensus 278 i 278 (284)
-
T Consensus 653 r 653 (758)
T 3k8x_A 653 R 653 (758)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 25
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Bordetella parapertussis}
Probab=98.11 E-value=0.00033 Score=50.67 Aligned_cols=158 Identities=11% Similarity=0.147 Sum_probs=105.4
Q ss_pred EEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC-----CCCCCCCCH-----HHHHHHHHHHHHHHHHHHC
Q ss_conf 999983303185357789999999999998628968999768-----887765212-----4677778899999999862
Q gi|254780820|r 123 VAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTAS-----GGARMQEGI-----LSLMQLPRTTIAINMLKDA 192 (284)
Q Consensus 123 vv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~S-----GGaRMqEG~-----~sL~qMakt~~a~~~l~~~ 192 (284)
...-+|--=-.-+++...-+.+..+++.+.+..+-+|++..+ .|+.+.|-. .....+.+....+.++.+.
T Consensus 18 ~tiTlnrP~~~Nal~~~m~~el~~al~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 97 (254)
T 3isa_A 18 WTFTLSRPEKRNALSAELVEALIDGVDAAHREQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGS 97 (254)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHTTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99995575657899999999999999997579954999978899711698704310110012456678999999999858
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH--------HHHHHCCC------C-CCCCHHHHHHHHCC
Q ss_conf 998899856764201111201468525553142110232788--------78763677------8-87202159999689
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV--------IEQTVREK------L-PDGFQRSEYLVEHG 257 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV--------i~~t~~~~------l-p~~fqtae~l~~~G 257 (284)
..|+|+.+.+++.||= +.++...|+.|+.+++.+++..-++ ..+.+|.. + .+- =+++..++.|
T Consensus 98 ~kPvIaav~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~pg~~~l~r~iG~~~A~~llltg~~-~~a~eA~~~G 175 (254)
T 3isa_A 98 PSLTLALAHGRNFGAG-VDLFAACKWRYCTPEAGFRMPGLKFGLVLGTRRFRDIVGADQALSILGSARA-FDADEARRIG 175 (254)
T ss_dssp SSEEEEEECSEEETHH-HHHHHHSSEEEECTTCEEECCGGGGTCCCSHHHHHHHHCHHHHHHHHTTTCE-EEHHHHHHTT
T ss_pred CCCEEEECCCCEEECC-CCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHCCC-CCHHHHHHCC
T ss_conf 9989996797187647-6235557768976543555751025005776543444169999999860677-6778999769
Q ss_pred CCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 8353735899999999999997237
Q gi|254780820|r 258 MIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 258 ~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+||.||+..++.+.+..+.+-+.++
T Consensus 176 Lv~~vv~~~~l~~~~~~~a~~l~~~ 200 (254)
T 3isa_A 176 FVRDCAAQAQWPALIDAAAEAATAL 200 (254)
T ss_dssp SSSEECCGGGHHHHHHHHHHHHTTS
T ss_pred CHHEECCHHHHHHHHHHHHHHHHCC
T ss_conf 7315628879999999999999839
No 26
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.04 E-value=0.00028 Score=51.22 Aligned_cols=161 Identities=9% Similarity=0.161 Sum_probs=100.3
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-------CCCC---CHHHHHHHH-HHHHHHHHHH
Q ss_conf 9999983303185357789999999999998628968999768887-------7652---124677778-8999999998
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGA-------RMQE---GILSLMQLP-RTTIAINMLK 190 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGa-------RMqE---G~~sL~qMa-kt~~a~~~l~ 190 (284)
|++..+|--=-.-+++...-..+..+++.+.+...-+|++..++|- .+.| +...-..+. .....+..+.
T Consensus 14 i~~Itlnrp~~~Nal~~~~~~~L~~al~~~~~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (261)
T 1ef8_A 14 VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQ 93 (261)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999738777799999999999999999737998799997148997476687711343467430246699999999999
Q ss_pred HCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-------HHHHHCCCCC----------CCCHHHHHH
Q ss_conf 62998899856764201111201468525553142110232788-------7876367788----------720215999
Q gi|254780820|r 191 DAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-------IEQTVREKLP----------DGFQRSEYL 253 (284)
Q Consensus 191 ~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-------i~~t~~~~lp----------~~fqtae~l 253 (284)
+...|+|+.+.++|.||- ...++..|++|+.++|.+++.-.++ .-..+...++ -.--+|+-.
T Consensus 94 ~~~kPvIaav~G~a~GgG-~~lala~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~~~~G~~~a~~~~l~g~~~~a~eA 172 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGA-FEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRA 172 (261)
T ss_dssp HCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHH
T ss_pred HCCCCEEEEECCEEEEEE-EHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEECHHHH
T ss_conf 779988999774886401-0244534440000001235840001235564203244677173678999980984459999
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 968983537358999999999999972378
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
++.|++|.|++..++.+....+.+-+.+++
T Consensus 173 ~~~Glv~~v~~~~~~~~~a~~~a~~l~~~~ 202 (261)
T 1ef8_A 173 LAVGILNHVVEVEELEDFTLQMAHHISEKA 202 (261)
T ss_dssp HHTTSCSEEECHHHHHHHHHHHHHHHTTSC
T ss_pred HHCCCCCEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 975992275680457999999999998379
No 27
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, alternative splicing, fatty acid metabolism, enoyl coenzyme A hydratase; 2.3A {Homo sapiens}
Probab=98.03 E-value=0.00038 Score=50.22 Aligned_cols=161 Identities=11% Similarity=0.177 Sum_probs=104.7
Q ss_pred EEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCC-----CCCCCCHH-----HHH-HHHH
Q ss_conf 87870414999998330318535778999999999999862-896899976888-----77652124-----677-7788
Q gi|254780820|r 114 VGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGG-----ARMQEGIL-----SLM-QLPR 181 (284)
Q Consensus 114 ~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGG-----aRMqEG~~-----sL~-qMak 181 (284)
.-++|| |+...+|--=-.-+++...-+-+..+++.+.++ .+-+|++..+|. +.+.+-.. ... .+..
T Consensus 37 ~~~~DG--Va~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 114 (287)
T 2vx2_A 37 ARQLDG--IRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQT 114 (287)
T ss_dssp EEEETT--EEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHH
T ss_pred EEEECC--EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
T ss_conf 773088--899997488877999999999999999998508996699997889986477541222000012466777767
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-------------------HHHH--HC
Q ss_conf 99999999862998899856764201111201468525553142110232788-------------------7876--36
Q gi|254780820|r 182 TTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-------------------IEQT--VR 240 (284)
Q Consensus 182 t~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-------------------i~~t--~~ 240 (284)
....+.++.....|+|+.+.++|.||- ..+++..|+.|+.+++.+++..-++ ..+- ++
T Consensus 115 ~~~~~~~l~~~~kPvIAav~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~lg~~~a~~llltg 193 (287)
T 2vx2_A 115 CSKVMMHIRNHPVPVIAMVNGLATAAG-CQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALEMLFTG 193 (287)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHHHHTTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCEEEEECCEEEHHH-HHHHHHCCCCEECCCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999997289877999688661667-8887605645377886898711152707872278899999999999999839
Q ss_pred CCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 778872021599996898353735899999999999997237
Q gi|254780820|r 241 EKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 241 ~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+.+ +|+..++.|+||.||+..++.+....+..-+.++
T Consensus 194 ~~~-----~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l~~~ 230 (287)
T 2vx2_A 194 EPI-----SAQEALLHGLLSKVVPEAELQEETMRIARKIASL 230 (287)
T ss_dssp CCE-----EHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCC-----CHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 947-----8899987877026178677567899999999835
No 28
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=97.99 E-value=0.0015 Score=45.90 Aligned_cols=162 Identities=10% Similarity=0.075 Sum_probs=99.7
Q ss_pred EEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCCC------CCCCC---C--HHHHHHHH-HHHHHHH
Q ss_conf 49999983303185357789999999999998628-96899976888------77652---1--24677778-8999999
Q gi|254780820|r 121 KLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASGG------ARMQE---G--ILSLMQLP-RTTIAIN 187 (284)
Q Consensus 121 ~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SGG------aRMqE---G--~~sL~qMa-kt~~a~~ 187 (284)
.|.+..+|--=-.-++....-..+..+++.+.++. +-+|++..+|+ +.+.+ . .-...++. .....+.
T Consensus 9 ~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~ 88 (250)
T 2a7k_A 9 EVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQ 88 (250)
T ss_dssp TEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999974888679999999999999999996399964999982899966588763333322330568999988999999
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH----------HHHHHCCC------CCCCCHHHH
Q ss_conf 99862998899856764201111201468525553142110232788----------78763677------887202159
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV----------IEQTVREK------LPDGFQRSE 251 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV----------i~~t~~~~------lp~~fqtae 251 (284)
++.....|+|+.+.++|.||- ..+++..|+.|+.+++.+++.--++ ....+|.. +--.--+|+
T Consensus 89 ~i~~~~kpvIaai~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~iG~~~a~~lll~g~~~~a~ 167 (250)
T 2a7k_A 89 AVLNVNKPTIAAVDGYAIGMG-FQFALMFDQRLMASTANFVMPELKHGIGCSVGAAILGFTHGFSTMQEIIYQCQSLDAP 167 (250)
T ss_dssp HHHTCCSCEEEEECSEEETHH-HHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHHHHHHHHCHHHHHHHHHHCCCBCHH
T ss_pred HHHHCCCCEEEEECCEEECCC-CHHHHCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 999679874886676274264-4323224545234142776403555255761687898873399999999839900689
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 99968983537358999999999999972378
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
..++.|+||.|++..++.+....+..-+.+++
T Consensus 168 eA~~~Glv~~v~~~~~l~~~a~~~a~~la~~~ 199 (250)
T 2a7k_A 168 RCVDYRLVNQVVESSALLDAAITQAHVMASYP 199 (250)
T ss_dssp HHHHHTCCSEEECHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 99980997777684799999999999998589
No 29
>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=97.98 E-value=0.0013 Score=46.19 Aligned_cols=156 Identities=12% Similarity=0.164 Sum_probs=97.2
Q ss_pred EEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------CCCCCCCH--------HHHHHHH-HHHHHHHH
Q ss_conf 998330318535778999999999999862-89689997688------87765212--------4677778-89999999
Q gi|254780820|r 125 VVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------GARMQEGI--------LSLMQLP-RTTIAINM 188 (284)
Q Consensus 125 ~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------GaRMqEG~--------~sL~qMa-kt~~a~~~ 188 (284)
..+|--=-.-++....-+.+..+++.+.++ .+-+|++..+| |+.+.|-. ..+..+. .....+.+
T Consensus 17 itlnrP~~~Nals~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (263)
T 3lke_A 17 ITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLE 96 (263)
T ss_dssp EEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99758886689899999999999999850999579999638986416886210232001111157788889999999999
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHHHCCCC-------CCCCHHH
Q ss_conf 986299889985676420111120146852555314211023278-----------8787636778-------8720215
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQTVREKL-------PDGFQRS 250 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t~~~~l-------p~~fqta 250 (284)
+.....|+|+.+.++|.||- ..++..+|+.|+.+.+.+++.-.+ ...+.+|... .+. -+|
T Consensus 97 l~~~pkPvIaav~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~r~~G~~~a~~l~l~g~~-~~a 174 (263)
T 3lke_A 97 IFTSPKVTVALINGYAYGGG-FNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKL-FTS 174 (263)
T ss_dssp HHTCSSEEEEEECSEEETHH-HHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCC-EEH
T ss_pred HHHCCCCEEEEECCCCCCCC-HHHHHHCCEEEECCCCEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCC
T ss_conf 98399989999768356065-4887402010224666142631146537782078999999768999999965997-433
Q ss_pred HHHHHCCCCCEEEC-HHHHHHHHHHHHHHHHCC
Q ss_conf 99996898353735-899999999999997237
Q gi|254780820|r 251 EYLVEHGMIDRIVH-RHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 251 e~l~~~G~iD~iv~-r~~l~~~i~~ll~il~~~ 282 (284)
+..++.|+||.|++ ++++.+.+..++.-+.++
T Consensus 175 ~eA~~~Glv~~vv~~~~~l~~~~~~~a~~i~~~ 207 (263)
T 3lke_A 175 EEALRLGLIQEICENKQELQERVKNYLKAVSEG 207 (263)
T ss_dssp HHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCC
T ss_conf 148877972487399899999999999999809
No 30
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=97.96 E-value=0.00091 Score=47.43 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=100.9
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCCC-----CCCCC-----CHHHHHHHH-HHHHHHHHH
Q ss_conf 9999983303185357789999999999998628-96899976888-----77652-----124677778-899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASGG-----ARMQE-----GILSLMQLP-RTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SGG-----aRMqE-----G~~sL~qMa-kt~~a~~~l 189 (284)
|+...+|--=-.-++....-+.+..+++.+.++. +-+|++..+|+ +.+.| +--...++. .....+.++
T Consensus 36 Va~ItlnrP~~~Nals~~~~~eL~~al~~~~~d~~vrvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (286)
T 3myb_A 36 VVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAI 115 (286)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89999758887789899999999999999974899569999569997137878899834676778888887778999999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC------HHHHHHHHCCCCCC----------CCHHHHHH
Q ss_conf 862998899856764201111201468525553142110232------78878763677887----------20215999
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG------RRVIEQTVREKLPD----------GFQRSEYL 253 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG------~rVi~~t~~~~lp~----------~fqtae~l 253 (284)
.....|+|+.+.++|.||-. .+++..|+.|+.+++.+++.. |...-...-.-++. .--+++..
T Consensus 116 ~~~~kPvIaav~G~a~GgG~-~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~l~~~vG~~~a~~llltg~~~~a~eA 194 (286)
T 3myb_A 116 QRLPAPVIARVHGIATAAGC-QLVAMCDLAVATRDARFAVSGINVGLFCSTPGVALSRNVGRKAAFEMLVTGEFVSADDA 194 (286)
T ss_dssp HHSSSCEEEEECSCEETHHH-HHHHHSSEEEEETTCEEECGGGGGTCCCHHHHHHHTTTSCHHHHHHHHHHCCCEEHHHH
T ss_pred HHCCCCEEEEECCEEEHHHH-HHHHHCCEEEECCCCEEECCCEEECCCCCCCCCCHHHHHCHHHHHHHHHCCCEECHHHH
T ss_conf 84999889998898752668-89871666897699889886301550678765414767189999999556975577899
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 96898353735899999999999997237
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
++-|+||.|++..++.+....++.-+.++
T Consensus 195 ~~~Glv~~vv~~~~~~~~a~~~a~~l~~~ 223 (286)
T 3myb_A 195 KGLGLVNRVVAPKALDDEIEAMVSKIVAK 223 (286)
T ss_dssp HHHTSCSEEECGGGHHHHHHHHHHHHHHS
T ss_pred HHCCCCEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 87799745178678999999999999738
No 31
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=97.94 E-value=0.00076 Score=48.04 Aligned_cols=159 Identities=17% Similarity=0.188 Sum_probs=105.7
Q ss_pred EECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCC-----CCCCCCC---HH-------------
Q ss_conf 7041499999833031853577899999999999986-289689997688-----8776521---24-------------
Q gi|254780820|r 117 VRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASG-----GARMQEG---IL------------- 174 (284)
Q Consensus 117 I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SG-----GaRMqEG---~~------------- 174 (284)
|.|. |....+|--=-.-+|+...-+.+..+++.+.+ ..+-+|++..+| |+.+.+- ..
T Consensus 41 ~~~~-Va~ItLnrP~~~Nals~~m~~el~~~l~~~~~d~~vrviVltG~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 119 (333)
T 3njd_A 41 VTDR-VARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVL 119 (333)
T ss_dssp EETT-EEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTT
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 9999-999997675647899999999999999999729994599997899985588876887612323345542000111
Q ss_pred ------------------HHHH-HHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-
Q ss_conf ------------------6777-78899999999862998899856764201111201468525553142110232788-
Q gi|254780820|r 175 ------------------SLMQ-LPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV- 234 (284)
Q Consensus 175 ------------------sL~q-Makt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV- 234 (284)
...+ +.+....+..+.....|+|+.+-++|.||= ..+++..|+.||.+++.+++.--++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~G 198 (333)
T 3njd_A 120 SGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGG-TDIALHADQVIAAADAKIGYPPMRVW 198 (333)
T ss_dssp CHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHH-HHHHTTSSEEEECTTCEEECGGGGTT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECC-CEECCCCCEEEECCCCEEECCCEEEC
T ss_conf 01455420354223452678999999999999999589988999788786243-31103577799879988988704412
Q ss_pred ----------------HHHH--HCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf ----------------7876--36778872021599996898353735899999999999997237
Q gi|254780820|r 235 ----------------IEQT--VREKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 235 ----------------i~~t--~~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
.... +++.+ +|+..++.|+||.||+..++.+....+.+-+.++
T Consensus 199 ~~p~~~~l~r~iG~~~A~~llltg~~i-----~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 259 (333)
T 3njd_A 199 GVPAAGLWAHRLGDQRAKRLLFTGDCI-----TGAQAAEWGLAVEAPDPADLDARTERLVERIAAM 259 (333)
T ss_dssp CCCTTCCHHHHHCHHHHHHHHTTCCEE-----EHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTS
T ss_pred CCCCCCHHHHHHCHHHHHHHHHHCCCC-----HHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCC
T ss_conf 677520565651579899998608830-----2999998799019628778999999999999868
No 32
>3ome_A Enoyl-COA hydratase; ssgcid, structural genomics, structural genomics center for infectious disease, lyase; 2.05A {Mycobacterium smegmatis str}
Probab=97.89 E-value=0.00084 Score=47.69 Aligned_cols=160 Identities=14% Similarity=0.130 Sum_probs=103.5
Q ss_pred EECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCC-----CCCCCCCHH---------HHHHHH-
Q ss_conf 7041499999833031853577899999999999986-289689997688-----877652124---------677778-
Q gi|254780820|r 117 VRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASG-----GARMQEGIL---------SLMQLP- 180 (284)
Q Consensus 117 I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SG-----GaRMqEG~~---------sL~qMa- 180 (284)
+++. |++..+|--=-.-+|....-+-+..+++.+.+ ..+.+|++...| |+-..++.. .+..+.
T Consensus 29 ~~~~-Va~ItlnrP~~~Nals~~~~~eL~~al~~~~~d~~v~~vVltg~g~~F~~G~dl~~~~~~~~~~~~~~~~~~~~~ 107 (282)
T 3ome_A 29 VADS-IATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLRGGGEVPEKISLEFIIQHEAR 107 (282)
T ss_dssp EETT-EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC-------CCCHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999-999997584646899999999999999999868891799982687740135224312444433202455788999
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH----------HHH----------HHC
Q ss_conf 899999999862998899856764201111201468525553142110232788----------787----------636
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV----------IEQ----------TVR 240 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV----------i~~----------t~~ 240 (284)
.....+.++.....|+|+.+.++|.||= ..+++.+|+.|+.+++.+++.-.++ ... .+|
T Consensus 108 ~~~~~~~~l~~~~kPvIaav~G~a~GgG-~~lal~~D~ria~~~a~~~~~e~~~g~~~~~~~~l~~~~g~~~A~~llltG 186 (282)
T 3ome_A 108 RYLDYTLRWRNVPKPSIAAVQGRCISGG-LLLCWPCDLILASDDALFSDPVALMGIGGVEYHGHTWELGPRKAKEILFTG 186 (282)
T ss_dssp HTTHHHHHHHHCSSCEEEEECSEEEGGG-HHHHTTSSEEEEETTCEEECCGGGGTCSSCSSCCHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHH-HHHHHHCCHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999998199989999658313268-999760041553557676345235610643025788886178999999728
Q ss_pred CCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 7788720215999968983537358999999999999972378
Q gi|254780820|r 241 EKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 241 ~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+. -+|+..++.|+||.||+..++.+....++.-+.+++
T Consensus 187 ~~-----~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~ 224 (282)
T 3ome_A 187 RA-----LTAEEAERTGMVNRVVARDELDAQTRELAEQIATMP 224 (282)
T ss_dssp CE-----EEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHTTSC
T ss_pred CC-----CCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 85-----679998654996674176899999999999998679
No 33
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=97.89 E-value=0.00069 Score=48.32 Aligned_cols=148 Identities=16% Similarity=0.221 Sum_probs=95.1
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 9999983303185357789999999999998628968999768887-----76521246777788999999998629988
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGA-----RMQEGILSLMQLPRTTIAINMLKDAGLPY 196 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGa-----RMqEG~~sL~qMakt~~a~~~l~~~~lP~ 196 (284)
|...-+|--=-.-++....-+.+..+++.+.+..+-+|++..+|+. .+.+-...............++.....|+
T Consensus 31 V~~ItlnrP~~~Nal~~~m~~eL~~~l~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~i~~~~kpv 110 (264)
T 3he2_A 31 VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDASPMPV 110 (264)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHCC---CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHCSSCE
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 99999748464689899999999999997018995599996899851345454344430103589999999998589989
Q ss_pred EEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHH-----------HCCCCCCCCHHHHHHH
Q ss_conf 99856764201111201468525553142110232788-----------7876-----------3677887202159999
Q gi|254780820|r 197 IVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQT-----------VREKLPDGFQRSEYLV 254 (284)
Q Consensus 197 I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t-----------~~~~lp~~fqtae~l~ 254 (284)
|+.+.++|.||-. .++...|++|+.+++.+++...++ ..+. +++.+ +|+..+
T Consensus 111 Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~iG~~~a~~lll~g~~~-----~a~eA~ 184 (264)
T 3he2_A 111 VGAINGPAIGAGL-QLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL-----TAEIAL 184 (264)
T ss_dssp EEEECSCEETHHH-HHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCE-----EHHHHH
T ss_pred EEEECCEEEHHHH-HHHHHCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCC-----CHHHHH
T ss_conf 9997785644889-9998446665203444547401230067716888999981916778999838978-----889997
Q ss_pred HCCCCCEEECHHHHHHHHHHH
Q ss_conf 689835373589999999999
Q gi|254780820|r 255 EHGMIDRIVHRHDIPEVVSSL 275 (284)
Q Consensus 255 ~~G~iD~iv~r~~l~~~i~~l 275 (284)
+.|+||.|++..+..+...+|
T Consensus 185 ~~GLv~~v~~~~e~~~~a~~l 205 (264)
T 3he2_A 185 HTGMANRIGTLADAQAWAAEI 205 (264)
T ss_dssp HHTSCSEECCHHHHHHHHHHH
T ss_pred HCCCCCEECCHHHHHHHHHHH
T ss_conf 689463854679999999999
No 34
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=97.88 E-value=0.0013 Score=46.23 Aligned_cols=146 Identities=17% Similarity=0.145 Sum_probs=95.4
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH-H------------HHHHH-HHHHHHHHHHCCCCEE
Q ss_conf 18535778999999999999862896899976888776521246-7------------77788-9999999986299889
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILS-L------------MQLPR-TTIAINMLKDAGLPYI 197 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~s-L------------~qMak-t~~a~~~l~~~~lP~I 197 (284)
-.-++....-+-+..+++.+.....-+|++..+|..=--.+-+. + ..+.+ ....+..+.....|+|
T Consensus 26 ~~Nal~~~~~~el~~al~~~~~d~~~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI 105 (261)
T 2gtr_A 26 ENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPII 105 (261)
T ss_dssp STTEECHHHHHHHHHHHHHHHHSSCSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 03588999999999999998629976999978998646688873542211233202478999999887678750999899
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHH-----------HCCCCCCCCHHHHHHHH
Q ss_conf 985676420111120146852555314211023278-----------87876-----------36778872021599996
Q gi|254780820|r 198 VVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQT-----------VREKLPDGFQRSEYLVE 255 (284)
Q Consensus 198 ~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t-----------~~~~lp~~fqtae~l~~ 255 (284)
+.+.++|.||= +.++...|+.|+.+++.+++.-.+ ...+. +++.+ +|+..++
T Consensus 106 aav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~G~~~a~~l~l~g~~~-----~a~eA~~ 179 (261)
T 2gtr_A 106 VAVNGPAIGLG-ASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKL-----TAQEACG 179 (261)
T ss_dssp EEECSCEETHH-HHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCE-----EHHHHHH
T ss_pred EEECCEEEECC-CHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-----CHHHHHH
T ss_conf 99878146621-17530001412335456553210147778843477899981952224542356767-----7889976
Q ss_pred CCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 8983537358999999999999972378
Q gi|254780820|r 256 HGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 256 ~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
.|+||.||+..++.+....+..-|.+++
T Consensus 180 ~Glv~~vv~~~~l~~~a~~~a~~la~~~ 207 (261)
T 2gtr_A 180 KGLVSQVFWPGTFTQEVMVRIKELASCN 207 (261)
T ss_dssp TTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 7973687081889999999999998089
No 35
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on protein structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=97.87 E-value=0.0019 Score=45.07 Aligned_cols=161 Identities=15% Similarity=0.111 Sum_probs=104.2
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCC-----CCCCCC---CHHHHHH-HHHHHHHHHHHHH
Q ss_conf 99999833031853577899999999999986-289689997688-----877652---1246777-7889999999986
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASG-----GARMQE---GILSLMQ-LPRTTIAINMLKD 191 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SG-----GaRMqE---G~~sL~q-Makt~~a~~~l~~ 191 (284)
|.+..+|--=-.-++....-.-+..+++.+.+ ..+-+|++..+| |+.+.| ....... ..+....+.++.+
T Consensus 13 v~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~l~~ 92 (257)
T 2ej5_A 13 VAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHH 92 (257)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99999758987789999999999999999964989089999789988657776798642000135677666789998753
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHHHCCC------CCCCCHHHHHHH
Q ss_conf 299889985676420111120146852555314211023278-----------878763677------887202159999
Q gi|254780820|r 192 AGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQTVREK------LPDGFQRSEYLV 254 (284)
Q Consensus 192 ~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t~~~~------lp~~fqtae~l~ 254 (284)
-..|+|+.+.++|.||=. ..++..|+.||.+++.+|+...+ .....++.. +--..-+++..+
T Consensus 93 ~~kP~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~ 171 (257)
T 2ej5_A 93 LEKPVVAAVNGAAAGAGM-SLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAA 171 (257)
T ss_dssp CCSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCEEEHHHH-HHHHHCCEEEECCCCEEECHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH
T ss_conf 699599997884646889-9998506898368878983432618688603999999995740266786417989888998
Q ss_pred HCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 68983537358999999999999972378
Q gi|254780820|r 255 EHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 255 ~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+.|+||.+++..++.+....+..-+.+++
T Consensus 172 ~~Glv~~v~~~~~l~~~~~~~~~~l~~~~ 200 (257)
T 2ej5_A 172 ALGLATKVIPLSDWEEEVKQFAERLSAMP 200 (257)
T ss_dssp HHTCCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred HCCCEEEEECHHHHHHHHHHHHHHHHHCC
T ss_conf 78963897287899999999999988442
No 36
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=97.85 E-value=0.0032 Score=43.42 Aligned_cols=150 Identities=11% Similarity=0.060 Sum_probs=92.6
Q ss_pred HCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCC-----CCCCCC-----HHHHHHH-HHHHHHHHHHHHCCCCEEEE
Q ss_conf 1853577899999999999986-2896899976888-----776521-----2467777-88999999998629988998
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGG-----ARMQEG-----ILSLMQL-PRTTIAINMLKDAGLPYIVV 199 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGG-----aRMqEG-----~~sL~qM-akt~~a~~~l~~~~lP~I~v 199 (284)
-.-++....-+.+..+++.+.+ ..+-+|++...|. +.+.+- .-...+. ......+.++.+-..|.|++
T Consensus 44 ~~Nal~~~~~~eL~~al~~~~~d~~i~vvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~PvIa~ 123 (263)
T 2j5g_A 44 SSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISA 123 (263)
T ss_dssp BSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 77888999999999999999759998599997889975288723133444553101466789999999999669975876
Q ss_pred ECCCCCCEEEEEECCCCCEEEEECCCEE-EC-------C----CHHHHHHHHCCC------CCCCCHHHHHHHHCCCCCE
Q ss_conf 5676420111120146852555314211-02-------3----278878763677------8872021599996898353
Q gi|254780820|r 200 LTNPTTGGVTASYAMLGDIHLAEPGAEI-GF-------A----GRRVIEQTVREK------LPDGFQRSEYLVEHGMIDR 261 (284)
Q Consensus 200 l~~pt~GGv~AS~a~lgDiiiaep~a~i-gF-------a----G~rVi~~t~~~~------lp~~fqtae~l~~~G~iD~ 261 (284)
+.++|.||. .++..+|++|+.+++.. +| . +.......+|.. +.-..-+|+..++.|+||.
T Consensus 124 v~G~a~GGg--~lal~cD~~ia~~~a~f~~~pe~~~G~~p~~g~~~~l~~~iG~~~a~~llltg~~i~a~eA~~~Glv~~ 201 (263)
T 2j5g_A 124 VNGAALLHS--EYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHE 201 (263)
T ss_dssp ECSEECSCG--GGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSE
T ss_pred ECCCEEEEE--EECCCCCEEEECCCCEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEE
T ss_conf 188547887--742556347864786687641111166767560778898846999976561398012999977799309
Q ss_pred EECHHHHHHHHHHHHHHHHCCC
Q ss_conf 7358999999999999972378
Q gi|254780820|r 262 IVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 262 iv~r~~l~~~i~~ll~il~~~~ 283 (284)
||+..++.+....+.+-+.+++
T Consensus 202 vv~~~~l~~~a~~~a~~ia~~~ 223 (263)
T 2j5g_A 202 VLPQSKLMERAWEIARTLAKQP 223 (263)
T ss_dssp EECGGGHHHHHHHHHHHHHTSC
T ss_pred EECHHHHHHHHHHHHHHHHCCC
T ss_conf 8787899999999999998689
No 37
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, structural genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=97.84 E-value=0.0027 Score=44.01 Aligned_cols=161 Identities=12% Similarity=0.121 Sum_probs=100.8
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCCC-------CHH-HHHHHHH-HHHHHH
Q ss_conf 999998330318535778999999999999862896899976888-----77652-------124-6777788-999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGG-----ARMQE-------GIL-SLMQLPR-TTIAIN 187 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGG-----aRMqE-------G~~-sL~qMak-t~~a~~ 187 (284)
|....+|--=-.-++....-+.+..+++.+.++..-+|+++.+|+ +.+.| +.. ...++.. ....+.
T Consensus 36 I~~ItlnrP~~~Nals~~~~~el~~~l~~~~~d~~v~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 2f6q_A 36 ITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVG 115 (280)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCSEEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999758987789899999999999998744999899996899877689867887413223320145778999999999
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------CHHHHHHHHCCC------CCCCCHHH
Q ss_conf 9986299889985676420111120146852555314211023-----------278878763677------88720215
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------GRRVIEQTVREK------LPDGFQRS 250 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G~rVi~~t~~~~------lp~~fqta 250 (284)
++.+-..|+|+.+.++|.||= ..++...|+.|+.+++.++|. |.......+|.. +--..=+|
T Consensus 116 ~l~~~~kPvIaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~g~~~~l~~~vG~~~a~~lll~g~~~~a 194 (280)
T 2f6q_A 116 CFIDFPKPLIAVVNGPAVGIS-VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTA 194 (280)
T ss_dssp HHHSCCSCEEEEECSCEETHH-HHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEH
T ss_pred HHHHCCCCEEEEECCEEEECC-CCCCCCCCCCCCCCCCEEECHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCH
T ss_conf 999689988999768687555-4100344532205685897614325858451668997776186777999872798989
Q ss_pred HHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 999968983537358999999999999972378
Q gi|254780820|r 251 EYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 251 e~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+..++.|+||.||+..++.+....++.-+.+++
T Consensus 195 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 227 (280)
T 2f6q_A 195 GEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLP 227 (280)
T ss_dssp HHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSC
T ss_pred HHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 999877993588085799999999999998689
No 38
>2fbm_A Y chromosome chromodomain protein 1, telomeric isoform B; acetyltransferase, structural genomics, structural genomics consortium, SGC; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=97.84 E-value=0.00025 Score=51.57 Aligned_cols=160 Identities=18% Similarity=0.171 Sum_probs=102.7
Q ss_pred EEEEEEEC-HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC-----CCCCCCCHHHHH--------HHHH-HHHHH
Q ss_conf 99999833-031853577899999999999986289689997688-----877652124677--------7788-99999
Q gi|254780820|r 122 LVAVVHEF-SFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASG-----GARMQEGILSLM--------QLPR-TTIAI 186 (284)
Q Consensus 122 vvv~~~df-~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SG-----GaRMqEG~~sL~--------qMak-t~~a~ 186 (284)
|+...+|. -=-.-+++...-+.+..+++.+.+...-+|++...| |+.+.+-...+. .+.. ....+
T Consensus 33 va~itln~rP~~~Nal~~~~~~eL~~al~~~~~d~~~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (291)
T 2fbm_A 33 FTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFV 112 (291)
T ss_dssp EEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999798972357989999999999999987399879999788995674887554532222321023799999999999
Q ss_pred HHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHHHCCC------CCCCCHH
Q ss_conf 99986299889985676420111120146852555314211023278-----------878763677------8872021
Q gi|254780820|r 187 NMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQTVREK------LPDGFQR 249 (284)
Q Consensus 187 ~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t~~~~------lp~~fqt 249 (284)
.++.....|.|+.+.++|.||- ..++...|+.|+.+.|.+++.-.+ .....+|.. +--.--+
T Consensus 113 ~~l~~~~kPvIAav~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~Gi~p~~~~~~~l~r~iG~~~a~~llltg~~~~ 191 (291)
T 2fbm_A 113 NTFIQFKKPIVVSVNGPAIGLG-ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLT 191 (291)
T ss_dssp HHHHHCCSCEEEEECSCEETHH-HHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEE
T ss_pred HHHHHCCCCEEEEECCEECCCC-CCEEECCCEECCCHHHHHHHHHCEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCC
T ss_conf 9998679989999799103188-730023565301443332311200065346544310045504568879998087245
Q ss_pred HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 599996898353735899999999999997237
Q gi|254780820|r 250 SEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 250 ae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
|+..++.|+||.||+..++.+....+.+-+.+.
T Consensus 192 a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 224 (291)
T 2fbm_A 192 AREACAKGLVSQVFLTGTFTQEVMIQIKELASY 224 (291)
T ss_dssp HHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTS
T ss_pred HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
T ss_conf 999998499308708268999999999999867
No 39
>2iex_A Dihydroxynapthoic acid synthetase; crotonase-like family, beta-BETA-alpha, coenzyme biosyntheses, naphthoate synthase; 2.20A {Geobacillus kaustophilus HTA426} PDB: 2uzf_A*
Probab=97.83 E-value=0.0024 Score=44.27 Aligned_cols=156 Identities=13% Similarity=0.235 Sum_probs=100.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCC-----CCCC-----CHHHHHH-HH-HHHHHHHH
Q ss_conf 999998330318535778999999999999862-8968999768887-----7652-----1246777-78-89999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGA-----RMQE-----GILSLMQ-LP-RTTIAINM 188 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGa-----RMqE-----G~~sL~q-Ma-kt~~a~~~ 188 (284)
|+...+|--=-.-+++...-+.+..+++.+.++ .+-+|++..+|+. .+.+ +...-.+ +. ....-+..
T Consensus 22 V~~itlnrp~~~Nals~~m~~~l~~al~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (272)
T 2iex_A 22 IAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRL 101 (272)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBC---------------CCCTHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999757353579899999999999999861999559998437865400377187760356420245677777789999
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHH-----------HCCCCCCC
Q ss_conf 9862998899856764201111201468525553142110232788-----------7876-----------36778872
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQT-----------VREKLPDG 246 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t-----------~~~~lp~~ 246 (284)
+..-..|+|+.+.++|.||= ...+...|+.|+.++|.+++..-++ .... +++.+
T Consensus 102 ~~~~~kPvIAav~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~lGl~p~~~~~~~l~r~vg~~~a~~lll~g~~i--- 177 (272)
T 2iex_A 102 IRVIPKPVIAMVAGYAIGGG-HVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQY--- 177 (272)
T ss_dssp HHHSSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCE---
T ss_pred HHHCCCCEEEEECCEEEHHH-HHHHHCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---
T ss_conf 98399989999889843789-99986036445668878987500134076601578999997299999999708865---
Q ss_pred CHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 0215999968983537358999999999999972378
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+++..++.|++|.|++..++.+....+.+-+.+++
T Consensus 178 --~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~ 212 (272)
T 2iex_A 178 --TAQEALEMGLVNKVVPLEQLEEETVKWAQEILEKS 212 (272)
T ss_dssp --EHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSC
T ss_pred --CHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCC
T ss_conf --69999767997698077899999999999987269
No 40
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula 19L} PDB: 2q34_A 2q2x_A
Probab=97.82 E-value=0.00044 Score=49.81 Aligned_cols=157 Identities=16% Similarity=0.208 Sum_probs=96.2
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCCCHHHHHHHHH----HHHHHHHHHH
Q ss_conf 999998330318535778999999999999862-89689997688-----8776521246777788----9999999986
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQEGILSLMQLPR----TTIAINMLKD 191 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqEG~~sL~qMak----t~~a~~~l~~ 191 (284)
|+...+|--=-.-++....-+.+..+++.+.++ .+-+|++...| |+.+.+ +.+..+ ....+..+.+
T Consensus 13 v~~itlnrp~~~Nal~~~~~~el~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~----~~~~~~~~~~~~~~~~~l~~ 88 (243)
T 2q35_A 13 VVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEF----LIRKTRGEVEVLDLSGLILD 88 (243)
T ss_dssp EEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHH----HHHHHTTCCCCCCCHHHHHT
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHH----HHCCCHHHHHHHHHHHHHHH
T ss_conf 99999868886789899999999999999976989679999788984479884454----42022113789999999984
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------CHHHHHHHHCCC------CCCCCHHHHHHH
Q ss_conf 299889985676420111120146852555314211023-----------278878763677------887202159999
Q gi|254780820|r 192 AGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------GRRVIEQTVREK------LPDGFQRSEYLV 254 (284)
Q Consensus 192 ~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G~rVi~~t~~~~------lp~~fqtae~l~ 254 (284)
...|+|+.+.++|.||- +.++...|+.|+.+++.+++. |.......+|.. +--..-+++..+
T Consensus 89 ~~kPvIaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~ 167 (243)
T 2q35_A 89 CEIPIIAAMQGHSFGGG-LLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELA 167 (243)
T ss_dssp CCSCEEEEECSEEETHH-HHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCEEEECC-CHHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCHHHHH
T ss_conf 89989999688577166-62020466787524343316500314555676411212234538887765038989899999
Q ss_pred HCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 68983537358999999999999972378
Q gi|254780820|r 255 EHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 255 ~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+.|++|.||+..++.+....+.+-+.+++
T Consensus 168 ~~Glv~~vv~~~~l~~~a~~la~~la~~~ 196 (243)
T 2q35_A 168 ERGIPFPVVSRQDVLNYAQQLGQKIAKSP 196 (243)
T ss_dssp HTTCSSCEECHHHHHHHHHHHHHHHTTSC
T ss_pred HCCCCEECCCHHHHHHHHHHHHHHHHCCC
T ss_conf 77994070885789999999999998389
No 41
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=97.81 E-value=0.0004 Score=50.11 Aligned_cols=147 Identities=13% Similarity=0.078 Sum_probs=90.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCCC-------CHHHHHHHHHHHHHHHHH
Q ss_conf 999998330318535778999999999999862896899976888-----77652-------124677778899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGG-----ARMQE-------GILSLMQLPRTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGG-----aRMqE-------G~~sL~qMakt~~a~~~l 189 (284)
|.+..+|--=-.-+++...-+.+..+++.+-+..+-+|+++.+|. +...| +......+-.....+.++
T Consensus 17 va~itlnrP~~~Nal~~~~~~el~~~l~~~~~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i 96 (267)
T 3hp0_A 17 VCYITFHRPEANNTINDTLIEECLQVLNQCETSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKL 96 (267)
T ss_dssp EEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHSSCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999757774579999999999999999746995599997899873479973225200221002223216899999999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH----------HHHHHCCCC------CCCCHHHHHH
Q ss_conf 862998899856764201111201468525553142110232788----------787636778------8720215999
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV----------IEQTVREKL------PDGFQRSEYL 253 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV----------i~~t~~~~l------p~~fqtae~l 253 (284)
.....|+|+.+.++|.||- +..+...|+.|+.++|.++|..-++ +.+.+|... --.--+|+..
T Consensus 97 ~~~~kpvIaav~G~a~GgG-~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~iG~~~a~~l~ltg~~i~a~eA 175 (267)
T 3hp0_A 97 QTGPYVTISHVRGKVNAGG-LGFVSATDIAIADQTASFSLSELLFGLYPACVLPFLIRRIGRQKAHYMTLMTKPISVQEA 175 (267)
T ss_dssp HHSSSEEEEEECSEEETTH-HHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCCBCHHHH
T ss_pred HHCCCCEEEEEECCEECCH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHH
T ss_conf 7389888999656323130-687776476666540111474125067887024358777296999999862897889999
Q ss_pred HHCCCCCEEECHHHHH
Q ss_conf 9689835373589999
Q gi|254780820|r 254 VEHGMIDRIVHRHDIP 269 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~ 269 (284)
++.|+||.||+..|+.
T Consensus 176 ~~~Glv~~vv~~~d~~ 191 (267)
T 3hp0_A 176 SEWGLIDAFDAESDVL 191 (267)
T ss_dssp HHHTSSSCBCSCTTHH
T ss_pred HHCCCCCEECCCHHHH
T ss_conf 8889946766955999
No 42
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=97.80 E-value=0.003 Score=43.64 Aligned_cols=163 Identities=12% Similarity=0.220 Sum_probs=100.6
Q ss_pred EECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCC-----CCCCCC-----HHHHHHHHHH-HH
Q ss_conf 70414999998330318535778999999999999862-896899976888-----776521-----2467777889-99
Q gi|254780820|r 117 VRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGG-----ARMQEG-----ILSLMQLPRT-TI 184 (284)
Q Consensus 117 I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGG-----aRMqEG-----~~sL~qMakt-~~ 184 (284)
+++. |.+..+|--=. -++....-+.+..+++.+.++ .+-+|+++.+|+ +.+.|- -.....+.+. ..
T Consensus 12 ~~~~-i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (261)
T 3pea_A 12 VEDH-IAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQV 89 (261)
T ss_dssp EETT-EEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHH
T ss_pred EECC-EEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 9999-99999889875-889999999999999999868892899994899973588745554100011100012221246
Q ss_pred HHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHHHCCC------C-CCC
Q ss_conf 9999986299889985676420111120146852555314211023278-----------878763677------8-872
Q gi|254780820|r 185 AINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQTVREK------L-PDG 246 (284)
Q Consensus 185 a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t~~~~------l-p~~ 246 (284)
.+.++.....|+|+.+.++|.||- +.++...|+.|+.+++.+++..-+ ...+.+|.. + .+-
T Consensus 90 ~~~~~~~~~~pvIaav~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~iG~~~a~~l~l~g~~ 168 (261)
T 3pea_A 90 TFERVEKCSKPVIAAIHGAALGGG-LEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTP 168 (261)
T ss_dssp HHHHHHTCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCCEEEEEEEEEEHHH-HHHHHCCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 777766247868999943886288-8877504559987999897873156768661399999999575523331221871
Q ss_pred CHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 0215999968983537358999999999999972378
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
=+|+..++.|++|.+++..++-+....+..-+.+++
T Consensus 169 -~~a~eA~~~Glv~~vv~~~~~~~~~~~~a~~~~~~~ 204 (261)
T 3pea_A 169 -ITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKS 204 (261)
T ss_dssp -EEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred -CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf -449999864997767785899999999999997179
No 43
>3h02_A Naphthoate synthase; IDP00995, lyase, structural genomics, center for structural genomics of infectious diseases, csgid; 2.15A {Salmonella typhimurium}
Probab=97.80 E-value=0.0012 Score=46.53 Aligned_cols=146 Identities=14% Similarity=0.242 Sum_probs=92.3
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEECCC------CCCCCCCH-------HHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 1853577899999999999986289-689997688------87765212-------467777889999999986299889
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKC-PLVMFTASG------GARMQEGI-------LSLMQLPRTTIAINMLKDAGLPYI 197 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~-PlI~~~~SG------GaRMqEG~-------~sL~qMakt~~a~~~l~~~~lP~I 197 (284)
..-++....-+-+..+++.+.++.- =+|++..+| |.-..+-. ............+..+.....|+|
T Consensus 47 ~~Nals~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~d~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI 126 (288)
T 3h02_A 47 VRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVV 126 (288)
T ss_dssp GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCC---------------CCCTHHHHHHHHHHCSSCEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 36799999999999999999739996689998799974234630776643254420145655323689999970999899
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHH-----------CCCCCCCCHHHHHHHH
Q ss_conf 9856764201111201468525553142110232788-----------78763-----------6778872021599996
Q gi|254780820|r 198 VVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTV-----------REKLPDGFQRSEYLVE 255 (284)
Q Consensus 198 ~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~-----------~~~lp~~fqtae~l~~ 255 (284)
+.+.++|+||- +..++.+|+.|+.+++.+++...++ ....+ ++.+ +++..++
T Consensus 127 aav~G~a~GgG-~~la~~cD~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~~a~~l~ltg~~~-----~a~eA~~ 200 (288)
T 3h02_A 127 AMVAGYSIGGG-HVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQY-----DAQQALD 200 (288)
T ss_dssp EEECSEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCCSHHHHHHHHHHCHHHHHHHHHHCCCE-----EHHHHHH
T ss_pred EEECCEEEEHH-HHHHHHCCEEECCCCCEEECHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCC-----CHHHHHH
T ss_conf 99889875063-89987357104169858987244217678665899999984899999999759841-----5999998
Q ss_pred CCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 8983537358999999999999972378
Q gi|254780820|r 256 HGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 256 ~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
.|+||.|++..++.+....+..-+.+++
T Consensus 201 ~Glv~~v~~~~~~~~~a~~~a~~~~~~~ 228 (288)
T 3h02_A 201 MGLVNTVVPLADLEKETVRWCREMLQNS 228 (288)
T ss_dssp TTSSSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred CCCEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 8998785463666999999999998469
No 44
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=97.80 E-value=0.002 Score=44.99 Aligned_cols=157 Identities=12% Similarity=0.149 Sum_probs=101.4
Q ss_pred EEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCH-------------HHHHHHHHHHHHH
Q ss_conf 4999998330318535778999999999999862-8968999768887765212-------------4677778899999
Q gi|254780820|r 121 KLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGI-------------LSLMQLPRTTIAI 186 (284)
Q Consensus 121 ~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~-------------~sL~qMakt~~a~ 186 (284)
+|.+..+|--=-.-+++...-..+..+++.+.++ .+-+|++..+|+.---.+- .....+......+
T Consensus 8 ~ia~itlnrP~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvi~g~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (253)
T 1uiy_A 8 HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLF 87 (253)
T ss_dssp SEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999985877678989999999999999997399965999978886644564067664123455301223212366899
Q ss_pred HHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-------------------HHH--HHCCCCCC
Q ss_conf 999862998899856764201111201468525553142110232788-------------------787--63677887
Q gi|254780820|r 187 NMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-------------------IEQ--TVREKLPD 245 (284)
Q Consensus 187 ~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-------------------i~~--t~~~~lp~ 245 (284)
..+.....|+|+++.++|.||-. ..++..|+.|+.+++.+++.-.++ ..+ .+++.+
T Consensus 88 ~~l~~~~kpvIaai~G~a~GgG~-~lal~cD~ria~~~a~~~~pe~~~g~~~~~g~~~l~~~iG~~~a~~l~l~g~~~-- 164 (253)
T 1uiy_A 88 HRVYTYPKPTVAAVNGPAVAGGA-GLALACDLVVMDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLV-- 164 (253)
T ss_dssp HHHHHCSSCEEEEECSCEETHHH-HHHHTSSEEEEETTCEEECCHHHHTCCCHHHHHHHHHHSCHHHHHHHHHHCCEE--
T ss_pred HHHHHCCCCEEEEECCEEEHHHH-HHHHHCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHHCCCCC--
T ss_conf 99996899889999385762889-999734788954555115740006226745999999987899999987329857--
Q ss_pred CCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 20215999968983537358999999999999972378
Q gi|254780820|r 246 GFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 246 ~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+|+..++.|+||.|++..++.+....+.+.+.+.+
T Consensus 165 ---~a~eA~~~Glv~~v~~~~~~~~~a~~~a~~~~~~~ 199 (253)
T 1uiy_A 165 ---EAREAKALGLVNRIAPPGKALEEAKALAEEVAKNA 199 (253)
T ss_dssp ---EHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSC
T ss_pred ---CHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCC
T ss_conf ---79999867996386576889999999999998279
No 45
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=97.79 E-value=0.0012 Score=46.47 Aligned_cols=159 Identities=19% Similarity=0.203 Sum_probs=101.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCHH--------HHH-HHHHHHHHHHHHHH
Q ss_conf 99999833031853577899999999999986-289689997688877652124--------677-77889999999986
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGGARMQEGIL--------SLM-QLPRTTIAINMLKD 191 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGGaRMqEG~~--------sL~-qMakt~~a~~~l~~ 191 (284)
|....+|--=-.-++....-+.+..+++.+.+ ..+-+|++..+|+.=-..+.+ ... .+......+..+..
T Consensus 10 i~~ItlnrP~~~Nals~~~~~~l~~al~~~~~d~~v~~vvl~~~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (254)
T 3gow_A 10 VLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSG 89 (254)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999768876789999999999999999976889389999678987565630565214523578999999999999971
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCCC-------CCCCHHHHHH
Q ss_conf 2998899856764201111201468525553142110232-----------788787636778-------8720215999
Q gi|254780820|r 192 AGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREKL-------PDGFQRSEYL 253 (284)
Q Consensus 192 ~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~l-------p~~fqtae~l 253 (284)
...|+|+.+.+.|.||- +..++..|+.|+.++|.+++.. .....+.+|... .+-| +++..
T Consensus 90 ~~kPvIa~v~G~a~GgG-~~la~~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~~~ltg~~~-~a~eA 167 (254)
T 3gow_A 90 LEKPLVVAVNGVAAGAG-MSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRL-SAEEA 167 (254)
T ss_dssp CSSCEEEEECSEEETHH-HHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCE-EHHHH
T ss_pred CCCCEEEEECCEEEHHH-HHHHHCCCEEEECCCCEEECHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCEE-CHHHH
T ss_conf 99989999878421254-88775255158738878986110757687524999999986766799998639532-59999
Q ss_pred HHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 96898353735899999999999997237
Q gi|254780820|r 254 VEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 254 ~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
++.|+||.||+..++.+....+..-+.+.
T Consensus 168 ~~~Glv~~vv~~~~l~~~~~~~a~~i~~~ 196 (254)
T 3gow_A 168 LALGLVHRVVPAEKLMEEALSLAKELAQG 196 (254)
T ss_dssp HHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HHCCCEEEEECCHHHHHHHHHHHHHHHHC
T ss_conf 98799799827365688889999999730
No 46
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomics, center for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=97.78 E-value=0.0009 Score=47.47 Aligned_cols=160 Identities=15% Similarity=0.215 Sum_probs=102.2
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCC------CCCCC----CHHHH-HHHHHHHHHHHHH
Q ss_conf 999998330318535778999999999999862-896899976888------77652----12467-7778899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGG------ARMQE----GILSL-MQLPRTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGG------aRMqE----G~~sL-~qMakt~~a~~~l 189 (284)
|+..-+|--=-.-+++...-+.+..+++.+.++ .+-+|++..+|+ ....+ ..... .........+..+
T Consensus 19 i~~Itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (265)
T 3kqf_A 19 VVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMV 98 (265)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 89999768987899999999999999999864899569999658996132431255542000011000013565799999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCCC-------CCCCHHHH
Q ss_conf 862998899856764201111201468525553142110232-----------788787636778-------87202159
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREKL-------PDGFQRSE 251 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~l-------p~~fqtae 251 (284)
.....|.|+.+.++|.||- +..+...|+.|+.+++.+++.. .......+|... -+- =+|+
T Consensus 99 ~~~~kpvIaaV~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~-~~a~ 176 (265)
T 3kqf_A 99 EQLPQPVIAAINGIALGGG-TELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRR-ISAQ 176 (265)
T ss_dssp HTCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCC-EEHH
T ss_pred HHCCCCEEEEEEEEEEEHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCHH
T ss_conf 9689888999966895178-8998737889976998898864487208884288870887329999999984886-7889
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 99968983537358999999999999972378
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
..++.|++|.|++..++.+....+.+-+.+.+
T Consensus 177 ea~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~ 208 (265)
T 3kqf_A 177 EAKEYGLVEFVVPVHLLEEKAIEIAEKIASNG 208 (265)
T ss_dssp HHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred HHHHCCCCCEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 99974997676687899999999999865179
No 47
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=97.76 E-value=0.0019 Score=45.04 Aligned_cols=165 Identities=16% Similarity=0.213 Sum_probs=102.4
Q ss_pred EEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCH-H-HHHHHH---------HHH
Q ss_conf 870414999998330318535778999999999999862-8968999768887765212-4-677778---------899
Q gi|254780820|r 116 NVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGI-L-SLMQLP---------RTT 183 (284)
Q Consensus 116 ~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~-~-sL~qMa---------kt~ 183 (284)
.+++ .|....+|--=-.-++....-+.+..+++.+.++ .+-+|++..+|++ ---|. + .+++.. +..
T Consensus 14 ~~~~-gi~~i~lnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~vvvl~g~g~~-F~aG~Dl~~~~~~~~~~~~~~~~~~~ 91 (276)
T 2j5i_A 14 EIED-GIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEA-WTAGMDLKEYFREVDAGPEILQEKIR 91 (276)
T ss_dssp EEET-EEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTC-SBCCBCHHHHHHHHHHSCTTHHHHHH
T ss_pred EEEC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 9999-999999788886778899999999999999973999179999789886-41788789986410022103566666
Q ss_pred -----HHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC-----
Q ss_conf -----999999862998899856764201111201468525553142110232788-----------78763677-----
Q gi|254780820|r 184 -----IAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK----- 242 (284)
Q Consensus 184 -----~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~----- 242 (284)
..+..+.....|+|+.+.++|.||= +.+++..|+.||.+++.+++.-.++ ..+.+|..
T Consensus 92 ~~~~~~~~~~i~~~~kPvIaav~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~l 170 (276)
T 2j5i_A 92 REASQWQWKLLRMYAKPTIAMVNGWCFGGG-FSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMY 170 (276)
T ss_dssp HHHHHHHTTTTTTCSSCEEEEECSCEEGGG-HHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCEEHHH-HHHHHCCCHHEECCCCCEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHH
T ss_conf 777888999999789989994699450043-4877534410067888400332323248861179999998281455455
Q ss_pred -CCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf -88720215999968983537358999999999999972378
Q gi|254780820|r 243 -LPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 243 -lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+.-..=+|+..++.|+||.||+..++.+....+..-+.+++
T Consensus 171 ll~g~~~~a~eA~~~Glv~~vv~~~el~~~a~~~a~~l~~~~ 212 (276)
T 2j5i_A 171 IMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKN 212 (276)
T ss_dssp HHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC
T ss_pred HCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 305887874689972993476381265999999999998589
No 48
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=97.72 E-value=0.0017 Score=45.52 Aligned_cols=126 Identities=16% Similarity=0.207 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEE-
Q ss_conf 535778999999999999862896-899976888776521246777788999999998629988998567642011112-
Q gi|254780820|r 134 GSIGIAAGEAIVKSCERAIAEKCP-LVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTAS- 211 (284)
Q Consensus 134 GSmG~~~geki~~a~e~A~~~~~P-lI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS- 211 (284)
|.+++...+.+.++++.|.+.+.. +|+...|.|... .+...+..+ ++..+.|.+.+... .||.+||
T Consensus 17 G~I~~~~~~~i~~~l~~a~~~~~kaivL~IdSPGG~v-------~~~~~I~~~---i~~~~~~v~~~v~~--~~~~AaS~ 84 (230)
T 3bpp_A 17 GQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRA-------DAMMNIVQR---IQQSKIPVIIYVYP--PGASAASA 84 (230)
T ss_dssp SSBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCBCH-------HHHHHHHHH---HHTCSSCEEEEECS--TTCEEETH
T ss_pred EEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH-------HHHHHHHHH---HHHCCCCCCEEEEE--CCHHHHHH
T ss_conf 6888699999999999997689986999985988189-------999999999---86046788579997--34467777
Q ss_pred ---ECCCCCEEEEECCCEEECCCHHHH-------------------------HHHHCCC-------C-CCCCHHHHHHHH
Q ss_conf ---014685255531421102327887-------------------------8763677-------8-872021599996
Q gi|254780820|r 212 ---YAMLGDIHLAEPGAEIGFAGRRVI-------------------------EQTVREK-------L-PDGFQRSEYLVE 255 (284)
Q Consensus 212 ---~a~lgDiiiaep~a~igFaG~rVi-------------------------~~t~~~~-------l-p~~fqtae~l~~ 255 (284)
.|+-+|.+++.|++.+|..|+..- .+..+.. + ..-+.+++-.++
T Consensus 85 g~~ia~a~d~i~~~p~s~iGs~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~v~~~~~~~~~eA~~ 164 (230)
T 3bpp_A 85 GTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALK 164 (230)
T ss_dssp HHHHHHTSSEEEECTTCEEECCCCEEECCSSSCCEECCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCCEECHHHHHH
T ss_pred HHHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH
T ss_conf 89988508989978998175645423578850267778888999999999999993949999998876687864999998
Q ss_pred CCCCCEEEC-HHHHHHH
Q ss_conf 898353735-8999999
Q gi|254780820|r 256 HGMIDRIVH-RHDIPEV 271 (284)
Q Consensus 256 ~G~iD~iv~-r~~l~~~ 271 (284)
.|++|.|.. +.++-+.
T Consensus 165 ~GlvD~i~~~~~~ll~~ 181 (230)
T 3bpp_A 165 YGVIEVVARDINELLKK 181 (230)
T ss_dssp TTSCSEECSSHHHHHHH
T ss_pred CCCCCEECCCHHHHHHH
T ss_conf 19730023899999987
No 49
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=97.72 E-value=0.0045 Score=42.30 Aligned_cols=155 Identities=15% Similarity=0.193 Sum_probs=102.5
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCC-----CCCCCCCH----------HHHHHHH-HHHH
Q ss_conf 99999833031853577899999999999986-289689997688-----87765212----------4677778-8999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASG-----GARMQEGI----------LSLMQLP-RTTI 184 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SG-----GaRMqEG~----------~sL~qMa-kt~~ 184 (284)
|+...+|-.=. -+++...-+.+..+++.+.+ ..+-+|++..+| |+-+.+-. ..+.++. ....
T Consensus 17 Va~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (263)
T 3l3s_A 17 VLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSA 95 (263)
T ss_dssp EEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999678665-89999999999999999975889569999789998586752021334444542002467899999999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH------HHH---------------HHCCCC
Q ss_conf 99999862998899856764201111201468525553142110232788------787---------------636778
Q gi|254780820|r 185 AINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV------IEQ---------------TVREKL 243 (284)
Q Consensus 185 a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV------i~~---------------t~~~~l 243 (284)
.+.++.....|.|+.+.++|.||- ..+++..|+.|+.+++.+++...+. .-. .+++.+
T Consensus 96 ~~~~~~~~~kpvIaav~G~a~GgG-~~lal~~D~ria~~~a~~~~p~~~~g~~~~~~~~~l~r~ig~~~a~~l~ltg~~i 174 (263)
T 3l3s_A 96 LMLDLAHCPKPTIALVEGIATAAG-LQLMAACDLAYASPAARFCLPGVQNGGFCTTPAVAVSRVIGRRAVTEMALTGATY 174 (263)
T ss_dssp HHHHHHTCSSCEEEEESSEEETHH-HHHHHHSSEEEECTTCEEECCTTTTTSCCHHHHHHHHTTSCHHHHHHHHHHCCEE
T ss_pred HHHHHHHCCCCEEEEECCCEECCC-HHHHHCCCCCEECCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999998679988998458076141-6345422332221024121642206115101331023345466665422658866
Q ss_pred CCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 8720215999968983537358999999999999972378
Q gi|254780820|r 244 PDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 244 p~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+++..++.|+||.||+..++.+....+..-+.+++
T Consensus 175 -----~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 209 (263)
T 3l3s_A 175 -----DADWALAAGLINRILPEAALATHVADLAGALAARN 209 (263)
T ss_dssp -----EHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSC
T ss_pred -----CHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCC
T ss_conf -----89999986996386288899999999999998689
No 50
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=97.67 E-value=0.001 Score=47.01 Aligned_cols=159 Identities=14% Similarity=0.195 Sum_probs=97.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC-----CCCCC---CCHHHHHHH-HHHHHHHHHHHHC
Q ss_conf 99999833031853577899999999999986289689997688-----87765---212467777-8899999999862
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASG-----GARMQ---EGILSLMQL-PRTTIAINMLKDA 192 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SG-----GaRMq---EG~~sL~qM-akt~~a~~~l~~~ 192 (284)
|.+..+|-.= ..+++...-+.+..+++.+.+.+ .+|+++.+| |+... ....+-.++ ......+..+..-
T Consensus 16 i~~itln~pk-~Nal~~~~~~~l~~~l~~~~~d~-~Vvi~s~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~~l~~~l~~~ 93 (232)
T 3ot6_A 16 VATLTLNNGK-VNAISPDVIIAFNAALDQAEKDR-AIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSH 93 (232)
T ss_dssp EEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHTT-CEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCCC-CCCCCHHHHHHHHHHHHHHCCCC-EEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999988998-89899999999999999855498-299997799967643224311111124667767899999999708
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEECC-C-------EEECCCHH----HHHHHHCCC------CCCCCHHHHHHH
Q ss_conf 99889985676420111120146852555314-2-------11023278----878763677------887202159999
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAMLGDIHLAEPG-A-------EIGFAGRR----VIEQTVREK------LPDGFQRSEYLV 254 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~-a-------~igFaG~r----Vi~~t~~~~------lp~~fqtae~l~ 254 (284)
..|+|+.+.+.|.||- .-+++.+|+.++.++ + .+|+..+. ...+.+|.. +--..=+++..+
T Consensus 94 ~~p~Ia~v~G~~~GgG-~~lal~~D~ria~~~~~~~~~pe~~~Gi~p~~~~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~ 172 (232)
T 3ot6_A 94 PFPIIVACPGHAVAKG-AFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAM 172 (232)
T ss_dssp SSCEEEECCEEEETHH-HHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHHHHH
T ss_pred CCCEEEEEECCEECCC-CHHHHHCCCHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH
T ss_conf 9977999806350662-144551461345305543323001566656763445777772725777898708989899999
Q ss_pred HCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 68983537358999999999999972378
Q gi|254780820|r 255 EHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 255 ~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+.|+||.|++..++.+....+.+-+.+.+
T Consensus 173 ~~Glv~~v~~~~~l~~~a~~~a~~ia~~~ 201 (232)
T 3ot6_A 173 AAGFLDKVVSVEELQGAALAVAAQLKKIN 201 (232)
T ss_dssp HHTSCSEEECTTTHHHHHHHHHHHHTTSC
T ss_pred HCCCCCEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 77997587087899999999999998689
No 51
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics, protein structure initiative; 1.58A {Legionella pneumophila subsp}
Probab=97.65 E-value=0.0017 Score=45.47 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=99.2
Q ss_pred EEEEEEE-CHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCCC-------HHHHHHHHHH-HHHH
Q ss_conf 9999983-30318535778999999999999862-89689997688-----8776521-------2467777889-9999
Q gi|254780820|r 122 LVAVVHE-FSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQEG-------ILSLMQLPRT-TIAI 186 (284)
Q Consensus 122 vvv~~~d-f~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqEG-------~~sL~qMakt-~~a~ 186 (284)
|.+..+| ..- .-++....-+.+..+++.+.++ .+=+|++..+| |+.+.+- .....+..+. ...+
T Consensus 14 v~~itlnrp~~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (268)
T 3i47_A 14 VGLLTMNRISK-HNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLM 92 (268)
T ss_dssp EEEEEECCTTT-TTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999768886-79999999999999999997499906999916777633564155431112221000024678899999
Q ss_pred HHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH----------HHHHHHCCCC------CCCCHHH
Q ss_conf 99986299889985676420111120146852555314211023278----------8787636778------8720215
Q gi|254780820|r 187 NMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR----------VIEQTVREKL------PDGFQRS 250 (284)
Q Consensus 187 ~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r----------Vi~~t~~~~l------p~~fqta 250 (284)
..+.....|+|+.+.++|.||- ...+...|+.||.++|.+++..-+ .....++... --.--+|
T Consensus 93 ~~~~~~~kPvIaav~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~~~~ig~~~a~~l~ltg~~~~a 171 (268)
T 3i47_A 93 YSISQSPKPTIAMVQGAAFGGG-AGLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDA 171 (268)
T ss_dssp HHHHHCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCEEEH
T ss_pred HHHHHCCCCEEEEECCEEEECC-CHHHCCCCEEECCCCCEEECCEEEEEECCCCCHHHHCHHHHHHHHHHHHHCCCCCCH
T ss_conf 9998489878999678585055-211104424562799799874245664576421322203456678998760897888
Q ss_pred HHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 999968983537358999999999999972378
Q gi|254780820|r 251 EYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 251 e~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+..++.|+||.||+..++.+....+.+-+.+.+
T Consensus 172 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~ 204 (268)
T 3i47_A 172 TRAYSLNLVQHCVPDDTLLEFTLKYASQISNNA 204 (268)
T ss_dssp HHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred HHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 999777981086084799999999999997789
No 52
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure initiative; 2.00A {Rhodopseudomonas palustris}
Probab=97.64 E-value=0.0011 Score=46.70 Aligned_cols=162 Identities=12% Similarity=0.093 Sum_probs=101.1
Q ss_pred ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCCCC----HHHHHHHH-HHHHHHH
Q ss_conf 0414999998330318535778999999999999862896899976888-----776521----24677778-8999999
Q gi|254780820|r 118 RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGG-----ARMQEG----ILSLMQLP-RTTIAIN 187 (284)
Q Consensus 118 ~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGG-----aRMqEG----~~sL~qMa-kt~~a~~ 187 (284)
.|. |....+|--=-.-+|....-+-+..+++.+ ++.+-+|++..+|+ +.+.|- .....++. .....+.
T Consensus 23 ~g~-Va~itlnrP~~~Nal~~~~~~~L~~al~~~-d~~~rvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 100 (275)
T 3hin_A 23 VGP-VLTIGLNRPKKRNALNDGLMAALKDCLTDI-PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFD 100 (275)
T ss_dssp ETT-EEEEEECCGGGTTCBCHHHHHHHHHHTSSC-CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHH
T ss_pred ECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899-999996587767898999999999999841-668848999678997458883677532001233556678999999
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCHHH
Q ss_conf 99862998899856764201111201468525553142110232788-----------78763677------88720215
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQRS 250 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fqta 250 (284)
++.....|+|+.+.++|.||- ...+...|++|+.+++.++|.-.++ ....+|.. |--.--+|
T Consensus 101 ~i~~~~kPvIaav~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~iG~~~a~~l~ltg~~~~A 179 (275)
T 3hin_A 101 KIQYCRVPVIAALKGAVIGGG-LELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSA 179 (275)
T ss_dssp HHHTCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEH
T ss_pred HHHHCCCCEEEEECCEEEHHH-HHHHHHCCCCHHHHHCHHHHHHCEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCCCH
T ss_conf 997189988999868774288-9999822613375523324221106225654888889987054677667640896869
Q ss_pred HHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 99996898353735899999999999997237
Q gi|254780820|r 251 EYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 251 e~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+..++.|+||.||+..++.+....+.+-+.++
T Consensus 180 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 211 (275)
T 3hin_A 180 AEGVVHGFSQYLIENGSAYDKALELGNRVAQN 211 (275)
T ss_dssp HHHHHHTSCSEEESSSCHHHHHHHHHHHHTTS
T ss_pred HHHHHCCCCCEECCHHHHHHHHHHHHHHHHCC
T ss_conf 99998399687668258999999999999866
No 53
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA; 1.80A {Geobacillus kaustophilus HTA426} PDB: 2qq3_A
Probab=97.62 E-value=0.0026 Score=44.04 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=96.3
Q ss_pred EEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCHHH-HH-------HHHHHHHHHHHHHH
Q ss_conf 4999998330318535778999999999999862-896899976888776521246-77-------77889999999986
Q gi|254780820|r 121 KLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGILS-LM-------QLPRTTIAINMLKD 191 (284)
Q Consensus 121 ~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~~s-L~-------qMakt~~a~~~l~~ 191 (284)
+|.+..+|--=-.-+++...-+.+..+++.+.++ .+=+|+++.+|+.=-..+-+. +. ...+......++..
T Consensus 14 ~va~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (258)
T 2pbp_A 14 AVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSI 93 (258)
T ss_dssp TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHT
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999983878679999999999999999986099858999907986401275388773132114677777678899851
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCC------CCCCCHHHHHHH
Q ss_conf 2998899856764201111201468525553142110232-----------78878763677------887202159999
Q gi|254780820|r 192 AGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREK------LPDGFQRSEYLV 254 (284)
Q Consensus 192 ~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~------lp~~fqtae~l~ 254 (284)
...|+|+.+.++|.||= ..+++..|+.|+.+++.+++.- .......+|.. +--.-=+++..+
T Consensus 94 ~~~p~Iaai~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~ 172 (258)
T 2pbp_A 94 VKTPMIAAVNGLALGGG-FELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAE 172 (258)
T ss_dssp CCSCEEEEECSEEETHH-HHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHH
T ss_pred CCCCEEEEECCEEEEHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHH
T ss_conf 89988999806576166-89986278799879978987311568798722999999986899999999829978799999
Q ss_pred HCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 6898353735899999999999997237
Q gi|254780820|r 255 EHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 255 ~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+.|+||.||+..++.+....+..-+.+.
T Consensus 173 ~~Glv~~vv~~~~l~~~a~~~a~~la~~ 200 (258)
T 2pbp_A 173 QLGIVNRVVSPELLMEETMRLAGRLAEQ 200 (258)
T ss_dssp HTTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred HCCCEEEEECHHHHHHHHHHHHHHHHHC
T ss_conf 8899018725788888999999999857
No 54
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metabolism, lipid metabolism, lyase; 1.80A {Mycobacterium tuberculosis}
Probab=97.60 E-value=0.00096 Score=47.28 Aligned_cols=160 Identities=13% Similarity=0.162 Sum_probs=96.7
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----CCCCCCCH---HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999983303185357789999999999998628-9689997688-----87765212---4677778899999999862
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASG-----GARMQEGI---LSLMQLPRTTIAINMLKDA 192 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SG-----GaRMqEG~---~sL~qMakt~~a~~~l~~~ 192 (284)
|++..+|--=-.-+++...-+.+..+++.+.++. +-+|++...| |+.+.|.. .+-.........+.++...
T Consensus 35 i~~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (278)
T 3h81_A 35 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAV 114 (278)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHHHTC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999768886789999999999999999975888489999479874003675787652111121367888887775348
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCC------CCCCCHHHHHHHH
Q ss_conf 998899856764201111201468525553142110232-----------78878763677------8872021599996
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREK------LPDGFQRSEYLVE 255 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~------lp~~fqtae~l~~ 255 (284)
..|+|+.+.+.|.||= +.++...|+.|+.++|.+++.. ..-....+|.. +--..-+++..++
T Consensus 115 ~~PvIa~v~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~eA~~ 193 (278)
T 3h81_A 115 RTPTIAAVAGYALGGG-CELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAER 193 (278)
T ss_dssp CSCEEEEECBEEETHH-HHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHH
T ss_pred CCCEEEEECCEECHHH-HHHHHHCCEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH
T ss_conf 9989999807271798-999997899998399889785118166864139999999848999999998299678999998
Q ss_pred CCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 898353735899999999999997237
Q gi|254780820|r 256 HGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 256 ~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
.|++|.|++..++.+....+..-+.+.
T Consensus 194 ~GLv~~vv~~~~~~~~a~~~a~~~a~~ 220 (278)
T 3h81_A 194 SGLVSRVVPADDLLTEARATATTISQM 220 (278)
T ss_dssp HTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CCCCCEECCHHHHHHHHHHHHHHHHCC
T ss_conf 699725000677899999999999818
No 55
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; 2.05A {Streptomyces coelicolor A3}
Probab=97.59 E-value=0.0067 Score=41.03 Aligned_cols=161 Identities=16% Similarity=0.222 Sum_probs=101.5
Q ss_pred EEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCC-----CCCCCCH--------HHHHH-HH
Q ss_conf 870414999998330318535778999999999999862-896899976888-----7765212--------46777-78
Q gi|254780820|r 116 NVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGG-----ARMQEGI--------LSLMQ-LP 180 (284)
Q Consensus 116 ~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGG-----aRMqEG~--------~sL~q-Ma 180 (284)
.+++ .|+..-+|--=-.-+++...-.-+..+++.+.++ .+-+|++..+|. +.+.+=. ....+ +.
T Consensus 22 e~~~-~V~~ItlnrP~~~Nals~~~~~el~~al~~~~~d~~v~~vVitg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 100 (279)
T 3g64_A 22 EITD-GVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNR 100 (279)
T ss_dssp EEET-TEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHH
T ss_pred EEEC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHH
T ss_conf 9989-999999748876789899999999999999960999579999479873681250575431121000245555555
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCH------------HHHHHHH---------
Q ss_conf 8999999998629988998567642011112014685255531421102327------------8878763---------
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGR------------RVIEQTV--------- 239 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~------------rVi~~t~--------- 239 (284)
.....+..+.....|+|+.+.+++.||- ..+++..|+.|+.+++.+++..- ......+
T Consensus 101 ~~~~~~~~i~~~~kPvIaav~G~a~GgG-~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~~g~~~~l~r~iG~~~a~~l~ 179 (279)
T 3g64_A 101 MTGQVVRAVRECPFPVIAALHGVAAGAG-AVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLL 179 (279)
T ss_dssp HHHHHHHHHHHSSSCEEEEECSEEETHH-HHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCEEEHHH-HHHHHHCCEEECCCCCEEECCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHH
T ss_conf 5666667887199989999789653032-899873467641645655362110284765223999999984857999999
Q ss_pred --CCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf --67788720215999968983537358999999999999972378
Q gi|254780820|r 240 --REKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 240 --~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
++.+ +|+..++.|+||.||+..++.+....+..-+.+++
T Consensus 180 l~g~~i-----~a~eA~~~Glv~~vv~~~~l~~~~~~~a~~i~~~~ 220 (279)
T 3g64_A 180 MLGDTV-----RAPEAERIGLISELTEEGRADEAARTLARRLADGP 220 (279)
T ss_dssp HHCCCE-----EHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSC
T ss_pred HCCCCC-----CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 818999-----89999974995403587899999999999987467
No 56
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=97.57 E-value=0.0022 Score=44.61 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=93.5
Q ss_pred CCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCC------CCCCC----CHHHHHHH-HHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 53577899999999999986-2896899976888------77652----12467777-8899999999862998899856
Q gi|254780820|r 134 GSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGG------ARMQE----GILSLMQL-PRTTIAINMLKDAGLPYIVVLT 201 (284)
Q Consensus 134 GSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGG------aRMqE----G~~sL~qM-akt~~a~~~l~~~~lP~I~vl~ 201 (284)
-+++...-+.+..+++.+.+ ..+-+|++..+|+ +.+.| .-....++ ......+.++.....|+|+.+.
T Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa~v~ 105 (260)
T 1sg4_A 26 NSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAIN 105 (260)
T ss_dssp TEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 88999999999999999985899559999828999452899765542101001222125678999997558997899856
Q ss_pred CCCCCEEEEEECCCCCEEEEECCCE--E-------ECCCH----HHHHHHHCCC------CCCCCHHHHHHHHCCCCCEE
Q ss_conf 7642011112014685255531421--1-------02327----8878763677------88720215999968983537
Q gi|254780820|r 202 NPTTGGVTASYAMLGDIHLAEPGAE--I-------GFAGR----RVIEQTVREK------LPDGFQRSEYLVEHGMIDRI 262 (284)
Q Consensus 202 ~pt~GGv~AS~a~lgDiiiaep~a~--i-------gFaG~----rVi~~t~~~~------lp~~fqtae~l~~~G~iD~i 262 (284)
++|.||- ..+++..|+.|+.++|. + |+..+ ....+.+|.. +.-..-+++..++.|+||.|
T Consensus 106 G~a~GgG-~~la~~~D~ria~~~ak~~~~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~v 184 (260)
T 1sg4_A 106 GACPAGG-CLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQV 184 (260)
T ss_dssp EEBCHHH-HHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEE
T ss_pred CCEECCC-CHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCEEE
T ss_conf 7310563-111102332342222322111322344867881045557776089999999982898870677547840464
Q ss_pred ECHHHHHHHHHHHHHHHHCCC
Q ss_conf 358999999999999972378
Q gi|254780820|r 263 VHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 263 v~r~~l~~~i~~ll~il~~~~ 283 (284)
|+..++.+....++.-+.+++
T Consensus 185 v~~~~l~~~a~~~a~~l~~~~ 205 (260)
T 1sg4_A 185 VPEEQVQSTALSAIAQWMAIP 205 (260)
T ss_dssp ECGGGHHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHHHHCCC
T ss_conf 886789999999999997599
No 57
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.14.1.3
Probab=97.51 E-value=0.0041 Score=42.61 Aligned_cols=155 Identities=13% Similarity=0.115 Sum_probs=99.8
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----CCCCCC------CHHHHHH-HHHHHHHHHH
Q ss_conf 9999983303185357789999999999998628-9689997688-----877652------1246777-7889999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASG-----GARMQE------GILSLMQ-LPRTTIAINM 188 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SG-----GaRMqE------G~~sL~q-Makt~~a~~~ 188 (284)
|....++..- .-++....-+-+..+++.+..+. +-+|++...| |+.+.+ .--+..+ +......+..
T Consensus 21 V~~itlrp~~-~Nal~~~~~~el~~~l~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (264)
T 1wz8_A 21 VLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLG 99 (264)
T ss_dssp EEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999989998-788899999999999999866899869999789998438997520255433477888889999999999
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH--------------------HHHHH--HCCCCCCC
Q ss_conf 986299889985676420111120146852555314211023278--------------------87876--36778872
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR--------------------VIEQT--VREKLPDG 246 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r--------------------Vi~~t--~~~~lp~~ 246 (284)
+.....|+|+.+.++|.||= ..++...|+.|+.+++.+++..-+ ....- +++.+
T Consensus 100 i~~~~kPvIaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~i--- 175 (264)
T 1wz8_A 100 PLNFPRPVVAAVEKVAVGAG-LALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPL--- 175 (264)
T ss_dssp HHHSSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCE---
T ss_pred HHHCCCCEEEEECCCCCHHH-HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC---
T ss_conf 99789989999748405288-89998644030115554325321117788842789999999888999999809962---
Q ss_pred CHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 0215999968983537358999999999999972378
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+++..++.|+||.|++..++.+....+.+-+.+++
T Consensus 176 --~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 210 (264)
T 1wz8_A 176 --TGEEAERLGLVALAVEDEKVYEKALEVAERLAQGP 210 (264)
T ss_dssp --EHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred --CHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCC
T ss_conf --69999984996475287899899999999987228
No 58
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=97.49 E-value=0.0016 Score=45.65 Aligned_cols=160 Identities=14% Similarity=0.136 Sum_probs=93.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCHHH--------HHHHHHHHHHHHHHHHC
Q ss_conf 999998330318535778999999999999862-896899976888776521246--------77778899999999862
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGILS--------LMQLPRTTIAINMLKDA 192 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~~s--------L~qMakt~~a~~~l~~~ 192 (284)
|...-+|--=---+++...-+-+..+++.+.++ .+-+|++...|..=--.+-.. -.........+..+..-
T Consensus 20 i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (263)
T 3moy_A 20 VGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQV 99 (263)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCHHHHHCC
T ss_conf 89999848987789899999999999998732898169998678545416763354203563102220121002343049
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCH-----------HHHHHHHCCCC------CCCCHHHHHHHH
Q ss_conf 9988998567642011112014685255531421102327-----------88787636778------872021599996
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGR-----------RVIEQTVREKL------PDGFQRSEYLVE 255 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~-----------rVi~~t~~~~l------p~~fqtae~l~~ 255 (284)
..|.|+.+.++|.||- +.+++..|+.|+.+++.++|.-- ....+.+|... --.--+++..++
T Consensus 100 ~kPvIa~i~G~a~GgG-~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~ 178 (263)
T 3moy_A 100 RKPIVAAVAGYALGGG-CELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAER 178 (263)
T ss_dssp CSCEEEEECBEEETHH-HHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHHHHH
T ss_pred CCCEEEEECCCCHHHH-HHHHHHCCEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 9979999886153999-999997899998299899896418065855028999999852999999998299788999998
Q ss_pred CCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 898353735899999999999997237
Q gi|254780820|r 256 HGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 256 ~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
.|+||.||+..++.+....+..-+.++
T Consensus 179 ~Glv~~vv~~~el~~~a~~~a~~l~~~ 205 (263)
T 3moy_A 179 VGLVSRIVPAADLLDEALAVAQRIARM 205 (263)
T ss_dssp TTSCSEEECGGGHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHHHC
T ss_conf 799679504200058999999999846
No 59
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=97.49 E-value=0.0034 Score=43.23 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=98.9
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCHH-----HHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999998330318535778999999999999862-89689997688877652124-----677778899999999862998
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGIL-----SLMQLPRTTIAINMLKDAGLP 195 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~~-----sL~qMakt~~a~~~l~~~~lP 195 (284)
|....+|-.=-.-++....-+.+..+++.+.++ .+.+|++...|. .---|.. .............++..-..|
T Consensus 16 v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~-~f~~g~~~~~~~~~~~~~~~~~~~~~l~~~~kP 94 (255)
T 3p5m_A 16 VLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGR-AFCSGGDLTGGDTAGAADAANRVVRAITSLPKP 94 (255)
T ss_dssp EEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSS-CSBCEECC---CHHHHHHHHHHHHHHHHHCSSC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9999975888678989999999999999997499927999966676-533577430122234312577999999819998
Q ss_pred EEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------CHHHHHHHHCCC------CCCCCHHHHHHHHCCC
Q ss_conf 89985676420111120146852555314211023-----------278878763677------8872021599996898
Q gi|254780820|r 196 YIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------GRRVIEQTVREK------LPDGFQRSEYLVEHGM 258 (284)
Q Consensus 196 ~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G~rVi~~t~~~~------lp~~fqtae~l~~~G~ 258 (284)
+|+.+.++|.||- +.+++..|+.|+.+.|.++|. |.....+.++.. +.-.--+++..++.|+
T Consensus 95 vIaav~G~a~GgG-~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Gl 173 (255)
T 3p5m_A 95 VIAGVHGAAVGFG-CSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGM 173 (255)
T ss_dssp EEEEECSEEETHH-HHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTS
T ss_pred EEEEECCEEEEHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCC
T ss_conf 9999789887377-899873788997899889677204064655576324554454310021111378788999987699
Q ss_pred CCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 353735899999999999997237
Q gi|254780820|r 259 IDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 259 iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+|.||+..++.+....+.+-+.++
T Consensus 174 v~~vv~~~~l~~~a~~~a~~ia~~ 197 (255)
T 3p5m_A 174 ISHITSADEYESVLTDVLRSVSGG 197 (255)
T ss_dssp CSEECCTTCHHHHHHHHHHHHHTS
T ss_pred CCEEECHHHHHHHHHHHHHHHHCC
T ss_conf 348818279999999999999669
No 60
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=97.47 E-value=0.01 Score=39.63 Aligned_cols=161 Identities=12% Similarity=0.122 Sum_probs=102.0
Q ss_pred EEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCC-----CCCCCC----HHHHHHH-HHHHHHHHHH
Q ss_conf 499999833031853577899999999999986-2896899976888-----776521----2467777-8899999999
Q gi|254780820|r 121 KLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGG-----ARMQEG----ILSLMQL-PRTTIAINML 189 (284)
Q Consensus 121 ~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGG-----aRMqEG----~~sL~qM-akt~~a~~~l 189 (284)
.|.+..+|--=-.-++....-+.+..+++.+.. ..+-+|++...|+ +.+.|- ......+ ......+.++
T Consensus 25 ~v~~i~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 104 (257)
T 1szo_A 25 GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNL 104 (257)
T ss_dssp TEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999978987567999999999999999997499954999966887621576443323444114778899999999998
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEE-EC-------C----CHHHHHHHHCCC------CCCCCHHHH
Q ss_conf 86299889985676420111120146852555314211-02-------3----278878763677------887202159
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEI-GF-------A----GRRVIEQTVREK------LPDGFQRSE 251 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~i-gF-------a----G~rVi~~t~~~~------lp~~fqtae 251 (284)
..-..|+|+++.+.+.||. ..+...|+.|+.+++.. ++ . |.....+.+|.. +--.--+++
T Consensus 105 ~~~~kpvIa~v~g~~~GG~--~lal~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~ 182 (257)
T 1szo_A 105 LSIEVPVIAAVNGPVTNAP--EIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDAR 182 (257)
T ss_dssp HHCCSCEEEEECSCBCSST--HHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHH
T ss_pred HCCCCCEEEEEECCCCEEE--EEECCCCEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHH
T ss_conf 7089718999713555057--75057764898588867537732446477654211107760899999898639816399
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 99968983537358999999999999972378
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
..++.|+||.||+..++.+..-.+..-+.+++
T Consensus 183 eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~ 214 (257)
T 1szo_A 183 TALDYGAVNEVLSEQELLPRAWELARGIAEKP 214 (257)
T ss_dssp HHHHHTSCSEEECHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 99856998877676899999999999998489
No 61
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, quercetin, structural genomics consortium, SGC, alternative splicing; HET: QUE; 1.50A {Homo sapiens}
Probab=97.44 E-value=0.011 Score=39.35 Aligned_cols=153 Identities=12% Similarity=0.155 Sum_probs=95.4
Q ss_pred ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------CCCCCCC-------HHHHHHHHH-H
Q ss_conf 0414999998330318535778999999999999862-89689997688------8776521-------246777788-9
Q gi|254780820|r 118 RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------GARMQEG-------ILSLMQLPR-T 182 (284)
Q Consensus 118 ~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------GaRMqEG-------~~sL~qMak-t 182 (284)
.| .|.+.-+|--=-.-++....-+.+..+++.+... .+-+|++..+| |+.+.+- .-...++.+ .
T Consensus 13 ~g-~v~~itlnrP~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vvltga~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 91 (363)
T 3bpt_A 13 KG-CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREE 91 (363)
T ss_dssp ET-TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHH
T ss_pred EC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 89-99999976888668999999999999999998499976999966899821178167877412233210036777677
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC---------------HHHHHH------HHCC
Q ss_conf 9999999862998899856764201111201468525553142110232---------------788787------6367
Q gi|254780820|r 183 TIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG---------------RRVIEQ------TVRE 241 (284)
Q Consensus 183 ~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG---------------~rVi~~------t~~~ 241 (284)
...+..+..-..|+|+.+.++|.||- ..++..+|+.||.+.+.+++.- ||++.+ .+|+
T Consensus 92 ~~~~~~i~~~~kPvIaav~G~a~GgG-~~la~~~D~~ia~~~a~f~~pe~~~Gl~P~~g~~~~l~rl~g~~a~~l~ltg~ 170 (363)
T 3bpt_A 92 YMLNNAVGSCQKPYVALIHGITMGGG-VGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGF 170 (363)
T ss_dssp HHHHHHHHTCSSCEEEEECSEEETHH-HHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTHHHHHHHHCC
T ss_pred HHHHHHHHHCCCCEEEECCCCEEECC-HHHHCCCEEEECCCCCEEECCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCC
T ss_conf 68999999689989980699473512-55520331310389748924132214688876023421033699999998489
Q ss_pred CCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf 788720215999968983537358999999999999
Q gi|254780820|r 242 KLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCK 277 (284)
Q Consensus 242 ~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~ 277 (284)
.+ +|+-.++.|++|.+|+..++......++.
T Consensus 171 ~~-----~a~eA~~~Glv~~vv~~e~l~~~~~~l~a 201 (363)
T 3bpt_A 171 RL-----KGRDVYRAGIATHFVDSEKLAMLEEDLLA 201 (363)
T ss_dssp CE-----ETHHHHHTTSCSEECCGGGHHHHHHHHHH
T ss_pred CC-----HHHHHHHCCCCEEECCHHHHHHHHHHHHH
T ss_conf 74-----39999985997086385389999999986
No 62
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=97.39 E-value=0.0064 Score=41.21 Aligned_cols=146 Identities=15% Similarity=0.218 Sum_probs=88.5
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------CCCCCCC-----HHHHHHHHHHHHHHHHH
Q ss_conf 999998330318535778999999999999862-89689997688------8776521-----24677778899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------GARMQEG-----ILSLMQLPRTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------GaRMqEG-----~~sL~qMakt~~a~~~l 189 (284)
|+...+|--=-.-+|+...-+-+..+++.+.++ .+-+|++...| |.-+.+- .-....+.+....+..+
T Consensus 22 v~~itlnrP~~~Nal~~~~~~el~~~l~~~~~d~~~~~vVl~g~g~~~F~~G~d~~~~~~~~~~~~~~~~~~~~~~~~~i 101 (272)
T 1hzd_A 22 IVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDI 101 (272)
T ss_dssp EEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89999779987799999999999999999985999649999627887113551000110012034456677899999999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC-----------HHHHHHHHCCCC------CCCCHHHHH
Q ss_conf 862998899856764201111201468525553142110232-----------788787636778------872021599
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG-----------RRVIEQTVREKL------PDGFQRSEY 252 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG-----------~rVi~~t~~~~l------p~~fqtae~ 252 (284)
.+...|.|+.+.+.|.||- ..++...|+.|+.+++.++|.- .......+|... --.--+|+.
T Consensus 102 ~~~~kpvIaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~lll~g~~i~a~e 180 (272)
T 1hzd_A 102 ANLPVPTIAAIDGLALGGG-LELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKE 180 (272)
T ss_dssp HTCSSCEEEEESEEEETHH-HHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHH
T ss_pred HHCCCCEEEEECCEECCCC-CEEECCCCHHHHCCCCEEECCCCCEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 9789989999788033577-511003032230689889775426513675244104303443999987861288468999
Q ss_pred HHHCCCCCEEECHHHH
Q ss_conf 9968983537358999
Q gi|254780820|r 253 LVEHGMIDRIVHRHDI 268 (284)
Q Consensus 253 l~~~G~iD~iv~r~~l 268 (284)
.++.|+||.||+..++
T Consensus 181 A~~~Glv~~vv~~~~~ 196 (272)
T 1hzd_A 181 AKAVGLISHVLEQNQE 196 (272)
T ss_dssp HHHHTSCSEEECCCTT
T ss_pred HHHCCCEEEEECCCHH
T ss_conf 9757972698486333
No 63
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.80A {Streptomyces avermitilis}
Probab=97.39 E-value=0.011 Score=39.56 Aligned_cols=154 Identities=16% Similarity=0.236 Sum_probs=94.3
Q ss_pred EECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECC------CCCCCCCCH--HHHHHHH--------HHHHHHHHH
Q ss_conf 8330318535778999999999999862-8968999768------887765212--4677778--------899999999
Q gi|254780820|r 127 HEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTAS------GGARMQEGI--LSLMQLP--------RTTIAINML 189 (284)
Q Consensus 127 ~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~S------GGaRMqEG~--~sL~qMa--------kt~~a~~~l 189 (284)
.... . -+++...-+-+..+++.+.++ .+-+|++..+ ||+-+.+.. .+..... .....+..+
T Consensus 25 nrP~-~-Nal~~~~~~~L~~al~~~~~d~~vr~vVl~g~g~~ffs~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 102 (287)
T 3gkb_A 25 DNPP-V-NVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELI 102 (287)
T ss_dssp CCTT-T-TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHHHHH
T ss_pred CCCC-C-CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8898-5-8899999999999999998689945999967898855003278876520010333321077889999999999
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEE-CCCEEECC-----------CHHHHHHHHCCCC------CCCCHHHH
Q ss_conf 862998899856764201111201468525553-14211023-----------2788787636778------87202159
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAE-PGAEIGFA-----------GRRVIEQTVREKL------PDGFQRSE 251 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiae-p~a~igFa-----------G~rVi~~t~~~~l------p~~fqtae 251 (284)
.....|+|+.+.++|.||- ..++...|++|+. ..|.+++. |.....+.+|... --.--+|+
T Consensus 103 ~~~pkPvIaav~G~a~GgG-~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~a~ 181 (287)
T 3gkb_A 103 RHQPQVTIVKLAGKARGGG-AEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAE 181 (287)
T ss_dssp HHCSSEEEEEECSEEETHH-HHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred HHCCCCEEEEECCCEEEEC-CHHCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHH
T ss_conf 8399988999579478605-112104663432101001357411346588646899999971888899998658844689
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 99968983537358999999999999972378
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
..++.|+||.||+..++.+....+..-+.+++
T Consensus 182 eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 213 (287)
T 3gkb_A 182 TAASYGWINRALPADELDEYVDRVARNIAALP 213 (287)
T ss_dssp HHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHCCCCEEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 99985990498387899999999999998599
No 64
>3p85_A Enoyl-COA hydratase; ssgcid, mycobacerium avium, structural seattle structural genomics center for infectious disease,; HET: 1PE; 1.90A {Mycobacterium avium}
Probab=97.38 E-value=0.00095 Score=47.32 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=94.8
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCHHH-HHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99999833031853577899999999999986-2896899976888776521246-777788999999998629988998
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGGARMQEGILS-LMQLPRTTIAINMLKDAGLPYIVV 199 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGGaRMqEG~~s-L~qMakt~~a~~~l~~~~lP~I~v 199 (284)
|+...+|--=-.-+++...-+.+..+++.+.. ..+-+|++...|+.=-..+-+. +.+.........++..-..|+|+.
T Consensus 35 Va~ItlnrP~~~Nal~~~~~~el~~al~~~~~d~~vr~vvltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~kPvIaa 114 (270)
T 3p85_A 35 VRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELGGSSALPDISPRWPALTKPVIGA 114 (270)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC------CCCCCCCCCCSSCEEEE
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999658887799899999999999999975989169999799867246751454122113456899998689999999
Q ss_pred ECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCHHHHHHHHCCCCCEE
Q ss_conf 56764201111201468525553142110232788-----------78763677------88720215999968983537
Q gi|254780820|r 200 LTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQRSEYLVEHGMIDRI 262 (284)
Q Consensus 200 l~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fqtae~l~~~G~iD~i 262 (284)
+.++|.||-. ..++..|+.|+.+++.+++..-++ ....++.. |--..-+++..++.|+||.|
T Consensus 115 v~G~a~GgG~-~lal~~D~ria~~~a~f~~pe~~lGl~p~~g~~~~l~~~ig~~~a~~llltg~~~~a~eA~~~Glv~~v 193 (270)
T 3p85_A 115 INGAAVTGGL-ELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEV 193 (270)
T ss_dssp ECSEEETHHH-HHHHHSSEEEEETTCEEECCTTTTTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCEEEHHHH-HHHHHCCEEEECCCCEEECHHHHHCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHCCCEEEE
T ss_conf 8897550779-998626758966887798856751877665753232001232021111003785878999877991297
Q ss_pred ECHHHHHHHHHHHHHHHHCC
Q ss_conf 35899999999999997237
Q gi|254780820|r 263 VHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 263 v~r~~l~~~i~~ll~il~~~ 282 (284)
|+..++.+....+..-|.++
T Consensus 194 v~~~~l~~~a~~~a~~la~~ 213 (270)
T 3p85_A 194 VPHDQLLGAARAVAASIVGN 213 (270)
T ss_dssp ECGGGHHHHHHHHHHHHHTS
T ss_pred ECHHHHHHHHHHHHHHHHCC
T ss_conf 18789999999999999857
No 65
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=97.37 E-value=0.0063 Score=41.21 Aligned_cols=164 Identities=12% Similarity=0.117 Sum_probs=99.6
Q ss_pred EECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCC------CCCCCCCHH---H-----HHHHHH
Q ss_conf 704149999983303185357789999999999998628-9689997688------877652124---6-----777788
Q gi|254780820|r 117 VRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASG------GARMQEGIL---S-----LMQLPR 181 (284)
Q Consensus 117 I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SG------GaRMqEG~~---s-----L~qMak 181 (284)
++| .|....+|--=+ -+++...-+.+..+++.+.++. +-+|++..+| |+.+.|-.- . ......
T Consensus 14 ~~~-~Va~itlnrp~~-Nal~~~m~~eL~~al~~~~~d~~v~vvVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~ 91 (289)
T 3h0u_A 14 LDG-TVLSATFNAPPM-NLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDAS 91 (289)
T ss_dssp EET-TEEEEEECCTTT-CCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCS
T ss_pred EEC-CEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 989-999999578986-889999999999999998539895699992789980114015454443201013433456789
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEE-CCCEEECC-----------CHHHHHHHHCCCC------
Q ss_conf 99999999862998899856764201111201468525553-14211023-----------2788787636778------
Q gi|254780820|r 182 TTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAE-PGAEIGFA-----------GRRVIEQTVREKL------ 243 (284)
Q Consensus 182 t~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiae-p~a~igFa-----------G~rVi~~t~~~~l------ 243 (284)
....+.++..-..|+|+.+.++|.||-. .++...|+.|+. .++.+++. |-......+|...
T Consensus 92 ~~~l~~~l~~~~kPvIaav~G~a~GgG~-~lal~cD~~iaa~e~a~f~~pe~~~Gl~p~~g~~~~l~r~iG~~~a~~lll 170 (289)
T 3h0u_A 92 LGMLFRKLSQLPAVTIAKLRGRARGAGS-EFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVL 170 (289)
T ss_dssp HHHHHHHHHTCSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCHH-HHHHHCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999996899899805995246303-787717713563588615366446525888642577776510999999998
Q ss_pred CCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 8720215999968983537358999999999999972378
Q gi|254780820|r 244 PDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 244 p~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
--.--+|+..++.|+||.||+..++.+....+.+-|.+.+
T Consensus 171 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 210 (289)
T 3h0u_A 171 TSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFP 210 (289)
T ss_dssp HCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 3994769999987997187188799999999999998679
No 66
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=97.34 E-value=0.015 Score=38.54 Aligned_cols=161 Identities=14% Similarity=0.202 Sum_probs=99.0
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCCCH---HH---HHHHHHH----HHH
Q ss_conf 999998330318535778999999999999862-89689997688-----87765212---46---7777889----999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQEGI---LS---LMQLPRT----TIA 185 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqEG~---~s---L~qMakt----~~a 185 (284)
|+...+|--=-.-+++...-+.+..+++.+.++ .+-+|+++..| |+.+.|-. .. ....... ...
T Consensus 13 Va~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (269)
T 1nzy_A 13 VAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQM 92 (269)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999748987789899999999999999985889169999799986357864887641345431156788888889999
Q ss_pred HHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCH
Q ss_conf 9999862998899856764201111201468525553142110232788-----------78763677------887202
Q gi|254780820|r 186 INMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQ 248 (284)
Q Consensus 186 ~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fq 248 (284)
+.++.....|.|+.+.++|.||= ..+++..|+.|+.+++.+++.-.++ ..+.+|.. |--.--
T Consensus 93 ~~~i~~~~kp~Iaav~G~a~GgG-~~lal~~D~ria~~~a~f~~~~~~~g~~p~~g~~~~l~~~iG~~~a~~l~ltg~~~ 171 (269)
T 1nzy_A 93 IHKIIRVKRPVLAAINGVAAGGG-LGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTL 171 (269)
T ss_dssp HHHHHHCSSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCB
T ss_pred HHHHHHCCCCEEEEEHHHHCCCC-HHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCC
T ss_conf 99999689999997330205640-56554121445645301147654262157823899999980946531202348988
Q ss_pred HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 15999968983537358999999999999972378
Q gi|254780820|r 249 RSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 249 tae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+|+..++.|+||.||+..++.+....+.+-+.+++
T Consensus 172 ~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 206 (269)
T 1nzy_A 172 YPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAP 206 (269)
T ss_dssp CHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCC
T ss_conf 79999980998875486899999999999998589
No 67
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=97.33 E-value=0.0023 Score=44.43 Aligned_cols=155 Identities=12% Similarity=0.110 Sum_probs=92.6
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCC-----CCCCCH---HHHHHHHHHHHHHHHHHHC
Q ss_conf 999998330318535778999999999999862-8968999768887-----765212---4677778899999999862
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGA-----RMQEGI---LSLMQLPRTTIAINMLKDA 192 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGa-----RMqEG~---~sL~qMakt~~a~~~l~~~ 192 (284)
|.+.-+|--=-.-+++...-+.+..+++.+.+. .+-+|+++.+|+. .+.+-. ..-....+....+..+...
T Consensus 17 Va~ItlnrP~~~Nals~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (260)
T 1mj3_A 17 VGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI 96 (260)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGC
T ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 89999808886789999999999999999985899079999779995327876565323531456788999999885259
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHH-----------HCCCCCCCCHHH
Q ss_conf 99889985676420111120146852555314211023278-----------87876-----------367788720215
Q gi|254780820|r 193 GLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQT-----------VREKLPDGFQRS 250 (284)
Q Consensus 193 ~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t-----------~~~~lp~~fqta 250 (284)
..|+|+.+.++|.||- ..+++..|+.||.+++.+++..-+ ..... +++.+ ++
T Consensus 97 ~kPvIaai~G~a~GgG-~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~-----~a 170 (260)
T 1mj3_A 97 KKPVIAAVNGYALGGG-CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI-----SA 170 (260)
T ss_dssp SSCEEEEECSEEETHH-HHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCE-----EH
T ss_pred CCCEEEEECCEEEHHH-HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC-----CH
T ss_conf 9829999887561999-99999789999769988989501506586413999999984289999996538714-----77
Q ss_pred HHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 99996898353735899999999999997237
Q gi|254780820|r 251 EYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 251 e~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+-.++-|++|.|++..++......+..-+.++
T Consensus 171 ~eA~~~Glv~~v~~~~~~~~~~~~~~~~~~~~ 202 (260)
T 1mj3_A 171 QDAKQAGLVSKIFPVETLVEEAIQCAEKIANN 202 (260)
T ss_dssp HHHHHHTSCSEEECTTTHHHHHHHHHHHHHHS
T ss_pred HHHHHCCCCEEEECHHHHHHHHHHHHHHHHCC
T ss_conf 88987898178723255579999999999727
No 68
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.30A {Shewanella oneidensis mr-1}
Probab=97.14 E-value=0.022 Score=37.20 Aligned_cols=162 Identities=12% Similarity=0.096 Sum_probs=96.1
Q ss_pred EEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEECCC------CCCCCC---------CH--HH
Q ss_conf 8787041499999833031853577899999999999986289-689997688------877652---------12--46
Q gi|254780820|r 114 VGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKC-PLVMFTASG------GARMQE---------GI--LS 175 (284)
Q Consensus 114 ~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~-PlI~~~~SG------GaRMqE---------G~--~s 175 (284)
.+.-+|..|.+.-+|--=-.-++....-+.+..+++.+.+..- -+|++..+| |+.+.+ +- -.
T Consensus 44 ~~~~~~~~Vg~ItLNRP~~lNAl~~~m~~~l~~~l~~~~~d~~v~~vVl~g~G~kaFcAG~Dl~~l~~~~~~~~~~~~~~ 123 (407)
T 3ju1_A 44 LATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEV 123 (407)
T ss_dssp EECTTSCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHH
T ss_pred EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHCCCCCCCCCHHH
T ss_conf 72037984899998178867898999999999999999749895799998079997107818898851333333430158
Q ss_pred HHHHH-HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC------HHHHHHHHCCCCCCC--
Q ss_conf 77778-899999999862998899856764201111201468525553142110232------788787636778872--
Q gi|254780820|r 176 LMQLP-RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG------RRVIEQTVREKLPDG-- 246 (284)
Q Consensus 176 L~qMa-kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG------~rVi~~t~~~~lp~~-- 246 (284)
..... ........+..-..|+|+.+.+.|+||=. .+++.+|+.|+.+.+.+++.- |.|--...-..+|..
T Consensus 124 ~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~-~lal~~D~riate~a~f~~pe~~iGl~P~~G~s~~~~~~~~~~~ 202 (407)
T 3ju1_A 124 AKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGL-GLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKMG 202 (407)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHH-HHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSSTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCC-CCCCCCCCCCCCCCCEEECHHHCEEECCCCHHHHHHHHCCHHHH
T ss_conf 99999988899999985599389997670204552-00024564655898798323414542798115467462352888
Q ss_pred --------CHHHHHHHHCCCCCEEECHHHHHHHHHHHH
Q ss_conf --------021599996898353735899999999999
Q gi|254780820|r 247 --------FQRSEYLVEHGMIDRIVHRHDIPEVVSSLC 276 (284)
Q Consensus 247 --------fqtae~l~~~G~iD~iv~r~~l~~~i~~ll 276 (284)
.-+|+-.++.|++|.+|++.++......|.
T Consensus 203 ~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~~~~La 240 (407)
T 3ju1_A 203 LFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMA 240 (407)
T ss_dssp HHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHH
T ss_conf 89886589776578987497417538668999999999
No 69
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=97.08 E-value=0.026 Score=36.62 Aligned_cols=160 Identities=13% Similarity=0.201 Sum_probs=96.3
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCC-----CCCCCCCHH-----------HH----HHHH
Q ss_conf 99999833031853577899999999999986-289689997688-----877652124-----------67----7778
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASG-----GARMQEGIL-----------SL----MQLP 180 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SG-----GaRMqEG~~-----------sL----~qMa 180 (284)
|+...+|--=-.-+|+...-+.+..+++.+.+ ..+-+|+++.+| |+.+.+-.. .. .++-
T Consensus 14 V~~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (275)
T 1dci_A 14 VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLI 93 (275)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 89999838987899999999999999999975899679999678987416643888740113454210002567788889
Q ss_pred -HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCH-----------HHHHHHHC-CC----C
Q ss_conf -8999999998629988998567642011112014685255531421102327-----------88787636-77----8
Q gi|254780820|r 181 -RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGR-----------RVIEQTVR-EK----L 243 (284)
Q Consensus 181 -kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~-----------rVi~~t~~-~~----l 243 (284)
.....+..+..-..|.|+.+.+.|.||-. .++...|+.|+.+++.+++.-- ......++ .. +
T Consensus 94 ~~~~~~~~~i~~~~kPvIaav~G~a~GGG~-~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~~~~~l 172 (275)
T 1dci_A 94 SRYQKTFTVIEKCPKPVIAAIHGGCIGGGV-DLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNEL 172 (275)
T ss_dssp HHHHHHHHHHHHSSSCEEEEECSEEETHHH-HHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCEEEHHHH-HHHHCCCEEEECCCCCEECCCEEECCCCCCCCHHHHHHHHCCHHHHHHH
T ss_conf 999999999973899899998896230648-9875446511047872236321464564656277899985206665666
Q ss_pred --CCCCHHHHHHHHCCCCCEEECHHHH-HHHHHHHHHHHHCC
Q ss_conf --8720215999968983537358999-99999999997237
Q gi|254780820|r 244 --PDGFQRSEYLVEHGMIDRIVHRHDI-PEVVSSLCKILTKS 282 (284)
Q Consensus 244 --p~~fqtae~l~~~G~iD~iv~r~~l-~~~i~~ll~il~~~ 282 (284)
--+--+|+..++.|+||.|++..++ ......+..-+.+.
T Consensus 173 l~~g~~~~a~eA~~~Glv~~vv~~~~~~~~~~~~~~~~l~~~ 214 (275)
T 1dci_A 173 TFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSK 214 (275)
T ss_dssp HHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHS
T ss_pred HHCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 621566687788768953697185788779999999998706
No 70
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium 104}
Probab=97.03 E-value=0.029 Score=36.31 Aligned_cols=167 Identities=16% Similarity=0.229 Sum_probs=99.4
Q ss_pred CCEEEEEEEE-ECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----CCCCCCC-------H
Q ss_conf 7169998787-04149999983303185357789999999999998628-9689997688-----8776521-------2
Q gi|254780820|r 108 DSIVSAVGNV-RDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASG-----GARMQEG-------I 173 (284)
Q Consensus 108 davv~G~G~I-~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SG-----GaRMqEG-------~ 173 (284)
|.++.-.+.. .|-+|++..+|--=-.-+++...-+.+..+++.+.++. +-+|++..+| |+.+.|- .
T Consensus 6 ~~~~~~~~~~~~~G~Va~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~ 85 (267)
T 3oc7_A 6 DALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSS 85 (267)
T ss_dssp CSSEEEECHHHHSSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------C
T ss_pred CEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCH
T ss_conf 44344057788998789999738886799899999999999999965999559999788997748987798753244302
Q ss_pred --HHHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HH----
Q ss_conf --4677-77889999999986299889985676420111120146852555314211023278-----------87----
Q gi|254780820|r 174 --LSLM-QLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VI---- 235 (284)
Q Consensus 174 --~sL~-qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi---- 235 (284)
.... ........+.++.+-..|+|+.+.++|.||- +..++..|+.|+.+++.+++.-.+ ..
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~kPvIa~v~G~a~GgG-~~la~~~D~ria~~~a~f~~~~~~~Gl~p~~g~~~~~~~~~ 164 (267)
T 3oc7_A 86 AYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGG-FGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLS 164 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETTH-HHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCCC-HHHHHHCCCCEECCCCCEEHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 46778999999999999999779988999827661153-37765123011177543112530207787301889999988
Q ss_pred -----HH-HHCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf -----87-636778872021599996898353735899999999999997237
Q gi|254780820|r 236 -----EQ-TVREKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 236 -----~~-t~~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+- .+++.+ +++..++.|+||.+++ ++......+++-+.++
T Consensus 165 ~~~~~~llltg~~~-----~a~eA~~~Glv~~v~e--~~~~~a~~~a~~l~~~ 210 (267)
T 3oc7_A 165 ARAAARYYLTGEKF-----DARRAEEIGLITMAAE--DLDAAIDQLVTDVGRG 210 (267)
T ss_dssp HHHHHHHHHHCCCB-----CHHHHHHHTSSSEECS--SHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHCCCCC-----CHHHHHHCCCEEEECH--HHHHHHHHHHHHHCCC
T ss_conf 99999999858977-----8799998898588760--4433468888640247
No 71
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=97.01 E-value=0.03 Score=36.17 Aligned_cols=169 Identities=14% Similarity=0.164 Sum_probs=97.7
Q ss_pred EEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------------CCCCCCCHH---
Q ss_conf 99987870414999998330318535778999999999999862-89689997688------------877652124---
Q gi|254780820|r 111 VSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------------GARMQEGIL--- 174 (284)
Q Consensus 111 v~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------------GaRMqEG~~--- 174 (284)
++.+=.|++- |+...+|--=-.-+|....-+.+..+++.+.++ .+-+|++..++ |+.+.+-..
T Consensus 37 i~~~~~~ddg-Va~ItLNrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~~~~~~sgG~~FcaG~Dl~~~~~~~~ 115 (314)
T 1q52_A 37 ITYHRHVDDA-TVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGY 115 (314)
T ss_dssp EEEEEESSSS-EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC----------
T ss_pred EEEEEEEECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC
T ss_conf 6999973399-899995587756898999999999999999749997589995788766552102334767566531244
Q ss_pred ---H-----HHHHHH-----HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCC-EEECC----------
Q ss_conf ---6-----777788-----99999999862998899856764201111201468525553142-11023----------
Q gi|254780820|r 175 ---S-----LMQLPR-----TTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGA-EIGFA---------- 230 (284)
Q Consensus 175 ---s-----L~qMak-----t~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a-~igFa---------- 230 (284)
+ .....+ .......+..-..|+|+.+-+++.||-. ..+...|++|+.+.+ .+++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~-~lalacD~~ias~~a~~f~~pe~~lGl~p~~ 194 (314)
T 1q52_A 116 QYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH-SLHVVCDLTLASREYARFKQTDADVGSFDGG 194 (314)
T ss_dssp -------------------CHHHHHHHHHHSSSEEEEEECSEEETHHH-HHHHHSSEEEEETTTCEEECCGGGGTCCCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHH-HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 433334201266788888999999999985899889998376610213-8876123112100377766444045878885
Q ss_pred -C-HHHHHHHHCCC------CCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf -2-78878763677------8872021599996898353735899999999999997237
Q gi|254780820|r 231 -G-RRVIEQTVREK------LPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 231 -G-~rVi~~t~~~~------lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
| .+.. ..+|.. +--.--+|+..++.|+||.||+..++.+....+..-+.++
T Consensus 195 g~~~~L~-~~vG~~~A~~llltg~~i~a~eA~~~Glv~~vv~~~el~~~a~~~a~~i~~~ 253 (314)
T 1q52_A 195 YGSAYLA-RQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 253 (314)
T ss_dssp TTTHHHH-HHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTS
T ss_pred CHHHHHH-HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 0699999-9856999999998589888889730783279638789999999999999808
No 72
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.93 E-value=0.035 Score=35.72 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=99.3
Q ss_pred EEEEEEE-CHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCC-----CCCCCC-------HHHH-HHHHHHHHHH
Q ss_conf 9999983-30318535778999999999999862-896899976888-----776521-------2467-7778899999
Q gi|254780820|r 122 LVAVVHE-FSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGG-----ARMQEG-------ILSL-MQLPRTTIAI 186 (284)
Q Consensus 122 vvv~~~d-f~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGG-----aRMqEG-------~~sL-~qMakt~~a~ 186 (284)
|++..+| -.=-.-+++...-+.+..+++.+..+ .+-+|++...|+ +.+.|- ...+ .........+
T Consensus 17 Ia~itln~~p~~~Nal~~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (715)
T 1wdk_A 17 IVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIF 96 (715)
T ss_dssp EEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999898996677989999999999999997488976999988899716580989896355788678887678999999
Q ss_pred HHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCHH
Q ss_conf 999862998899856764201111201468525553142110232788-----------78763677------8872021
Q gi|254780820|r 187 NMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQR 249 (284)
Q Consensus 187 ~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fqt 249 (284)
.++.+...|.|+.+.++|.||= ...++..|+.|+.+++.+||.--++ ....+|.. +--..-+
T Consensus 97 ~~i~~~~~PvIAai~G~a~GgG-~elalacD~ria~~~a~f~~pev~lGl~p~~gg~~~l~r~iG~~~a~~l~ltg~~~~ 175 (715)
T 1wdk_A 97 SDFEDLNVPTVAAINGIALGGG-LEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENR 175 (715)
T ss_dssp HHHHTCSSCEEEEECSCEETHH-HHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHHCCCCEEEEECCHHHHHH-HHHHHHCCEEEEECCCEEECHHHHHCCCCCCCCCEECHHHCCHHHHHHHHCCCCCCH
T ss_conf 9998499989999786332999-999997899998299899886776388888774455101024367888630233404
Q ss_pred HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHC
Q ss_conf 59999689835373589999999999999723
Q gi|254780820|r 250 SEYLVEHGMIDRIVHRHDIPEVVSSLCKILTK 281 (284)
Q Consensus 250 ae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~ 281 (284)
++..++.|+||.||+..+|.+....++.-+.+
T Consensus 176 a~eA~~~Glvd~vv~~~~l~~~a~~~a~~~~~ 207 (715)
T 1wdk_A 176 AEDALKVSAVDAVVTADKLGAAALDLIKRAIS 207 (715)
T ss_dssp HHHHHHTTSSSEEECGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999859974248888999999999998702
No 73
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=96.93 E-value=0.03 Score=36.25 Aligned_cols=164 Identities=13% Similarity=0.181 Sum_probs=93.9
Q ss_pred EECEEEEEEEEECHHHC----------CCCCHHHHHHHHHHHHHHH-HH-CCCEEEEECCCC------CCCCC-------
Q ss_conf 70414999998330318----------5357789999999999998-62-896899976888------77652-------
Q gi|254780820|r 117 VRDFKLVAVVHEFSFIG----------GSIGIAAGEAIVKSCERAI-AE-KCPLVMFTASGG------ARMQE------- 171 (284)
Q Consensus 117 I~G~~vvv~~~df~F~G----------GSmG~~~geki~~a~e~A~-~~-~~PlI~~~~SGG------aRMqE------- 171 (284)
++|. |+...+|--=-+ -++....-+.+..+++... ++ .+=+|++...|+ +.+.|
T Consensus 27 ~~g~-VA~ItLnrPe~~g~~~~~~~KLNAls~~m~~EL~dAl~~l~~d~pdVrvVVLtGag~raFcAGaDL~e~~~~~~~ 105 (556)
T 2w3p_A 27 FNGP-VATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHA 105 (556)
T ss_dssp EETT-EEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHH
T ss_pred EECC-EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCHHHHHCCCCC
T ss_conf 8899-999998178755555567878588999999999999999982799848999980899916568488867425740
Q ss_pred CHHHHHHHH-HHHHHH-HHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEE--CCCEEECCC-------------HHH
Q ss_conf 124677778-899999-999862998899856764201111201468525553--142110232-------------788
Q gi|254780820|r 172 GILSLMQLP-RTTIAI-NMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAE--PGAEIGFAG-------------RRV 234 (284)
Q Consensus 172 G~~sL~qMa-kt~~a~-~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiae--p~a~igFaG-------------~rV 234 (284)
......+.. .+...+ ...+....|+|+.+.++|.||= ..++...|++|+- +++.+++.- +|+
T Consensus 106 ~~~~~~~~~~e~~~~~~~~~~~~~kPvIAAVnG~A~GGG-~eLALaCD~rIavad~~a~~~lPEv~~lGl~PG~ggt~R~ 184 (556)
T 2w3p_A 106 WKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGG-YELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRV 184 (556)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHH-HHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECC-CHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 156689999999999999998389989999758586612-0644065720304344420026421136778974342566
Q ss_pred HHH-HHCCC------CCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 787-63677------8872021599996898353735899999999999997237
Q gi|254780820|r 235 IEQ-TVREK------LPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 235 i~~-t~~~~------lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+.. .+|.. +-..--+|+-.++-|+||.||+..++-+....+..-+.++
T Consensus 185 ~l~r~VG~a~A~ellltGe~i~AeeA~~~GLVd~VVp~eeL~e~A~elA~~lA~~ 239 (556)
T 2w3p_A 185 TDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQ 239 (556)
T ss_dssp HHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCC
T ss_conf 6664512999999998299747999997697117728469999999999999769
No 74
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=96.87 E-value=0.0095 Score=39.91 Aligned_cols=82 Identities=21% Similarity=0.322 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC--CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEE-
Q ss_conf 3577899999999999986289--6899976888776521246777788999999998629988998567642011112-
Q gi|254780820|r 135 SIGIAAGEAIVKSCERAIAEKC--PLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTAS- 211 (284)
Q Consensus 135 SmG~~~geki~~a~e~A~~~~~--PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS- 211 (284)
+-|.+.++.+++.++.|.++.- -+|+-..|+|. ++.+--. +..++.++++++.|.++.+ |++.||
T Consensus 318 ~~~~~~~~~~~~~l~~a~~d~~vkavvLrInSpGG----s~~as~~---i~~~i~~~k~~~KPVv~~~-----~~~aASg 385 (593)
T 3bf0_A 318 TQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGG----SVTASEV---IRAELAAARAAGKPVVVSM-----GGMAASG 385 (593)
T ss_dssp CTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEE----CHHHHHH---HHHHHHHHHHTTCCEEEEE-----EEEEETH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCC----CHHHHHH---HHHHHHHHHHCCCCEEEEE-----CCCCCHH
T ss_conf 67876617889999866507542179999979898----5778999---9999999985499789998-----7866415
Q ss_pred ---ECCCCCEEEEECCCEEE
Q ss_conf ---01468525553142110
Q gi|254780820|r 212 ---YAMLGDIHLAEPGAEIG 228 (284)
Q Consensus 212 ---~a~lgDiiiaep~a~ig 228 (284)
.|+-+|-|+|.|.+.+|
T Consensus 386 gY~ia~~ad~I~A~p~titG 405 (593)
T 3bf0_A 386 GYWISTPANYIVANPSTLTG 405 (593)
T ss_dssp HHHTTTTCSEEEECTTCEEE
T ss_pred HHHHHHCCCEEEECCCCEEE
T ss_conf 55765336747866865144
No 75
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=96.81 E-value=0.043 Score=35.05 Aligned_cols=143 Identities=12% Similarity=0.090 Sum_probs=87.4
Q ss_pred EEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECC-----CCCCCCCCHH---------------
Q ss_conf 87041499999833031853577899999999999986-28968999768-----8877652124---------------
Q gi|254780820|r 116 NVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTAS-----GGARMQEGIL--------------- 174 (284)
Q Consensus 116 ~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~S-----GGaRMqEG~~--------------- 174 (284)
.++| .|.+..+|--=-.-++....-..+..+++.+.+ ..+=+|++..+ .|+.+.+-..
T Consensus 14 ~~~~-~v~~ItlnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 92 (280)
T 1pjh_A 14 RIEG-PFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSK 92 (280)
T ss_dssp EEET-TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHH
T ss_pred EEEC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCCCCCCCCHHHHH
T ss_conf 9989-999999768887789899999999999999974999769999669987438872688872234542111013478
Q ss_pred HHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEE-ECCCEEECC----------C-----HHHH--
Q ss_conf 677-77889999999986299889985676420111120146852555-314211023----------2-----7887--
Q gi|254780820|r 175 SLM-QLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLA-EPGAEIGFA----------G-----RRVI-- 235 (284)
Q Consensus 175 sL~-qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiia-ep~a~igFa----------G-----~rVi-- 235 (284)
... .+.+....+..+.+-..|+|+.+.++|.||=. -.|+..|+.|| ++.+.+++. | ||.+
T Consensus 93 ~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~-~lal~~D~ria~~d~~~~~~pe~~~Gl~p~~g~~~~l~~~vG~ 171 (280)
T 1pjh_A 93 WVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSA-ALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGT 171 (280)
T ss_dssp HHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHH-HHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECCCCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 999999999999999996899989997781014664-2332210577644423423620167838873232114777359
Q ss_pred ---HHH--HCCCCCCCCHHHHHHHHCCCCCEEECH
Q ss_conf ---876--367788720215999968983537358
Q gi|254780820|r 236 ---EQT--VREKLPDGFQRSEYLVEHGMIDRIVHR 265 (284)
Q Consensus 236 ---~~t--~~~~lp~~fqtae~l~~~G~iD~iv~r 265 (284)
.+- +++.+ +|+..++.|+||.||+.
T Consensus 172 ~~a~~llltg~~~-----~a~eA~~~Glv~~vv~~ 201 (280)
T 1pjh_A 172 NTTYECLMFNKPF-----KYDIMCENGFISKNFNM 201 (280)
T ss_dssp HHHHHHHHTTCCE-----EHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHCCCCC-----CHHHHHHCCCEEEEECC
T ss_conf 9999999839957-----79999987994487487
No 76
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=96.81 E-value=0.044 Score=35.02 Aligned_cols=152 Identities=13% Similarity=0.144 Sum_probs=92.7
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECC--------------CCCCCC---CCHHHHH--HHHH
Q ss_conf 99999833031853577899999999999986-28968999768--------------887765---2124677--7788
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTAS--------------GGARMQ---EGILSLM--QLPR 181 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~S--------------GGaRMq---EG~~sL~--qMak 181 (284)
|+...+|--=-.-+++...-+-+..+++.+.. ..+-+|++... .|+.+. ++..+.. .+.+
T Consensus 177 Va~ITLNRPek~NAls~~m~~eL~~al~~~~~D~~VrvVVLtGa~~~~~~~~gGr~FcAG~DL~el~~~~~~~~~~~~~~ 256 (440)
T 2np9_A 177 VARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRR 256 (440)
T ss_dssp EEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCHHHHHH
T ss_conf 99999758887789999999999999999962999649999688866665788887754819998861677642156665
Q ss_pred HHHHHHHH----------------HHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------
Q ss_conf 99999999----------------862998899856764201111201468525553142110232788-----------
Q gi|254780820|r 182 TTIAINML----------------KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV----------- 234 (284)
Q Consensus 182 t~~a~~~l----------------~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV----------- 234 (284)
....+.++ .+...|+|+.+.++|.||= ..+++..|+.|+.+++.+++.-.++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KPvIAaVnG~A~GGG-~eLalacD~rIAae~A~F~lPe~~lGi~Pg~gs~~L 335 (440)
T 2np9_A 257 ELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGG-AQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANLRL 335 (440)
T ss_dssp HHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHH-HHHGGGCSEEEEETTCEEECCCTTTCCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCC-CEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHH
T ss_conf 4567889998876554679999998489988999668456176-501237550200301302586544512887028799
Q ss_pred --------HHHH--HCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHH
Q ss_conf --------7876--36778872021599996898353735899999999999997
Q gi|254780820|r 235 --------IEQT--VREKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKIL 279 (284)
Q Consensus 235 --------i~~t--~~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il 279 (284)
..+. +|+.+ +|+..++.|+||.||+..++...+..++.-+
T Consensus 336 ~r~vG~~~A~ellLtG~~i-----sA~EA~~~GLV~eVVp~deL~~~a~~~a~~l 385 (440)
T 2np9_A 336 GRFAGPRVSRQVILEGRRI-----WAKEPEARLLVDEVVEPDELDAAIERSLTRL 385 (440)
T ss_dssp HHHHHHHHHHHHHHHCCCE-----ETTSGGGGGTCSEEECHHHHHHHHHHHHHTT
T ss_pred HHHHCHHHHHHHHHCCCCC-----CHHHHHHCCCCEEECCHHHHHHHHHHHHHHC
T ss_conf 9985999999999749917-----7999997698507768589999999999862
No 77
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=96.79 E-value=0.018 Score=37.82 Aligned_cols=159 Identities=16% Similarity=0.228 Sum_probs=96.9
Q ss_pred EEEEEEEEECEEEEEE---EEECHHHCCCCC---HHHHHHHHHHHHHHHHH-CCCEEEEE-CC-CCCCCCCCHHHHHHHH
Q ss_conf 6999878704149999---983303185357---78999999999999862-89689997-68-8877652124677778
Q gi|254780820|r 110 IVSAVGNVRDFKLVAV---VHEFSFIGGSIG---IAAGEAIVKSCERAIAE-KCPLVMFT-AS-GGARMQEGILSLMQLP 180 (284)
Q Consensus 110 vv~G~G~I~G~~vvv~---~~df~F~GGSmG---~~~geki~~a~e~A~~~-~~PlI~~~-~S-GGaRMqEG~~sL~qMa 180 (284)
++--.|.|-..+...- .....++|++-. ...=.-++++++.|.+. ++--|.+- .| +| .++.++.
T Consensus 35 ~l~l~G~ive~~~~~~p~~~~~~~~~g~~~~~~~~~~l~div~~i~~Aa~D~~IkgIvL~~~~~~g-------g~~a~~~ 107 (593)
T 3bf0_A 35 LLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAG-------GDQPSMQ 107 (593)
T ss_dssp EECCEEEEESCC--------------------CCEEEHHHHHHHHHHHHHCTTCCCEEEECTEEEE-------CCHHHHH
T ss_pred EEECCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC-------CCHHHHH
T ss_conf 994771685368888828888787516887754444499999999998349995089998069888-------7389999
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHH-------------------------
Q ss_conf 8999999998629988998567642011112014685255531421102327887-------------------------
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVI------------------------- 235 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi------------------------- 235 (284)
.+..|+.+++++|-|.++...+.+.++- -.|+.+|-|++.|.+.+++-|...-
T Consensus 108 ei~~al~~fk~sgKpVvA~~~~~~~~~Y--~LAS~AD~I~~~p~g~v~~~G~~~~~~~~k~~LdKlGI~~~v~~~G~yKs 185 (593)
T 3bf0_A 108 YIGKALKEFRDSGKPVYAVGENYSQGQY--YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKS 185 (593)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCEEHHHH--HHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCG
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHH--HHHHHCCEEEECCCCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCC
T ss_conf 9999999999709929999615521323--74643898998899668887038862567789997598069996156456
Q ss_pred --HHHHC-----------------------------CCCC-C----------------CCHHHHHHHHCCCCCEEECHHH
Q ss_conf --87636-----------------------------7788-7----------------2021599996898353735899
Q gi|254780820|r 236 --EQTVR-----------------------------EKLP-D----------------GFQRSEYLVEHGMIDRIVHRHD 267 (284)
Q Consensus 236 --~~t~~-----------------------------~~lp-~----------------~fqtae~l~~~G~iD~iv~r~~ 267 (284)
|.-++ -.++ + +..+++..++.|+||.+..+.|
T Consensus 186 a~epf~~~~mS~e~re~~~~ll~~l~~~f~~~Va~~R~l~~~~v~~~~~~~~~~l~~~~~~~a~~Al~~gLVD~l~~~de 265 (593)
T 3bf0_A 186 AVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAE 265 (593)
T ss_dssp GGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
T ss_conf 67866667899999999999999999999999988627883112234556888877607614999998655420012566
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780820|r 268 IPEVVSSLCK 277 (284)
Q Consensus 268 l~~~i~~ll~ 277 (284)
+++.+...+.
T Consensus 266 ~~~~l~~~~g 275 (593)
T 3bf0_A 266 IEKALTKEFG 275 (593)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
T ss_conf 7777787508
No 78
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=96.73 E-value=0.01 Score=39.62 Aligned_cols=158 Identities=11% Similarity=0.027 Sum_probs=94.1
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCHHHHHHHHHH------------H-HHHH
Q ss_conf 999998330318535778999999999999862-8968999768887765212467777889------------9-9999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASGGARMQEGILSLMQLPRT------------T-IAIN 187 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SGGaRMqEG~~sL~qMakt------------~-~a~~ 187 (284)
|.+.-+|--=-.-+++...-+-+..+++.+.+. .+-+|++..+|+.=-..+- |-.|..- . ....
T Consensus 22 v~~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~~~~vvl~g~g~~FsaG~D--l~~~~~~~~~~~~~~~~~~~~~~~~ 99 (258)
T 3lao_A 22 LFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLD--LMELAPKLAASGFRYPDGGVDPWGV 99 (258)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBC--HHHHGGGCBTTBCCCCTTCCCTTSC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC--HHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999768987789899999999999999973999659999779986615874--6652533303567766533348999
Q ss_pred HHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCC---------------HHHHHHHHCCC--CCCCCHHH
Q ss_conf 99862998899856764201111201468525553142110232---------------78878763677--88720215
Q gi|254780820|r 188 MLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAG---------------RRVIEQTVREK--LPDGFQRS 250 (284)
Q Consensus 188 ~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG---------------~rVi~~t~~~~--lp~~fqta 250 (284)
.+..-..|.|+.+.+++.||= +.++...|+.|+.+++.++|.. ||.|-...-.+ +.-.--+|
T Consensus 100 ~~~~~~kPvIa~v~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~r~ig~~~a~~l~ltg~~~~a 178 (258)
T 3lao_A 100 VQPRRSKPLVVAVQGTCWTAG-IELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDA 178 (258)
T ss_dssp SSSCCCSCEEEEECSEEETHH-HHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEH
T ss_pred HHHHCCCCEEEEEECEEECCC-CHHHHCCCHHHHHHCCEEECHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCH
T ss_conf 987389988999818260376-4431033522130136771643300788420068888888467899988412880569
Q ss_pred HHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf 99996898353735899999999999997237
Q gi|254780820|r 251 EYLVEHGMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 251 e~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
+..++.|+||.||+..++.+....+..-+.++
T Consensus 179 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~ 210 (258)
T 3lao_A 179 DEALRMRLLTEVVEPGEELARALEYAERIARA 210 (258)
T ss_dssp HHHHHTTSCSEEECTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHCCCEEEEECCCHHHHHHHHHHHHHHHC
T ss_conf 99977799208848208999999999987625
No 79
>2x58_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, lyase, isomerase, peroxisome; HET: ADP COA; 2.80A {Rattus norvegicus}
Probab=96.60 E-value=0.06 Score=34.01 Aligned_cols=155 Identities=10% Similarity=0.159 Sum_probs=92.7
Q ss_pred EEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 78704149999983303185357789999999999998628-9689997688-----87765212467777889999999
Q gi|254780820|r 115 GNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEK-CPLVMFTASG-----GARMQEGILSLMQLPRTTIAINM 188 (284)
Q Consensus 115 G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~-~PlI~~~~SG-----GaRMqEG~~sL~qMakt~~a~~~ 188 (284)
-+|++.=.++-..+.. --+++...-+.+..+++.+.++. +=+|+++.+| |+.+.| ..++..-.....-+++
T Consensus 10 ~~~~~~ia~itln~P~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vvltg~g~~F~aG~Dl~~-~~~~~~~~~~~~~~~~ 86 (727)
T 2x58_A 10 LRLPHSLAMIRLCNPP--VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHG-FSAFTPGLALGSLVDE 86 (727)
T ss_dssp EECGGGEEEEEECCTT--TTCBCHHHHHHHHHHHHHHHSCTTCCEEEEEESTTCSBCCBCGGG-CSSSCSCSHHHHHHHH
T ss_pred EEEECCEEEEEECCCC--CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH-HHCCCCHHHHHHHHHH
T ss_conf 9986998999978886--478999999999999999864899769999898997556808575-6535905799999999
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHH-----------HHHHHHCCC------CCCCCHHHH
Q ss_conf 986299889985676420111120146852555314211023278-----------878763677------887202159
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRR-----------VIEQTVREK------LPDGFQRSE 251 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~r-----------Vi~~t~~~~------lp~~fqtae 251 (284)
+.+...|+|+.+.+.|.||=. .+|+..|+.|+.+++.+|+.--+ .....+|.. +.-..-+++
T Consensus 87 i~~~~kPvIaav~G~a~GgG~-elalacD~ria~~~a~~g~pev~lGl~p~~ggt~~l~r~iG~~~a~~l~l~g~~~~a~ 165 (727)
T 2x58_A 87 IQRYQKPVLAAIQGVALGGGL-ELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSAD 165 (727)
T ss_dssp HHTCSSCEEEEECSEEETHHH-HHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCEEEHH
T ss_pred HHHCCCCEEEEECCHHHHHHH-HHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHH
T ss_conf 994999899998845329999-9999659899759979988300516188616999998852577899987537878789
Q ss_pred HHHHCCCCCEEECHHHHHHHHH
Q ss_conf 9996898353735899999999
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVS 273 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~ 273 (284)
..++.|+||.|++..++...+.
T Consensus 166 ~A~~~Glvd~v~~~~~~~~a~~ 187 (727)
T 2x58_A 166 EALRLGILDAVVKSDPVEEAIK 187 (727)
T ss_dssp HHHTTTSCSEEESSCHHHHHHH
T ss_pred HHHHCCCCCEECCCHHHHHHHH
T ss_conf 9986599717647500799999
No 80
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabolism, lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus HTA426}
Probab=96.51 E-value=0.067 Score=33.62 Aligned_cols=155 Identities=14% Similarity=0.190 Sum_probs=93.8
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC------CCCCCCC---HHH--HHHHHHHHHHHHHH
Q ss_conf 999998330318535778999999999999862-89689997688------8776521---246--77778899999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG------GARMQEG---ILS--LMQLPRTTIAINML 189 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG------GaRMqEG---~~s--L~qMakt~~a~~~l 189 (284)
|....+|-.= --++....-+.+..+++.+.++ .+-+|++..+| |+.+.|- ..+ ...+......+.++
T Consensus 19 v~~itln~pk-~Nal~~~m~~~l~~~l~~~~~d~~vr~vil~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i 97 (265)
T 2ppy_A 19 IAEIHLHINK-SNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKI 97 (265)
T ss_dssp EEEEEECSST-TCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999989899-899999999999999999984999659999617896056785210210100567889999888999998
Q ss_pred HHCCCCEEEEECCCCCCEEEEEECCCCCEEEE-ECCC-------EEECCCH--------HHHHHH-------HCCCCCCC
Q ss_conf 86299889985676420111120146852555-3142-------1102327--------887876-------36778872
Q gi|254780820|r 190 KDAGLPYIVVLTNPTTGGVTASYAMLGDIHLA-EPGA-------EIGFAGR--------RVIEQT-------VREKLPDG 246 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiia-ep~a-------~igFaG~--------rVi~~t-------~~~~lp~~ 246 (284)
.....|+|+.+.+++.||= +.++...|++++ ...+ .+|+..+ |.+-.. +++.+
T Consensus 98 ~~~~kpvIaav~G~a~GgG-~~lal~~D~ri~~~~~a~~~~pe~~~Gl~p~~~~~~~l~r~vG~~~a~~l~ltg~~~--- 173 (265)
T 2ppy_A 98 ARSPQVYIACLEGHTVGGG-LEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETI--- 173 (265)
T ss_dssp HHSSSEEEEEECSEEETHH-HHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCB---
T ss_pred HHCCCCEEEEECCEECCCC-CEEECCCCEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHCHHHHHHHHHCCCCC---
T ss_conf 6089878999817233686-344102426899515423447203567788856899999985899999999759977---
Q ss_pred CHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 0215999968983537358999999999999972378
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTKSV 283 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~~~ 283 (284)
+|+..++-|+||.|++..++.+....+..-+.+++
T Consensus 174 --~a~eA~~~Glv~~v~~~~~~~~~~~~~a~~~~~~~ 208 (265)
T 2ppy_A 174 --TPQEALEIGLVNRVFPQAETRERTREYARKLANSA 208 (265)
T ss_dssp --CHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC
T ss_pred --CHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCC
T ss_conf --89999986992463482899999999999997279
No 81
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=96.42 E-value=0.0055 Score=41.65 Aligned_cols=92 Identities=21% Similarity=0.248 Sum_probs=63.0
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCCCHHHH
Q ss_conf 9862998899856764201111201468525553142110232788-----------78763677------887202159
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDGFQRSE 251 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~fqtae 251 (284)
+.....|+|+.+.+++.||- ...+...|++|+.+++.+++.--++ ..+.+|.. +--..-+|+
T Consensus 136 ~~~~~kP~IAav~G~a~GgG-~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~ 214 (305)
T 3m6n_A 136 GLGARAHSIALVQGNALGGG-FEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAE 214 (305)
T ss_dssp GGGTTCEEEEEECSCEETHH-HHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEEHH
T ss_pred HHCCCCCEEEEECCCEEHHH-HHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHH
T ss_conf 75699989999887050899-99999854770534431357043058898853589999860699999999658999899
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHC
Q ss_conf 999689835373589999999999999723
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILTK 281 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~~ 281 (284)
..++.|+||.||+..++.+....+.+++.+
T Consensus 215 eA~~~Glv~~vv~~~~l~~~~~~~a~~~~~ 244 (305)
T 3m6n_A 215 QLLGMGLVDRVVPRGQGVAAVEQVIRESKR 244 (305)
T ss_dssp HHHHHTSCSEEECTTCHHHHHHHHHHHHTT
T ss_pred HHHHCCCCEEEECHHHHHHHHHHHHHHHCC
T ss_conf 998779930871856999999999999748
No 82
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.89 E-value=0.039 Score=35.40 Aligned_cols=160 Identities=14% Similarity=0.154 Sum_probs=94.6
Q ss_pred CEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHH-CCCEEEEECCC-----CCCCCCCHHHHH--------HHH-HHH
Q ss_conf 414999998330318535778999999999999862-89689997688-----877652124677--------778-899
Q gi|254780820|r 119 DFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAE-KCPLVMFTASG-----GARMQEGILSLM--------QLP-RTT 183 (284)
Q Consensus 119 G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~-~~PlI~~~~SG-----GaRMqEG~~sL~--------qMa-kt~ 183 (284)
+--|++..+|--= --+++...-+.+..+++.+.++ .+-+|+++..| |+.+.|= ..+. +.. ...
T Consensus 15 ~DgIa~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~-~~~~~~~~~~~~~~~~~~~ 92 (725)
T 2wtb_A 15 GDGVAVITLINPP-VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGF-GEMQKGNVKEPKAGYISID 92 (725)
T ss_dssp TTSEEEEEEECTT-TTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEESSSCCBCSSCC-------------CCSSSHHHHH
T ss_pred CCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHH-HHCCCCCHHHHHHHHHHHH
T ss_conf 9938999977857-4779999999999999999658997699998889980307374747-5234677667888888999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHH-----------HHHHHCCC------CCCC
Q ss_conf 999999862998899856764201111201468525553142110232788-----------78763677------8872
Q gi|254780820|r 184 IAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRV-----------IEQTVREK------LPDG 246 (284)
Q Consensus 184 ~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rV-----------i~~t~~~~------lp~~ 246 (284)
..+.++.....|+|+.+.+.|.||= ..+++.+|++|+.++|.+||.--++ ....+|.. +.-.
T Consensus 93 ~~~~~i~~~~kPvIAav~G~a~GGG-~elalacD~ria~~~a~fg~PEv~lGl~P~~gg~~~L~r~iG~~~A~~l~ltg~ 171 (725)
T 2wtb_A 93 IITDLLEAARKPSVAAIDGLALGGG-LELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSK 171 (725)
T ss_dssp CCCCCCCTSSSCEEEEECSEEETHH-HHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCEEEEECCEEEHHH-HHHHHHCCEEEEECCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999998199989999887350899-999996898997199799880353084787114578888745788999987267
Q ss_pred CHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHC
Q ss_conf 02159999689835373589999999999999723
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDIPEVVSSLCKILTK 281 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l~~~i~~ll~il~~ 281 (284)
.-+++..++.|++|.||+..++-+.-..+..-+.+
T Consensus 172 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~ 206 (725)
T 2wtb_A 172 PVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVG 206 (725)
T ss_dssp CEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
T ss_conf 75456653055402432531589999999998764
No 83
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 2.00A {Acinetobacter baumannii atcc 17978}
Probab=95.84 E-value=0.14 Score=31.27 Aligned_cols=147 Identities=10% Similarity=0.088 Sum_probs=87.4
Q ss_pred EEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCHHH-HHH-----------HHHHHHHHHH
Q ss_conf 99999833031853577899999999999986-2896899976888776521246-777-----------7889999999
Q gi|254780820|r 122 LVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGGARMQEGILS-LMQ-----------LPRTTIAINM 188 (284)
Q Consensus 122 vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGGaRMqEG~~s-L~q-----------Makt~~a~~~ 188 (284)
|+..-+|--=-.-+|+...-+.+..+++.+.+ ..+-+|++..+|+.=--.+-+. +.. .......+.+
T Consensus 15 v~~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (266)
T 3fdu_A 15 VLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKS 94 (266)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999758675789999999999999999975899469999789842515731666542001310344443258999999
Q ss_pred HHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC-----------CHHHHHHHHCCC------CCCCCHHHH
Q ss_conf 986299889985676420111120146852555314211023-----------278878763677------887202159
Q gi|254780820|r 189 LKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFA-----------GRRVIEQTVREK------LPDGFQRSE 251 (284)
Q Consensus 189 l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFa-----------G~rVi~~t~~~~------lp~~fqtae 251 (284)
+.....|.|+.+.++|.||- ..++...|+.||.+.|.+++. |-......+|.. +--.--+|+
T Consensus 95 i~~~~kPvIaav~G~a~GgG-~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~ 173 (266)
T 3fdu_A 95 AARLSKPLIIAVKGVAIGIG-VTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAE 173 (266)
T ss_dssp HHHCCSCEEEEECSEEETHH-HHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHH
T ss_pred HHHCCCCEEEEECCEEEECC-CEEECCCCCCEECCCCEEECCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEECHH
T ss_conf 99779987998638474645-23221523111147978978625328882110789999995502653211058562288
Q ss_pred HHHHCCCCCEEECHHHHH
Q ss_conf 999689835373589999
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIP 269 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~ 269 (284)
..++.|+||.||+..+..
T Consensus 174 eA~~~Glv~~vv~~~~~~ 191 (266)
T 3fdu_A 174 TALQAGLVNEIVEDAYAT 191 (266)
T ss_dssp HHHHTTSCSEECSCHHHH
T ss_pred HHHHCCCEEEECCCHHHH
T ss_conf 897789722777848999
No 84
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 1yg8_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A*
Probab=91.02 E-value=0.81 Score=25.63 Aligned_cols=121 Identities=20% Similarity=0.280 Sum_probs=67.0
Q ss_pred HHCCCCCHHHHHHHHHH-HHHHHH-HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 31853577899999999-999986-2896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKS-CERAIA-EKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a-~e~A~~-~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|++|.+....++.++.- .-+..+ ..-|+-++..|-|.- +.+-+ +.++.++..+.|+.++.. |.
T Consensus 30 fl~~~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InSpGG~----v~~gl------~i~D~i~~~~~~V~Tv~~-----G~ 94 (193)
T 1yg6_A 30 FLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGV----ITAGM------SIYDTMQFIKPDVSTICM-----GQ 94 (193)
T ss_dssp EEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBC----HHHHH------HHHHHHHHSSSCEEEEEE-----EE
T ss_pred EECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC----HHHHH------HHHHHHHHCCCCEEEEEE-----HH
T ss_conf 8898864688999999999998049999979999789962----75799------999998427999999982-----49
Q ss_pred EEEEC----CCCC--EEEEECCCEE-------ECCCHHH-HH------------------HHHC-------CCCC-CCCH
Q ss_conf 11201----4685--2555314211-------0232788-78------------------7636-------7788-7202
Q gi|254780820|r 209 TASYA----MLGD--IHLAEPGAEI-------GFAGRRV-IE------------------QTVR-------EKLP-DGFQ 248 (284)
Q Consensus 209 ~AS~a----~lgD--iiiaep~a~i-------gFaG~rV-i~------------------~t~~-------~~lp-~~fq 248 (284)
.||-| +.|+ --.+-|.|.+ |+.|+.. ++ +-+| +++. +-|-
T Consensus 95 aaS~a~lIl~~G~~g~R~~~pns~iMiHq~s~~~~G~~~di~~~~~el~~~~~~i~~i~a~~tg~~~~~i~~~~~rd~~l 174 (193)
T 1yg6_A 95 AASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 174 (193)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEE
T ss_pred HHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 99899999975999974576653776225664657549999999999999999999999999793999999872478337
Q ss_pred HHHHHHHCCCCCEEECHH
Q ss_conf 159999689835373589
Q gi|254780820|r 249 RSEYLVEHGMIDRIVHRH 266 (284)
Q Consensus 249 tae~l~~~G~iD~iv~r~ 266 (284)
+|+..++.|+||.|++.+
T Consensus 175 ~a~EAl~~GiiD~Ii~~~ 192 (193)
T 1yg6_A 175 SAPEAVEYGLVDSILTHR 192 (193)
T ss_dssp EHHHHHHHTSSSEECCCC
T ss_pred CHHHHHHCCCCCEEECCC
T ss_conf 799999809985893569
No 85
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopeptidase, ATP-dependent protease, hydrolase; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=90.99 E-value=0.22 Score=29.87 Aligned_cols=125 Identities=18% Similarity=0.242 Sum_probs=73.7
Q ss_pred HHCCCCCHHHHHHHHHHHHH--HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 31853577899999999999--9862896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCER--AIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e~--A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|++|-+...+++.++.-+-+ +.....|+-++..|.|--+..|. +-++.++..+.|..++.. |.
T Consensus 31 fl~~~Id~~~a~~ii~~L~~L~~~~~~k~I~l~InS~GG~v~~gl----------aI~d~i~~~~~~V~ti~~-----G~ 95 (208)
T 2cby_A 31 FLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGM----------AIYDTMVLAPCDIATYAM-----GM 95 (208)
T ss_dssp EECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHH----------HHHHHHHHCSSCEEEEEE-----EE
T ss_pred EECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH----------HHHHHHHHCCCCEEEEEC-----CC
T ss_conf 989836789999999999997451889980788679988787899----------999999865998799963-----63
Q ss_pred EEEEC----CCCC--EEEEECCCEEE-------CCCHH---------------HH----HHHHC-------CCC-CCCCH
Q ss_conf 11201----4685--25553142110-------23278---------------87----87636-------778-87202
Q gi|254780820|r 209 TASYA----MLGD--IHLAEPGAEIG-------FAGRR---------------VI----EQTVR-------EKL-PDGFQ 248 (284)
Q Consensus 209 ~AS~a----~lgD--iiiaep~a~ig-------FaG~r---------------Vi----~~t~~-------~~l-p~~fq 248 (284)
+||-| +-|+ --++-|+|.+. +.|.. .+ .+-+| +++ -+-|-
T Consensus 96 aaS~aslIl~aG~kg~R~~~pns~iMiHq~~~~~~G~~~di~~~a~el~~~~~~i~~iya~~Tg~~~e~I~~~~~rd~~l 175 (208)
T 2cby_A 96 AASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWF 175 (208)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 54389999867898956887986278888873667777689999999999999999999999795999999860688434
Q ss_pred HHHHHHHCCCCCEEECHHHHHH
Q ss_conf 1599996898353735899999
Q gi|254780820|r 249 RSEYLVEHGMIDRIVHRHDIPE 270 (284)
Q Consensus 249 tae~l~~~G~iD~iv~r~~l~~ 270 (284)
+|+-.++.|+||.|+.+.++..
T Consensus 176 sa~EAl~yGliD~Ii~~~~~~~ 197 (208)
T 2cby_A 176 TAAEALEYGFVDHIITRAHVNG 197 (208)
T ss_dssp EHHHHHHHTSCSEECSCC----
T ss_pred CHHHHHHCCCCCEEECCCCCCC
T ss_conf 5999998499879835798996
No 86
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp}
Probab=90.19 E-value=0.52 Score=27.06 Aligned_cols=123 Identities=18% Similarity=0.304 Sum_probs=71.1
Q ss_pred HHCCCCCHHHHHHHHHHHHHHH-H-HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 3185357789999999999998-6-2896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCERAI-A-EKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e~A~-~-~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|++|-+...+++.++.-+.+.. + ..-|+-++..|-|.-+.+|.. -++.++..+.|+.++.. |.
T Consensus 34 ~l~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~INSpGG~v~~g~a----------i~d~i~~~~~~V~Tv~~-----G~ 98 (201)
T 3p2l_A 34 FLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMG----------VYDTMQFIKPDVSTICI-----GL 98 (201)
T ss_dssp EEESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHH----------HHHHHHHSSSCEEEEEE-----EE
T ss_pred EECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH----------HHHHHHHCCCCEEEEEE-----CC
T ss_conf 9898686899999999999987336889869998189987889999----------99999847999899994-----52
Q ss_pred EEEEC----CCC--CEEEEECCCEE-------ECCCHHH-H------------------HHHHC-------CCCC-CCCH
Q ss_conf 11201----468--52555314211-------0232788-7------------------87636-------7788-7202
Q gi|254780820|r 209 TASYA----MLG--DIHLAEPGAEI-------GFAGRRV-I------------------EQTVR-------EKLP-DGFQ 248 (284)
Q Consensus 209 ~AS~a----~lg--Diiiaep~a~i-------gFaG~rV-i------------------~~t~~-------~~lp-~~fq 248 (284)
.||-| +-| +--.+-|.|.+ ++.|+.. + .+.+| +++- +-|-
T Consensus 99 aaS~a~lil~aG~k~~R~~~pns~iMiHq~~~~~~G~~~di~~~~~el~~~~~~i~~i~a~~tg~~~~~i~~~~~rd~~l 178 (201)
T 3p2l_A 99 AASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFM 178 (201)
T ss_dssp EETHHHHHHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEE
T ss_pred HHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 87679999967998868757470467715677888579999999999999999999999999795999999861478435
Q ss_pred HHHHHHHCCCCCEEEC-HHHH
Q ss_conf 1599996898353735-8999
Q gi|254780820|r 249 RSEYLVEHGMIDRIVH-RHDI 268 (284)
Q Consensus 249 tae~l~~~G~iD~iv~-r~~l 268 (284)
+|+-.++.|+||.|++ |+++
T Consensus 179 ta~EAleyGliD~Ii~~~~~~ 199 (201)
T 3p2l_A 179 MADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp EHHHHHHHTSCSEECCCSCC-
T ss_pred CHHHHHHCCCCCEEECCCHHH
T ss_conf 799999849984970555100
No 87
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=89.47 E-value=0.09 Score=32.71 Aligned_cols=37 Identities=5% Similarity=0.066 Sum_probs=29.0
Q ss_pred CCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHH
Q ss_conf 46010566768722178898633838899896243799
Q gi|254780820|r 23 ENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAK 60 (284)
Q Consensus 23 ~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~ar 60 (284)
+..+.-||+|+..+.... ..+..+||.|++.|=..-+
T Consensus 22 ~~~~~~CP~C~~~~~~~~-~~~~~~C~~C~~~fC~~C~ 58 (86)
T 2ct7_A 22 DPKFLWCAQCSFGFIYER-EQLEATCPQCHQTFCVRCK 58 (86)
T ss_dssp CCCEECCSSSCCCEECCC-SCSCEECTTTCCEECSSSC
T ss_pred CCCCCCCCCCCCEEEECC-CCCEEEECCCCCEECCCCC
T ss_conf 889749989994488679-9998884999994561409
No 88
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=89.29 E-value=0.034 Score=35.79 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=21.4
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEE
Q ss_conf 1056676872217889863383889989624
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~r 56 (284)
--.||+|++..-.. ...++|||.|+|-..
T Consensus 27 lP~CP~C~seytY~--dg~~~vCPeC~hEW~ 55 (138)
T 2akl_A 27 LPPCPQCNSEYTYE--DGALLVCPECAHEWS 55 (138)
T ss_dssp SCCCTTTCCCCCEE--CSSSEEETTTTEEEC
T ss_pred CCCCCCCCCCCEEC--CCCEEECCCCCCCCC
T ss_conf 98898889902373--799888987637378
No 89
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 1nwy_Z* 1nwx_Z* 1xbp_Z* 1pnu_Z ...
Probab=88.32 E-value=0.27 Score=29.20 Aligned_cols=23 Identities=9% Similarity=0.356 Sum_probs=18.9
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 10566768722178898633838899896
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
-+.||+||+... -..|||+|||+
T Consensus 30 l~~C~~cG~~~~------~H~vc~~CG~Y 52 (60)
T 2zjr_Z 30 LTECPQCHGKKL------SHHICPNCGYY 52 (60)
T ss_dssp CEECTTTCCEEC------TTBCCTTTCBS
T ss_pred EEECCCCCCCCC------CCEECCCCCCC
T ss_conf 168899998636------72677989809
No 90
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=87.80 E-value=0.87 Score=25.41 Aligned_cols=120 Identities=14% Similarity=0.232 Sum_probs=64.2
Q ss_pred HHCCCCCHHHHHHHHHHHH-HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE
Q ss_conf 3185357789999999999-998628968999768887765212467777889999999986299889985676420111
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCE-RAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVT 209 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e-~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~ 209 (284)
|++|-+...++..++.-+- +..++.-|+.++..|.|.-+.+|. +-++.++....|..++.. |..
T Consensus 43 fl~g~Id~~~a~~ii~~Ll~L~~~~~~~I~l~INS~GG~v~~g~----------aIyd~i~~~~~~V~Tv~~-----G~a 107 (215)
T 2f6i_A 43 YLTDEINKKTADELISQLLYLDNINHNDIKIYINSPGGSINEGL----------AILDIFNYIKSDIQTISF-----GLV 107 (215)
T ss_dssp EECSCBCHHHHHHHHHHHHHHHHHCCSCEEEEEEECCBCHHHHH----------HHHHHHHHSSSCEEEEEE-----EEE
T ss_pred EECCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH----------HHHHHHHHCCCCEEEEEE-----CCC
T ss_conf 98981278999999999999755899785999989997688999----------999999866998599997-----885
Q ss_pred EEEC----CCCC--EEEEECCCEEE-------CCCHHH-------------------HHHHHCC-------CCC-CCCHH
Q ss_conf 1201----4685--25553142110-------232788-------------------7876367-------788-72021
Q gi|254780820|r 210 ASYA----MLGD--IHLAEPGAEIG-------FAGRRV-------------------IEQTVRE-------KLP-DGFQR 249 (284)
Q Consensus 210 AS~a----~lgD--iiiaep~a~ig-------FaG~rV-------------------i~~t~~~-------~lp-~~fqt 249 (284)
||-| +.|+ ..++-|.|.+. +.|+.. ..+-++. .+. +-+-+
T Consensus 108 aS~as~Il~aG~kg~R~~~pns~iMiHq~s~~~~G~~~di~~~~~el~~~~~~i~~~~a~~tg~~~e~I~~~~~~d~~ls 187 (215)
T 2f6i_A 108 ASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMN 187 (215)
T ss_dssp CHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf 04568888607888468347756997368767788757999999999999999999999882999999998715881504
Q ss_pred HHHHHHCCCCCEEECH
Q ss_conf 5999968983537358
Q gi|254780820|r 250 SEYLVEHGMIDRIVHR 265 (284)
Q Consensus 250 ae~l~~~G~iD~iv~r 265 (284)
|+-.++-|+||.|++.
T Consensus 188 a~EA~e~GliD~Ii~~ 203 (215)
T 2f6i_A 188 ALEAKQYGIIDEVIET 203 (215)
T ss_dssp HHHHHHHTSCSEECCC
T ss_pred HHHHHHCCCCCEECCC
T ss_conf 9999983998698216
No 91
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=87.67 E-value=0.49 Score=27.27 Aligned_cols=123 Identities=15% Similarity=0.296 Sum_probs=68.7
Q ss_pred HHCCCCCHHHHHHHHHHHH-HH-HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 3185357789999999999-99-862896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCE-RA-IAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e-~A-~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|++|-+...+++.++.-+- +. .+...|+.++..|.|.-+.+|.. -++.++..+.|+.++.. |.
T Consensus 49 fL~g~Id~~~a~~iia~Ll~l~~~d~~k~I~l~INS~GG~v~~gla----------I~D~m~~~~~~V~Ti~~-----G~ 113 (218)
T 1y7o_A 49 MLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLA----------IVDTMNFIKADVQTIVM-----GM 113 (218)
T ss_dssp EEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHH----------HHHHHHHSSSCEEEEEE-----EE
T ss_pred EECCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH----------HHHHHHHCCCCEEEEEE-----EE
T ss_conf 9898986899999999999888519998789998289786878999----------99999856998799996-----25
Q ss_pred EEEEC----CCC--CEEEEECCCEE-------ECCCHHH-----------------HH----HHHC-------CCCC-CC
Q ss_conf 11201----468--52555314211-------0232788-----------------78----7636-------7788-72
Q gi|254780820|r 209 TASYA----MLG--DIHLAEPGAEI-------GFAGRRV-----------------IE----QTVR-------EKLP-DG 246 (284)
Q Consensus 209 ~AS~a----~lg--Diiiaep~a~i-------gFaG~rV-----------------i~----~t~~-------~~lp-~~ 246 (284)
.||-| +-| +-.++-|.|++ |+.|... +. +.+| +++. +-
T Consensus 114 AaS~aslIl~aG~kg~R~~~pns~iMiHqp~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~a~~Tg~~~~~I~~~~~rd~ 193 (218)
T 1y7o_A 114 AASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDN 193 (218)
T ss_dssp EETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred ECCHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCE
T ss_conf 54435689871688846874558888378855655553177999999999999999999999887979999998621790
Q ss_pred CHHHHHHHHCCCCCEEECHHHH
Q ss_conf 0215999968983537358999
Q gi|254780820|r 247 FQRSEYLVEHGMIDRIVHRHDI 268 (284)
Q Consensus 247 fqtae~l~~~G~iD~iv~r~~l 268 (284)
|-+|+-.++.|+||.|++.+++
T Consensus 194 ~lsa~EAleyGliD~Ii~~~~~ 215 (218)
T 1y7o_A 194 WMSAQETLEYGFIDEIMANNSL 215 (218)
T ss_dssp CBCHHHHHHHTSCSEECCCC--
T ss_pred EECHHHHHHCCCCCEECCCCCC
T ss_conf 6539999985998698246888
No 92
>2j01_5 50S ribosomal protein L32; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: g.41.8.5 PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=87.41 E-value=0.13 Score=31.58 Aligned_cols=23 Identities=30% Similarity=0.406 Sum_probs=18.8
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 10566768722178898633838899896
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
-++||+||+... ...|||+|||+
T Consensus 30 l~~C~~CG~~~~------pHrvC~~CG~Y 52 (60)
T 2j01_5 30 LVPCPECKAMKP------PHTVCPECGYY 52 (60)
T ss_dssp CBCCSSSSSCBC------TTCBCTTTCCS
T ss_pred EEECCCCCCEEC------CCEECCCCCCC
T ss_conf 468999997026------73687989819
No 93
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=84.13 E-value=1.3 Score=24.12 Aligned_cols=106 Identities=16% Similarity=0.224 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCEEEEEECC
Q ss_conf 577899999999999986289689997688877652124677778899999999862998-8998567642011112014
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLP-YIVVLTNPTTGGVTASYAM 214 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP-~I~vl~~pt~GGv~AS~a~ 214 (284)
+...+-+-+..+++.|.+.++|+++-+..+ ++ ++ ..+..|.+.|++ --.++.+ |..+....+.
T Consensus 167 ~t~~E~kvfra~a~aa~etg~PI~iHt~~~--~~-----a~-------e~l~iL~e~g~~~~rvvi~H-~d~~~d~~~~- 230 (339)
T 3gtx_A 167 ITPYEQLFFRAAARVQRETGVPIITHTQEG--QQ-----GP-------QQAELLTSLGADPARIMIGH-MDGNTDPAYH- 230 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCEEEECSTT--CC-----HH-------HHHHHHHHTTCCGGGEEECC-GGGCCCHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEECCCC--CC-----CH-------HHHHHHHHCCCCCCCEEEEE-CCCCCCHHHH-
T ss_conf 998999999999999998699679736876--55-----78-------99999987699964369980-4786789999-
Q ss_pred CCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCHHHHH---HHHCCCCCEEE
Q ss_conf 68525553142110232788787636778872021599---99689835373
Q gi|254780820|r 215 LGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQRSEY---LVEHGMIDRIV 263 (284)
Q Consensus 215 lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fqtae~---l~~~G~iD~iv 263 (284)
--+++.|+.|+|.|-.- + -.-..|.|+.+++. +.+.|..|.|+
T Consensus 231 ---~~~l~~G~~l~fD~~g~-~--~~~~~p~d~~r~~~l~~lv~~g~~drIL 276 (339)
T 3gtx_A 231 ---RETLRHGVSIAFDRIGL-Q--GMVGTPTDAERLSVLTTLLGEGYADRLL 276 (339)
T ss_dssp ---HHHHTTTCEEEECCTTC-C--SSTTCCCHHHHHHHHHHHHHTTCGGGEE
T ss_pred ---HHHHHCCCEEEECCCCC-C--CCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf ---99997693899755655-4--6667984788899999999857964099
No 94
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubredoxin-like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=83.50 E-value=0.13 Score=31.62 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=19.2
Q ss_pred CCCCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 4601056676872217889863383889989
Q gi|254780820|r 23 ENLWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 23 ~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
+-.|+ |+.||-+...++ .-.+||-|++
T Consensus 153 ~~~~~-C~~CG~i~~g~~---~p~~CP~C~~ 179 (191)
T 1lko_A 153 ATKWR-CRNCGYVHEGTG---APELCPACAH 179 (191)
T ss_dssp EEEEE-ETTTCCEEEEEE---CCSBCTTTCC
T ss_pred CCEEE-CCCCCCCCCCCC---CCCCCCCCCC
T ss_conf 84578-999986012899---9885979999
No 95
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=83.41 E-value=0.11 Score=32.16 Aligned_cols=35 Identities=14% Similarity=0.309 Sum_probs=26.3
Q ss_pred CCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 2247746010566768722178898633838899896
Q gi|254780820|r 18 RRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 18 kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
+.+..+- ++||.|++.....|-..-..||..||+=
T Consensus 5 ~~~~~~~--~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~V 39 (58)
T 1dl6_A 5 RLDALPR--VTCPNHPDAILVEDYRAGDMICPECGLV 39 (58)
T ss_dssp SCCCCSC--CSBTTBSSSCCEECSSSCCEECTTTCCE
T ss_pred CCCCCCC--CCCCCCCCCCEEEECCCCEEECCCCCCE
T ss_conf 2325675--5896987987778888991872789989
No 96
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=83.17 E-value=0.17 Score=30.71 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=22.4
Q ss_pred EECCCCCCEEEHH---HHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178---898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHK---DLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~---~l~~n~~VCp~C~~H~rl 57 (284)
.=||.|+.++|-+ +-....++|+.|+|-...
T Consensus 5 ~FCp~C~nmL~~~~~~~~~~l~~~C~~C~y~~~~ 38 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSEIA 38 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 8774657466364689886888989999831006
No 97
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=83.07 E-value=0.34 Score=28.42 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--EEEEECCCCCCEEEEEEC
Q ss_conf 577899999999999986289689997688877652124677778899999999862998--899856764201111201
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLP--YIVVLTNPTTGGVTASYA 213 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP--~I~vl~~pt~GGv~AS~a 213 (284)
+....-+-+..+++.|.+.++|+++-+..++ ++ ++ ..+..|++.|++ .+++ .+ |..+. .++.
T Consensus 184 ~t~~E~kv~rA~a~aa~etg~PI~iHt~~~~-~~-----~~-------e~l~il~~~Gvd~~~vvi-~H-~d~~~-~d~~ 247 (364)
T 3k2g_A 184 FTAEEEKSLRGAARAQVRTGLPLMVHLPGWF-RL-----AH-------RVLDLVEEEGADLRHTVL-CH-MNPSH-MDPV 247 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCEEEECCTTS-CC-----HH-------HHHHHHHHTTCCGGGEEE-CC-CGGGT-TCHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEECCCCC-CH-----HH-------HHHHHHHHCCCCCCCEEE-EE-CCCCC-CCHH
T ss_conf 9989999999999999996896573066654-20-----89-------999999981999422589-84-78999-9999
Q ss_pred CCCCEEEEECCCEEECCCHHHHHHH--HCCCCCCCCHHHH---HHHHCCCCCEEE
Q ss_conf 4685255531421102327887876--3677887202159---999689835373
Q gi|254780820|r 214 MLGDIHLAEPGAEIGFAGRRVIEQT--VREKLPDGFQRSE---YLVEHGMIDRIV 263 (284)
Q Consensus 214 ~lgDiiiaep~a~igFaG~rVi~~t--~~~~lp~~fqtae---~l~~~G~iD~iv 263 (284)
.+ --+++.|+.|+|.+-....-. .+-+.|.++++++ .+.++|+.|.|+
T Consensus 248 ~~--~~ll~~G~~l~fD~~G~~~~~~~~~~~~p~d~~r~~~i~~lv~~G~~drIL 300 (364)
T 3k2g_A 248 YQ--ATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRIL 300 (364)
T ss_dssp HH--HHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEE
T ss_pred HH--HHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99--999976939998415643346653445663678999999999857877599
No 98
>3ofq_0 50S ribosomal protein L32; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_Z 1p86_Z 2awb_0 2aw4_0 2i2v_0 2j28_0 2i2t_0* 2qao_0* 2qba_0* 2qbc_0* 2qbe_0 2qbg_0 2qbi_0* 2qbk_0* 2qov_0 2qox_0 2qoz_0* 2qp1_0* 2rdo_0 2vhm_0 ...
Probab=81.96 E-value=0.44 Score=27.58 Aligned_cols=22 Identities=5% Similarity=0.081 Sum_probs=18.1
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 10566768722178898633838899896
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
-..||+||++.. ...||| |||+
T Consensus 27 l~~C~~CG~~~~------pH~vC~-cG~Y 48 (56)
T 3ofq_0 27 LSVDKTSGEKHL------RHHITA-DGYY 48 (56)
T ss_dssp CBCCSSSCCCBC------SSSCCT-TSBC
T ss_pred CCCCCCCCCCCC------CCEECC-CCCC
T ss_conf 226889998605------857889-9889
No 99
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=80.39 E-value=0.29 Score=28.89 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=23.1
Q ss_pred EECCCCCCEEEHHH---HHHHCCCCCCCCCCEECC
Q ss_conf 05667687221788---986338388998962437
Q gi|254780820|r 27 VKCPETGAMVYHKD---LKENQWVISSSDFHMKIP 58 (284)
Q Consensus 27 ~kCp~C~~~i~~~~---l~~n~~VCp~C~~H~rl~ 58 (284)
.=||.|+.++|-++ -....++|+.|+|-..+.
T Consensus 5 ~FCp~C~nlL~~~~~~~~~~l~~~C~~C~y~~~~~ 39 (122)
T 1twf_I 5 RFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAG 39 (122)
T ss_dssp CBCSSSCCBCEEEEETTTTEEEEECSSSSCEEECS
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 87744373777255788877589889998851257
No 100
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infectious diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=79.76 E-value=1.7 Score=23.29 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 99999999999862896899976
Q gi|254780820|r 141 GEAIVKSCERAIAEKCPLVMFTA 163 (284)
Q Consensus 141 geki~~a~e~A~~~~~PlI~~~~ 163 (284)
|.-.....++|.+.+.|+|.++.
T Consensus 305 GK~p~~Va~~A~~~~vPviai~G 327 (383)
T 3cwc_A 305 GKVPIGVANIAKRYNKPVIGIAG 327 (383)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHCCCEEEEEC
T ss_conf 86299999999981999999966
No 101
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=79.45 E-value=1.3 Score=24.10 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=26.7
Q ss_pred CEECCCCCCEEEHHHHHH------------------------HCCCCCCCCCCEE---C---CHHHHHHHHCC
Q ss_conf 105667687221788986------------------------3383889989624---3---79999998455
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKE------------------------NQWVISSSDFHMK---I---PAKERLKFLFD 68 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~------------------------n~~VCp~C~~H~r---l---~areRi~~l~D 68 (284)
..|||-||+.+--.||-+ .-+-||.||--|. + .+..-+++|-|
T Consensus 8 MakCPlCG~~ldW~eLieqML~~en~~ei~kDre~Fl~~~~~F~FKCP~CGEEFyG~~Lp~~EaeKVFeLLNd 80 (95)
T 2k5c_A 8 MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRREAEKVFELLND 80 (95)
T ss_dssp CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETTSSCTTTHHHHHHHHHS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 4238867882679999999986520999986199999999877000886657887246887789999999997
No 102
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B*
Probab=78.97 E-value=0.23 Score=29.70 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=32.4
Q ss_pred EECCCCCCEEE-----------HH---HHH-HHCCCCCCCCCCEECCHHHHHHHHCCC-CCCCCCCCCCCCCHHCCCCCC
Q ss_conf 05667687221-----------78---898-633838899896243799999984556-542013345687020186764
Q gi|254780820|r 27 VKCPETGAMVY-----------HK---DLK-ENQWVISSSDFHMKIPAKERLKFLFDN-AKYCLLDQPQVCQDPLKFRDN 90 (284)
Q Consensus 27 ~kCp~C~~~i~-----------~~---~l~-~n~~VCp~C~~H~rl~areRi~~l~D~-gsf~Ei~~~~~~~DPL~F~d~ 90 (284)
.+||-|++..+ +- .++ ...+||+.||--+- ++...-...-.- ..+.+.+..+.
T Consensus 3 M~C~~Cg~~~~~~~~~~~~~~~kG~~~~i~~~~~~~C~~Cge~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------- 71 (133)
T 3o9x_A 3 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIM-NKEESDAFMAQVKAFRASVNAETV---------- 71 (133)
T ss_dssp CBCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEEC-CHHHHHHHHHHHHHHHHHHHTTTC----------
T ss_pred CCCCCCCCCCEECCCCEEEEEECCEEEEECCEEEEECCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCC----------
T ss_conf 899689995403012114799778889983512158988878744-713568999999998864212689----------
Q ss_pred CCHHHHHHHHHHHCCCC
Q ss_conf 20356677666421667
Q gi|254780820|r 91 KKYIDRLKENRSKTGLI 107 (284)
Q Consensus 91 k~Y~drl~~a~~kTg~~ 107 (284)
..++|++.|++.|+.
T Consensus 72 --~~e~ir~~R~~~gls 86 (133)
T 3o9x_A 72 --APEFIVKVRKKLSLT 86 (133)
T ss_dssp --CHHHHHHHHHHTTCC
T ss_pred --CHHHHHHHHHHCCCC
T ss_conf --999999999984999
No 103
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=78.76 E-value=2.2 Score=22.39 Aligned_cols=105 Identities=19% Similarity=0.218 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC
Q ss_conf 57789999999999998628968999768887765212467777889999999986299889985676420111120146
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML 215 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l 215 (284)
.....-+-+.++++.|.+.++|+++-+..++.. .. .-+..+.+.+.|.-.++...|..+....++.
T Consensus 145 ~~~~q~~~f~~~~~~A~e~~lPv~iH~r~~~~~----~~---------~~l~~~~~~~~~~~~~~i~H~~~~~~~~~~~- 210 (314)
T 2vc7_A 145 ITKDVEKVIRAAAIANKETKVPIITHSNAHNNT----GL---------EQQRILTEEGVDPGKILIGHLGDTDNIDYIK- 210 (314)
T ss_dssp SCHHHHHHHHHHHHHHHHHCCCEEEECCTTTTH----HH---------HHHHHHHHTTCCGGGEEETTGGGCCCHHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH----HH---------HHHHHHHHHCCCCCCCEEEECCCCCCHHHHH-
T ss_conf 987999999999999998699379850664141----89---------9999999741687765787449988799999-
Q ss_pred CCEEEEECCCEEECCCHHHHHHHHCCCCCCCCHHH---HHHHHCCCCCEEE
Q ss_conf 85255531421102327887876367788720215---9999689835373
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQRS---EYLVEHGMIDRIV 263 (284)
Q Consensus 216 gDiiiaep~a~igFaG~rVi~~t~~~~lp~~fqta---e~l~~~G~iD~iv 263 (284)
-+++.|..|+|.|-... ...| +-+++ ..+++.|..|.|+
T Consensus 211 ---~~l~~G~~i~fd~~~~~-----~~~~-~~~~~~~~~~li~~g~~drIl 252 (314)
T 2vc7_A 211 ---KIADKGSFIGLDRYGLD-----LFLP-VDKRNETTLRLIKDGYSDKIM 252 (314)
T ss_dssp ---HHHHTTCEEEECCTTCT-----TTSC-HHHHHHHHHHHHHTTCTTTEE
T ss_pred ---HHHHCCCEEEECCCCCC-----CCCC-HHHHHHHHHHHHHHCCCCEEE
T ss_conf ---99975987986761211-----3483-489999999999864940099
No 104
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=78.57 E-value=1.1 Score=24.76 Aligned_cols=88 Identities=17% Similarity=0.327 Sum_probs=55.7
Q ss_pred EEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-----HCCCEEEEECCCCCCCCCCHHHHHHHH--------
Q ss_conf 8787041499999833031853577899999999999986-----289689997688877652124677778--------
Q gi|254780820|r 114 VGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-----EKCPLVMFTASGGARMQEGILSLMQLP-------- 180 (284)
Q Consensus 114 ~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-----~~~PlI~~~~SGGaRMqEG~~sL~qMa-------- 180 (284)
..+|-|.+|.+.- || ..+++--..|+..|-+ ++.-+-.+.-.|..-..|.+.++.-.+
T Consensus 82 l~kIfGkRvIi~g------~g---~qv~qva~gai~Eadrhnirgerisvdtip~~Ge~~l~eAv~av~rl~r~~~lvla 152 (223)
T 1y7p_A 82 FERVFGKRVIILG------GG---ALVSQVAIGAISEADRHNLRGERISVDTMPVVGEEEIAEAVKAVSRLHRAEVLVLA 152 (223)
T ss_dssp HHHHTCEEEEEEE------CH---HHHHHHHHHHHHHHHHHHHTSCCEEEEEEECCSHHHHHHHHHHGGGSTTEEEEEEE
T ss_pred HHHHCCEEEEEEC------CC---CEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 6871531799988------89---57436455357777763165775237778506778999999986135677669980
Q ss_pred ------HHHHHHHHHHHCCCCEEEE-------------ECCCCCCEEEE
Q ss_conf ------8999999998629988998-------------56764201111
Q gi|254780820|r 181 ------RTTIAINMLKDAGLPYIVV-------------LTNPTTGGVTA 210 (284)
Q Consensus 181 ------kt~~a~~~l~~~~lP~I~v-------------l~~pt~GGv~A 210 (284)
+++.|+.++++.|+|.||+ .|||.-.||.|
T Consensus 153 gs~mgg~i~~~v~~~~~~~~~vi~l~m~gs~~~~~dlvv~dp~qag~~a 201 (223)
T 1y7p_A 153 GGIMGGKITEEVKKLRKSGIRVISLSMFGSVPDVADVVISDPVMAGTLA 201 (223)
T ss_dssp SSBCCTHHHHHHHHHGGGTCEEEEESCBSSHHHHSSEEESSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCHHHHHHH
T ss_conf 6531655899999999869859996378886540016755834655667
No 105
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=78.47 E-value=2.1 Score=22.65 Aligned_cols=21 Identities=19% Similarity=0.329 Sum_probs=16.7
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 1056676872217889863383889989
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
-.+|++|+..-.+ .+||.||-
T Consensus 6 irkC~~C~~YTL~-------~~Cp~CG~ 26 (60)
T 2apo_B 6 MKKCPKCGLYTLK-------EICPKCGE 26 (60)
T ss_dssp CEECTTTCCEESS-------SBCSSSCS
T ss_pred HHHCCCCCCEECC-------CCCCCCCC
T ss_conf 6518746665354-------53767878
No 106
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=77.50 E-value=0.48 Score=27.34 Aligned_cols=26 Identities=8% Similarity=0.081 Sum_probs=12.2
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 01056676872217889863383889989
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
++.+|+.|+.++... .|...||+|++
T Consensus 139 v~a~c~~c~~~l~~~---~~~~~C~~cg~ 164 (179)
T 3m7n_A 139 LRALCSNCKTEMVRE---GDILKCPECGR 164 (179)
T ss_dssp EECBCTTTCCBCEEC---SSSEECSSSCC
T ss_pred EEEECCCCCCEEEEE---CCEEECCCCCC
T ss_conf 999678778607770---99999999998
No 107
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=77.40 E-value=0.89 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.117 Sum_probs=20.6
Q ss_pred EECCCCCCEEEHHH------------------HHHHCCCCCCCCCC
Q ss_conf 05667687221788------------------98633838899896
Q gi|254780820|r 27 VKCPETGAMVYHKD------------------LKENQWVISSSDFH 54 (284)
Q Consensus 27 ~kCp~C~~~i~~~~------------------l~~n~~VCp~C~~H 54 (284)
..|++|+....-.+ +...++.||+||-+
T Consensus 71 ~~C~~Cg~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 71 FKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred EECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8986789841114200011211122223343234655479197698
No 108
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=76.49 E-value=0.67 Score=26.26 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=19.4
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCC-CEEC
Q ss_conf 056676872217889863383889989-6243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDF-HMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~-H~rl 57 (284)
..|++|+......+. .+..||+||- +.++
T Consensus 74 ~~C~~Cg~~~~~~~~--~~~~CP~Cgs~~~~i 103 (119)
T 2kdx_A 74 LECKDCSHVFKPNAL--DYGVCEKCHSKNVII 103 (119)
T ss_dssp EECSSSSCEECSCCS--TTCCCSSSSSCCCEE
T ss_pred EECCCCCCEECCCCC--CCCCCCCCCCCCCEE
T ss_conf 898789988334775--477290978999797
No 109
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=75.85 E-value=0.6 Score=26.59 Aligned_cols=10 Identities=0% Similarity=-0.134 Sum_probs=3.6
Q ss_pred EEEECEEEEE
Q ss_conf 7870414999
Q gi|254780820|r 115 GNVRDFKLVA 124 (284)
Q Consensus 115 G~I~G~~vvv 124 (284)
-.|+...+.+
T Consensus 90 ~~v~~~~a~V 99 (209)
T 2nn6_I 90 SSINSRFAKV 99 (209)
T ss_dssp EEECSSEEEE
T ss_pred EEECCCEEEE
T ss_conf 9984787999
No 110
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase/structural protein complex; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B
Probab=74.92 E-value=2.4 Score=22.21 Aligned_cols=22 Identities=18% Similarity=0.210 Sum_probs=17.0
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 01056676872217889863383889989
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
+-.+|++|+..-.+ .+||.||-
T Consensus 4 ~irkC~~C~~YTLk-------~~CP~CG~ 25 (60)
T 2aus_D 4 RIRKCPKCGRYTLK-------ETCPVCGE 25 (60)
T ss_dssp CCEECTTTCCEESS-------SBCTTTCS
T ss_pred HHHCCCCCCCEECC-------CCCCCCCC
T ss_conf 41148746666355-------63767878
No 111
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=74.81 E-value=0.39 Score=27.97 Aligned_cols=31 Identities=16% Similarity=0.306 Sum_probs=22.2
Q ss_pred CCEECCCCCCE--EEHHHHHHHCCCCCCCCCCE
Q ss_conf 01056676872--21788986338388998962
Q gi|254780820|r 25 LWVKCPETGAM--VYHKDLKENQWVISSSDFHM 55 (284)
Q Consensus 25 lW~kCp~C~~~--i~~~~l~~n~~VCp~C~~H~ 55 (284)
.=..||.|++. ....|-.....||..||+=.
T Consensus 20 ~~~~C~~C~~~~~~iv~D~~~G~~vC~~CG~Vl 52 (345)
T 3k7a_M 20 IVLTCPECKVYPPKIVERFSEGDVVCALCGLVL 52 (345)
T ss_dssp CCCCCSTTCCSCCCCCCCSSSCSCCCSSSCCCC
T ss_pred CCEECCCCCCCCCCEEEECCCCCEECCCCCCCC
T ss_conf 031895999999864678788988314688780
No 112
>1tg6_A Putative ATP-dependent CLP protease proteolytic subunit; mitochondrial CLPP, CLP/HSP 100, X-RAY crystallography, ATP- dependent protease; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=74.07 E-value=4.8 Score=19.92 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=63.7
Q ss_pred HHCCCCCHHHHHHHHHHHH--HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 3185357789999999999--99862896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCE--RAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e--~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|++|-+...++..|+.-+- .+....-|+-++..|-|--+.+|. . -++.++.-+.|..++.. |.
T Consensus 86 fl~g~Idd~~a~~iiaqLl~Le~ed~~k~I~lyINSpGGsv~~Gl----a------IyD~m~~i~~~V~Tv~~-----G~ 150 (277)
T 1tg6_A 86 CVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGL----A------IYDTMQYILNPICTWCV-----GQ 150 (277)
T ss_dssp EEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHH----H------HHHHHHHSCSCEEEEEE-----EE
T ss_pred EECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH----H------HHHHHHHCCCCCEEEEE-----EE
T ss_conf 989877589999999999998665999878999979995687899----9------99999854888569986-----32
Q ss_pred EEEEC----CCCC--EEEEECCCEEE-------CCCHHH-HH------------------HHHCC-------CC-CCCCH
Q ss_conf 11201----4685--25553142110-------232788-78------------------76367-------78-87202
Q gi|254780820|r 209 TASYA----MLGD--IHLAEPGAEIG-------FAGRRV-IE------------------QTVRE-------KL-PDGFQ 248 (284)
Q Consensus 209 ~AS~a----~lgD--iiiaep~a~ig-------FaG~rV-i~------------------~t~~~-------~l-p~~fq 248 (284)
.||-| +-|+ --++-|+|.|. +-|..- |+ +-+|+ ++ -+-|-
T Consensus 151 AaSmaslIlaaG~kgkR~a~pns~iMIHqp~~~~~G~a~di~~~a~el~~~~~~l~~iya~~TG~~~e~I~~~m~rD~~m 230 (277)
T 1tg6_A 151 AASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYM 230 (277)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEE
T ss_pred ECCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 23056789872677710338998788725865777589999999999999999999999998793999999875068406
Q ss_pred HHHHHHHCCCCCEEECH
Q ss_conf 15999968983537358
Q gi|254780820|r 249 RSEYLVEHGMIDRIVHR 265 (284)
Q Consensus 249 tae~l~~~G~iD~iv~r 265 (284)
+|+-.++-|+||.|+..
T Consensus 231 sa~EA~eyGliD~Ii~~ 247 (277)
T 1tg6_A 231 SPMEAQEFGILDKVLVH 247 (277)
T ss_dssp CHHHHHHHTSCSEECSS
T ss_pred CHHHHHHCCCCCEEECC
T ss_conf 59999983998789337
No 113
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=73.33 E-value=0.54 Score=26.95 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=23.4
Q ss_pred CCCEECCCCCCE--EEHHHHHHHCCCCCCCCCCE
Q ss_conf 601056676872--21788986338388998962
Q gi|254780820|r 24 NLWVKCPETGAM--VYHKDLKENQWVISSSDFHM 55 (284)
Q Consensus 24 ~lW~kCp~C~~~--i~~~~l~~n~~VCp~C~~H~ 55 (284)
+.=..||.|++. ....|-+....||..||+=.
T Consensus 19 Nitl~CPeCGS~~t~IVeD~s~GEiVCsdCGLVI 52 (197)
T 3k1f_M 19 NIVLTCPECKVYPPKIVERFSEGDVVCALCGLVL 52 (197)
T ss_dssp CCCCCCTTTCCSSCCEEEEGGGTEEEETTTCBBC
T ss_pred EEEEECCCCCCCCCEEEEECCCCCEECCCCCEEE
T ss_conf 6546899999989989897998968971489292
No 114
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protein structure initiative, midwest center for structural genomics; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=70.98 E-value=0.35 Score=28.38 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=21.3
Q ss_pred CEECCCCCCEEEHHHHH---HHCCCCCCCCCCEECCH
Q ss_conf 10566768722178898---63383889989624379
Q gi|254780820|r 26 WVKCPETGAMVYHKDLK---ENQWVISSSDFHMKIPA 59 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~---~n~~VCp~C~~H~rl~a 59 (284)
|.=||+||+.+..+..+ ..-++||+|++.+.-.|
T Consensus 3 ~~yCp~CG~~~~~~~~~g~~~~~~~C~~C~~~~y~~p 39 (189)
T 3cng_A 3 MKFCSQCGGEVILRIPEGDTLPRYICPKCHTIHYQNP 39 (189)
T ss_dssp CCBCTTTCCBCEEECCTTCSSCEEEETTTTEEECCCC
T ss_pred CEECCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 6058467875640346889724753799997608999
No 115
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=70.45 E-value=0.47 Score=27.41 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=22.2
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 0566768722178898633838899896
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
..||.|++.....|-.....||..||.=
T Consensus 6 ~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~V 33 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYV 33 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCB
T ss_pred CCCCCCCCCCEEEECCCCEEECCCCCCE
T ss_conf 5385988983788688892862789859
No 116
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=69.57 E-value=0.68 Score=26.18 Aligned_cols=48 Identities=15% Similarity=0.191 Sum_probs=29.0
Q ss_pred CCCCC-EECCC--CCCEEEHHHHHHHCCCCCCCCCCEE-CCHHHHHHHHCCCCC
Q ss_conf 74601-05667--6872217889863383889989624-379999998455654
Q gi|254780820|r 22 PENLW-VKCPE--TGAMVYHKDLKENQWVISSSDFHMK-IPAKERLKFLFDNAK 71 (284)
Q Consensus 22 p~~lW-~kCp~--C~~~i~~~~l~~n~~VCp~C~~H~r-l~areRi~~l~D~gs 71 (284)
++++| ..||. |+..+.. -..+.|.|+.|+.... ...|=++.+.++++|
T Consensus 38 ~~~~~Y~aCp~~~C~kKv~~--~~~~~~~C~~C~~~~~~~~~ry~l~~~i~D~T 89 (181)
T 1l1o_C 38 KENCMYQACPTQDCNKKVID--QQNGLYRCEKCDTEFPNFKYRMILSVNIADFQ 89 (181)
T ss_dssp CSTTEEEBCCSTTCCCBCEE--ETTTEEEETTTTEEESSCCEEEEEEEEEECSS
T ss_pred CCCEEECCCCCHHCCCCCCC--CCCCEEECCCCCCCCCCEEEEEEEEEEEECCC
T ss_conf 79889825890435983555--89982888878982776069999999998289
No 117
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: MSE; 2.20A {Escherichia coli K12} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=69.16 E-value=0.68 Score=26.20 Aligned_cols=23 Identities=17% Similarity=0.471 Sum_probs=9.6
Q ss_pred CHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3031853577899999999999986
Q gi|254780820|r 129 FSFIGGSIGIAAGEAIVKSCERAIA 153 (284)
Q Consensus 129 f~F~GGSmG~~~geki~~a~e~A~~ 153 (284)
+++.||-+- .||-...|+.+-+.
T Consensus 166 WslPgGfVE--~GEt~eeAa~REv~ 188 (269)
T 1vk6_A 166 HTVLAGFVE--VGETLEQAVAREVM 188 (269)
T ss_dssp CBCEEEECC--TTCCHHHHHHHHHH
T ss_pred EEECCCCCC--CCCCHHHHHHHHHH
T ss_conf 760166543--89989999889876
No 118
>1nnq_A Rubrerythrin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.35A {Pyrococcus furiosus} SCOP: a.25.1.1 g.41.5.1 PDB: 2hr5_A
Probab=68.89 E-value=1.6 Score=23.40 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 445422247746010566768722178898633838899896
Q gi|254780820|r 13 NSVFGRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 13 ~~~~~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
..+.+.++.+..-.-.||.||-+... +.--+||-|++.
T Consensus 126 ~~l~~~~~~~~~~~~vC~~CG~i~~g----~~P~~CPvC~~p 163 (171)
T 1nnq_A 126 EKAEKGEDIEIKKVYICPICGYTAVD----EAPEYCPVCGAP 163 (171)
T ss_dssp HHHHTTCCCCCSCEEECTTTCCEEES----CCCSBCTTTCCB
T ss_pred HHHHHCCCCCCCCEEECCCCCCCCCC----CCCCCCCCCCCC
T ss_conf 87551245677873589989393899----999979799996
No 119
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5'-triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=67.61 E-value=6.2 Score=19.08 Aligned_cols=58 Identities=19% Similarity=0.314 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH--H---------HCCCCEEEEEC
Q ss_conf 853577899999999999986289689997688877652124677778899999999--8---------62998899856
Q gi|254780820|r 133 GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML--K---------DAGLPYIVVLT 201 (284)
Q Consensus 133 GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l--~---------~~~lP~I~vl~ 201 (284)
-|-+|...=|--..|+++|.++++|+..+|-+ ||++-+-.|-+-+ + +..-|.|.++.
T Consensus 350 PGGFG~RGiEGKI~Ai~yARen~IPfLGICLG------------mQ~aVIEfARNVlgl~dAnStEf~~~t~~pVI~lm~ 417 (545)
T 1s1m_A 350 PGGFGYRGVEGMITTARFARENNIPYLGICLG------------MQVALIDYARHVANMENANSTEFVPDCKYPVVALIT 417 (545)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH------------HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHH------------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECH
T ss_conf 78888777031999999997679985324676------------799999999973599998720479999997899542
Q ss_pred C
Q ss_conf 7
Q gi|254780820|r 202 N 202 (284)
Q Consensus 202 ~ 202 (284)
.
T Consensus 418 e 418 (545)
T 1s1m_A 418 E 418 (545)
T ss_dssp T
T ss_pred H
T ss_conf 2
No 120
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=67.49 E-value=0.91 Score=25.27 Aligned_cols=29 Identities=28% Similarity=0.593 Sum_probs=19.2
Q ss_pred CCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 2224774601056676872217889863383889989
Q gi|254780820|r 17 GRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 17 ~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
..+.+|...| +|..|.. ..|+|+|=.|||
T Consensus 207 ~~~~~~~~~~-~C~~c~~-------~~nlw~CL~CG~ 235 (854)
T 3ihp_A 207 NPARIPPCGW-KCSKCDM-------RENLWLNLTDGS 235 (854)
T ss_dssp SCCCCCSSCC-CCSSSCC-------CSSEEEETTTCC
T ss_pred CCCCCCCCCC-CCCCCCC-------CCCEEEEEECCC
T ss_conf 7764799898-1345899-------886489975896
No 121
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=67.19 E-value=0.48 Score=27.34 Aligned_cols=35 Identities=11% Similarity=0.352 Sum_probs=23.4
Q ss_pred CCCCCCEECCCCCCE---EEH------HHHHHHCCCCCCCCCCEE
Q ss_conf 774601056676872---217------889863383889989624
Q gi|254780820|r 21 IPENLWVKCPETGAM---VYH------KDLKENQWVISSSDFHMK 56 (284)
Q Consensus 21 ip~~lW~kCp~C~~~---i~~------~~l~~n~~VCp~C~~H~r 56 (284)
.|... .+||.|+.. .+. +|=.--+|+|.+|+|++|
T Consensus 11 ~p~~~-~~Cp~C~~~~~~~~~~QtRsaDE~~T~fy~C~~C~~~wr 54 (57)
T 1qyp_A 11 LPTTK-ITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp SCEEE-CCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred CCCCC-CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCE
T ss_conf 79333-899899698269999640346778759999489898741
No 122
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=66.60 E-value=6.7 Score=18.83 Aligned_cols=46 Identities=22% Similarity=0.392 Sum_probs=30.1
Q ss_pred HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCE
Q ss_conf 289689997688877652124677778899999999862998899856764201
Q gi|254780820|r 154 EKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGG 207 (284)
Q Consensus 154 ~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GG 207 (284)
..+|+|.+..||| |.-|+..++-...| +.+.||..-+-+..-..||
T Consensus 185 ~~vP~Iai~~SGG-----G~RAml~g~G~l~a---ld~~GLLq~~tYlaGlSGg 230 (749)
T 1cjy_A 185 RDVPVVAILGSGG-----GFRAMVGFSGVMKA---LYESGILDCATYVAGLSGS 230 (749)
T ss_dssp SSCCCEEEEECCC-----HHHHHHHHHHHHHH---HHHTSCGGGEEEEEECHHH
T ss_pred CCCCEEEEECCCC-----CHHHHHCCCHHHHH---HHHCCCCCCHHHHHCCCCC
T ss_conf 6686688751676-----07677603367999---8755851001023115665
No 123
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=65.40 E-value=0.51 Score=27.14 Aligned_cols=70 Identities=10% Similarity=0.236 Sum_probs=34.9
Q ss_pred EECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 83303185357789999999999998628968999768887765212467777889999999986299889985676420
Q gi|254780820|r 127 HEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTG 206 (284)
Q Consensus 127 ~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~G 206 (284)
+...-+||.+..++| -+.+.. -+++.. |+. .-+| +.+... -.+-.....++.+.+...|+--++.||..-
T Consensus 306 v~pG~~~G~~TTVEG-lL~~i~-d~l~~~-~~~-~gDs----~~~~~~--~k~~~~l~~L~~~~~g~~~fTlIldDP~Gn 375 (404)
T 2qkd_A 306 LGMAVLGGKFTTLEG-LLKDIR-ELVTKN-PFT-LGDS----SNPDQS--EKLQEFSQKLGQIIEGKMKAHFIMNDPAGN 375 (404)
T ss_dssp ECTTTTCSEEEEHHH-HHHHHH-HHHHSS-CCC-SSSC----CCGGGC--HHHHHHHHHHHHHHTTSSCEEEEEEETTCC
T ss_pred ECCCCCCCEEEEHHH-HHHHHH-HHHHHC-HHH-CCCC----CCHHHH--HHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 758766670774899-999999-999744-021-0477----898999--999999999999972898559999889878
No 124
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc-binding motif, DNA replication; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=64.93 E-value=0.59 Score=26.67 Aligned_cols=49 Identities=8% Similarity=0.098 Sum_probs=30.0
Q ss_pred CCCCCCCEECCCCCCEEEHHHH--------HHHCCCCCCCCCCEE-CCHHHHHHHHCC
Q ss_conf 4774601056676872217889--------863383889989624-379999998455
Q gi|254780820|r 20 AIPENLWVKCPETGAMVYHKDL--------KENQWVISSSDFHMK-IPAKERLKFLFD 68 (284)
Q Consensus 20 ~ip~~lW~kCp~C~~~i~~~~l--------~~n~~VCp~C~~H~r-l~areRi~~l~D 68 (284)
.--+-|..+||+|+....-+-+ .-+...||+|+..+. ..-..++++.+.
T Consensus 16 k~c~~l~l~C~~C~~~~~f~gv~~~~~~~~~~~g~~C~~c~~~~~~~~i~Nql~l~iR 73 (206)
T 3flo_B 16 KDTVTLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPLQLTSQIEHSIR 73 (206)
T ss_dssp TTCCCEEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6783478689999985037873036776200476788898995899999999999999
No 125
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=64.63 E-value=0.71 Score=26.08 Aligned_cols=30 Identities=3% Similarity=0.045 Sum_probs=19.8
Q ss_pred EECCCCCCEEEHH----------HHHHHCCCCCCCCCCEE
Q ss_conf 0566768722178----------89863383889989624
Q gi|254780820|r 27 VKCPETGAMVYHK----------DLKENQWVISSSDFHMK 56 (284)
Q Consensus 27 ~kCp~C~~~i~~~----------~l~~n~~VCp~C~~H~r 56 (284)
.-||+|++.-..+ +.----+.||+|||+..
T Consensus 13 SlCp~C~~~g~tr~l~t~IPyF~evii~sf~C~~CG~kn~ 52 (404)
T 2qkd_A 13 SLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNT 52 (404)
T ss_dssp EECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCEEE
T ss_pred EECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC
T ss_conf 3175678787799998438876638999998998899243
No 126
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=64.62 E-value=1.9 Score=22.84 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=19.5
Q ss_pred CCCEECC--CCCCEEEHHHHHHH----CCCCCCCCCCEEC
Q ss_conf 6010566--76872217889863----3838899896243
Q gi|254780820|r 24 NLWVKCP--ETGAMVYHKDLKEN----QWVISSSDFHMKI 57 (284)
Q Consensus 24 ~lW~kCp--~C~~~i~~~~l~~n----~~VCp~C~~H~rl 57 (284)
++| || +|+..+...+-... ..+|+.|++-|=.
T Consensus 25 ~~w--CP~p~C~~~i~~~~~~~~~~c~~~~c~~C~~~fC~ 62 (80)
T 2jmo_A 25 GVL--CPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCR 62 (80)
T ss_dssp SCC--CCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEET
T ss_pred CEE--CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECC
T ss_conf 968--97999974278789877545578613999596673
No 127
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=63.40 E-value=2.1 Score=22.63 Aligned_cols=29 Identities=10% Similarity=0.250 Sum_probs=25.7
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 01056676872217889863383889989
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
.|-.|..||+.+-++.+++.++.|..|.+
T Consensus 9 V~F~C~~CgdtlKK~kv~~H~~~Cr~~~~ 37 (79)
T 1wjv_A 9 VFFTCNACGESVKKIQVEKHVSNCRNCEC 37 (79)
T ss_dssp CEEEESSSCCEEETTHHHHHHHHCTTCCE
T ss_pred EEEECCCCCCEECCCCCHHHHHHCCCCCE
T ss_conf 58888878787122014889986789990
No 128
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=62.99 E-value=0.43 Score=27.65 Aligned_cols=132 Identities=19% Similarity=0.225 Sum_probs=67.1
Q ss_pred EEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 99998330318535778999999999999862896899976888776521246777788999999998629988998567
Q gi|254780820|r 123 VAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 123 vv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
.....-+.-||++++.+.|-+ .| ..-|+|+++.=||.-|.- ..+......++|.+.|+.|
T Consensus 409 ~~~~~~~g~~G~~~~~aiGaa------~a--~~~~vv~i~GDGsf~~~~------------~eL~Ta~r~~lpi~vvV~N 468 (556)
T 3hww_A 409 VYSNRGASGIDGLLSTAAGVQ------RA--SGKPTLAIVGDLSALYDL------------NALALLRQVSAPLVLIVVN 468 (556)
T ss_dssp EEECCSSCCSSSHHHHHHHHH------HH--HCCCEEEEEEHHHHHHTG------------GGHHHHTTCSSCEEEEEEE
T ss_pred ECCCCCCCCCCCCCHHHHHHH------HC--CCCCCEEEECCHHHHCCH------------HHHHHHHHHCCCCEEEEEE
T ss_conf 403786667777437689998------54--699751485663664267------------9999999849695899997
Q ss_pred CCCCEEEEEECC---CCCEEEEEC-C-------CEEECCCHHHHHHHHCCCCCCCCHHHHHHHHC---CCCCEEECHHHH
Q ss_conf 642011112014---685255531-4-------21102327887876367788720215999968---983537358999
Q gi|254780820|r 203 PTTGGVTASYAM---LGDIHLAEP-G-------AEIGFAGRRVIEQTVREKLPDGFQRSEYLVEH---GMIDRIVHRHDI 268 (284)
Q Consensus 203 pt~GGv~AS~a~---lgDiiiaep-~-------a~igFaG~rVi~~t~~~~lp~~fqtae~l~~~---G~iD~iv~r~~l 268 (284)
.-.+|+...... -.+-.+..| + .-.|+-|.|| ..-++|.+-++.+ +++ -.||.++++++-
T Consensus 469 N~g~~i~~~~~~~~~~~~~~~~~~~~~d~~~lA~a~G~~~~~v---~~~~el~~al~~a---~~~~~p~lIeV~id~~~~ 542 (556)
T 3hww_A 469 NNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRP---QNWQELETAFADA---WRTPTTTVIEMVVNDTDG 542 (556)
T ss_dssp SCC-----------------CCCCCCCCSHHHHHHTTCEEECC---SSHHHHHHHHHHH---TTSSSEEEEEEECCSSHH
T ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE---CCHHHHHHHHHHH---HHCCCEEEEEEEECCHHH
T ss_conf 9976776102013432342047899999999999679969996---8999999999999---868981999998082777
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999972
Q gi|254780820|r 269 PEVVSSLCKILT 280 (284)
Q Consensus 269 ~~~i~~ll~il~ 280 (284)
.+++.+|++-+.
T Consensus 543 ~~~~~~~~~~~~ 554 (556)
T 3hww_A 543 AQTLQQLLAQVS 554 (556)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999985
No 129
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.79 E-value=0.5 Score=27.19 Aligned_cols=42 Identities=17% Similarity=0.254 Sum_probs=28.1
Q ss_pred CCEECCCCCCEE--EHHHHHHH--CCCCCCCCCCEECCHHHHHHHH
Q ss_conf 010566768722--17889863--3838899896243799999984
Q gi|254780820|r 25 LWVKCPETGAMV--YHKDLKEN--QWVISSSDFHMKIPAKERLKFL 66 (284)
Q Consensus 25 lW~kCp~C~~~i--~~~~l~~n--~~VCp~C~~H~rl~areRi~~l 66 (284)
.++.||.|+..- +.++-+.. +..|..||+...+.+++.+.-+
T Consensus 102 ~YVlC~~C~sPdT~l~k~~k~~~~~l~C~aCGa~~~v~~~~Kl~~~ 147 (157)
T 2e9h_A 102 KFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTF 147 (157)
T ss_dssp HTTSCTTTCCSCCEEEEETTTTEEEEECSSSCCEEECCCCSSHHHH
T ss_pred HEEECCCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCHHHHHHE
T ss_conf 5899899989864999914787998481126998861837755200
No 130
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=62.71 E-value=3.2 Score=21.24 Aligned_cols=45 Identities=22% Similarity=0.426 Sum_probs=33.9
Q ss_pred CCCEECCCCCCE--EEHHHHHHHCCC--CCCCCCCEECCHHHHHHHHCCCCCCCCCCC
Q ss_conf 601056676872--217889863383--889989624379999998455654201334
Q gi|254780820|r 24 NLWVKCPETGAM--VYHKDLKENQWV--ISSSDFHMKIPAKERLKFLFDNAKYCLLDQ 77 (284)
Q Consensus 24 ~lW~kCp~C~~~--i~~~~l~~n~~V--Cp~C~~H~rl~areRi~~l~D~gsf~Ei~~ 77 (284)
.....|| ||.. +...+|++..-| ||.|.-..|+ +||.+.+++...
T Consensus 21 ~~~ypCr-CGd~F~ite~dLe~ge~vv~C~sCSL~IrV--------if~~ed~~~~~~ 69 (83)
T 1yop_A 21 MFTYPCP-CGDRFQIYLDDMFEGEKVAVCPSCSLMIDV--------VFDKEDLAEYYE 69 (83)
T ss_dssp EEEEEET-TTEEEEEEHHHHHTTCCEEECSSSCCEEEC--------BCCSSHHHHHHH
T ss_pred EEEECCC-CCCEEEECHHHHHCCCEEEECCCCCCEEEE--------EECHHHHHHHHH
T ss_conf 8986268-899689999998289969979999618999--------946478444555
No 131
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=62.57 E-value=0.42 Score=27.74 Aligned_cols=43 Identities=16% Similarity=0.278 Sum_probs=29.0
Q ss_pred CCEECCCCCCEE--EHHHHHHHCC--CCCCCCCCEECCHHHHHHHHC
Q ss_conf 010566768722--1788986338--388998962437999999845
Q gi|254780820|r 25 LWVKCPETGAMV--YHKDLKENQW--VISSSDFHMKIPAKERLKFLF 67 (284)
Q Consensus 25 lW~kCp~C~~~i--~~~~l~~n~~--VCp~C~~H~rl~areRi~~l~ 67 (284)
.++.||.|+..- +.++=+..++ .|..||+...+.++.++..++
T Consensus 95 ~YVlC~~C~sPeT~l~k~~k~~~~~l~C~aCGa~~~v~~~~k~~~~i 141 (170)
T 2g2k_A 95 KFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFI 141 (170)
T ss_dssp HHHSCTTTSSSCEEEEEETTTTEEEEEETTTCCCCCSCSSSSHHHHH
T ss_pred HEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 75898999998728999058878866511068988648378775777
No 132
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=61.42 E-value=1.4 Score=23.79 Aligned_cols=56 Identities=14% Similarity=0.161 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHC---------CCEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 789999999999998628---------96899976888776521--24677778899999999862998899
Q gi|254780820|r 138 IAAGEAIVKSCERAIAEK---------CPLVMFTASGGARMQEG--ILSLMQLPRTTIAINMLKDAGLPYIV 198 (284)
Q Consensus 138 ~~~geki~~a~e~A~~~~---------~PlI~~~~SGGaRMqEG--~~sL~qMakt~~a~~~l~~~~lP~I~ 198 (284)
+..++.|.+++-.+..++ -|.+++.---|....++ ..-|.+++ +.--.+.+.|++.
T Consensus 204 ~~~~~~i~~a~l~~~~~G~~~~g~~~~FP~~~~~i~~~~~~~~~~p~~dl~~~~-----~e~~ak~g~p~f~ 270 (605)
T 1h7b_A 204 DWTERMIQKAILKNRIKGLGRDGITPIFPKLVMFVEEGVNLYKDDPNYDIKQLA-----LECASKRMYPDII 270 (605)
T ss_dssp SHHHHHHHHHHHHHHHHCBTTTTBCCSCSEEEEEECTTTTSSTTSTTHHHHHHH-----HHHHHHHSCCEEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH-----HHHHHHHCCCHHH
T ss_conf 878899799999999717776888765531144541566678999860599999-----9998876670065
No 133
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=61.27 E-value=1.3 Score=24.08 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=29.7
Q ss_pred EECCCCCCEEEH---HHH--HHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 056676872217---889--86338388998962437999999845565420133456
Q gi|254780820|r 27 VKCPETGAMVYH---KDL--KENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQ 79 (284)
Q Consensus 27 ~kCp~C~~~i~~---~~l--~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~ 79 (284)
-.|..|+-.+-. .++ ......||+||. +||.++.|++...+.
T Consensus 199 ~~C~gC~~~l~~~~~~~~~~~~~i~~C~~CgR-----------iL~~~~~~~~~~~~~ 245 (256)
T 3na7_A 199 QACGGCFIRLNDKIYTEVLTSGDMITCPYCGR-----------ILYAEGAYESNAQPP 245 (256)
T ss_dssp TBCTTTCCBCCHHHHHHHHHSSSCEECTTTCC-----------EEECSCC--------
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEECCCCCC-----------EEEECCCCCCCCCCC
T ss_conf 91688782438999999885999048989997-----------785066343345993
No 134
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=60.91 E-value=2 Score=22.79 Aligned_cols=35 Identities=9% Similarity=0.327 Sum_probs=23.3
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHH
Q ss_conf 056676872217889863383889989624379999998
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKF 65 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~ 65 (284)
..||.|++.+... .+-.+|++| |+|.+...-++++
T Consensus 3 ~~CP~C~~~L~~~---~~~l~C~~~-h~fd~~k~Gyv~l 37 (269)
T 1p91_A 3 FSCPLCHQPLSRE---KNSYICPQR-HQFDMAKEGYVNL 37 (269)
T ss_dssp BBCTTTCCBCEEE---TTEEECTTC-CEEEBCTTSCEEC
T ss_pred EECCCCCCCCCCC---CCEEECCCC-CCCCCCCCCEEEC
T ss_conf 7488999210168---987983899-5216566845732
No 135
>3ojg_A Phosphotriesterase; (beta/alpha)8 barrel, lactonase, hydrolase; HET: KCX HL4; 1.60A {Geobacillus kaustophilus} PDB: 3f4c_A* 3f4d_A*
Probab=59.75 E-value=9.1 Score=17.88 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCC-CCCEEEEEEC
Q ss_conf 577899999999999986289689997688877652124677778899999999862998-89985676-4201111201
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLP-YIVVLTNP-TTGGVTASYA 213 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP-~I~vl~~p-t~GGv~AS~a 213 (284)
+....-+-+..+++.|.+.++|+++-+.. +++ + +- .+..+.+.+++ --+++.+- .++... ++
T Consensus 157 ~t~~e~~~f~a~~~~a~~tg~Pv~iH~~~--~~~--~---~e-------~~~~l~~~g~d~~~v~i~H~~~~~~~~--~~ 220 (330)
T 3ojg_A 157 ITEYEKMFFRAAARAQKETGAVIITHTQE--GTM--G---PE-------QAAYLLEHGADPKKIVIGHMCGNTDPD--YH 220 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCEEEEECST--TCC--H---HH-------HHHHHHHTTCCGGGEEECCGGGCCCHH--HH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEECCC--CCC--C---HH-------HHHHHHHCCCCCCCEEEEECCCCCCHH--HH
T ss_conf 99899999999999999829957997577--633--1---77-------899999738996676998079999899--99
Q ss_pred CCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCHHHH---HHHHCCCCCEEEC
Q ss_conf 46852555314211023278878763677887202159---9996898353735
Q gi|254780820|r 214 MLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQRSE---YLVEHGMIDRIVH 264 (284)
Q Consensus 214 ~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fqtae---~l~~~G~iD~iv~ 264 (284)
--+++.|+.|+|.|--- ...-..|.|+.+++ .+.+.|..|.|+=
T Consensus 221 ----~~~l~~G~~i~~d~~g~---~~~~~~~~d~~r~~~i~~lv~~g~~drILl 267 (330)
T 3ojg_A 221 ----RKTLAYGVYIAFDRFGI---QGMVGAPTDEERVRTLLALLRDGYEKQIML 267 (330)
T ss_dssp ----HHHHTTTCEEEECCTTC---CSSTTCCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred ----HHHHHCCCEEEECCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf ----99997497899666545---366779967899999999998578532998
No 136
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Probab=58.62 E-value=1.7 Score=23.31 Aligned_cols=86 Identities=22% Similarity=0.226 Sum_probs=49.7
Q ss_pred HHHHHHCCCEEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC---
Q ss_conf 9998628968999768887765212467777--88999999998629988998567642011112014685255531---
Q gi|254780820|r 149 ERAIAEKCPLVMFTASGGARMQEGILSLMQL--PRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEP--- 223 (284)
Q Consensus 149 e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qM--akt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep--- 223 (284)
+...+-..-.+-+....|.++|.|.....+. .....++.++.+..--+=.++|+-..||..|+.+.+ ++.--.|
T Consensus 88 d~~~dl~~~~~~~~~~~~~~VH~GF~~~~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~-~l~~~~~~~~ 166 (269)
T 1lgy_A 88 SAITDIVFNFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGM-DLYQREPRLS 166 (269)
T ss_dssp HHHHTCCCCEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHH-HHHHHCTTCS
T ss_pred HHHHHCCCCEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-HHHHHCCCCC
T ss_conf 999849561001247898088526899999999999999999998789965999535750888999999-9997285557
Q ss_pred ---CCEEECCCHHHH
Q ss_conf ---421102327887
Q gi|254780820|r 224 ---GAEIGFAGRRVI 235 (284)
Q Consensus 224 ---~a~igFaG~rVi 235 (284)
-..+.|+.|||=
T Consensus 167 ~~~i~v~tFG~PrvG 181 (269)
T 1lgy_A 167 PKNLSIFTVGGPRVG 181 (269)
T ss_dssp TTTEEEEEESCCCCB
T ss_pred CCCCEEEEECCCCCC
T ss_conf 887439985899757
No 137
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=58.13 E-value=7.9 Score=18.31 Aligned_cols=44 Identities=20% Similarity=0.499 Sum_probs=32.6
Q ss_pred CCCEECCCCCCE--EEHHHHHHHCCC--CCCCCCCEECCHHHHHHHHCCCCCCCCCC
Q ss_conf 601056676872--217889863383--88998962437999999845565420133
Q gi|254780820|r 24 NLWVKCPETGAM--VYHKDLKENQWV--ISSSDFHMKIPAKERLKFLFDNAKYCLLD 76 (284)
Q Consensus 24 ~lW~kCp~C~~~--i~~~~l~~n~~V--Cp~C~~H~rl~areRi~~l~D~gsf~Ei~ 76 (284)
-...-|| ||.. +...+|++..-| ||.|.-..|+ +||...|.+-.
T Consensus 21 ~~~ypCr-CGd~F~It~~dL~~ge~v~~C~sCSL~IrV--------ifd~e~~~~~~ 68 (89)
T 2jr7_A 21 TYFYPCP-CGDNFSITKEDLENGEDVATCPSCSLIIKV--------IYDKDQFVSGE 68 (89)
T ss_dssp EEEEECT-TSSEEEEEHHHHHHTCCEEECTTTCCEEEE--------ECCHHHHCCSS
T ss_pred EEEECCC-CCCEEEECHHHHHCCCEEEECCCCCCEEEE--------EECHHHCCCCC
T ss_conf 8985378-899889879998589949968999628999--------97577855555
No 138
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein structure initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=57.43 E-value=9.9 Score=17.61 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=56.9
Q ss_pred CCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCC---CCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEE
Q ss_conf 8899896243799999984556542013345687020186764---2035667766642166771699987870414999
Q gi|254780820|r 48 ISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDN---KKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVA 124 (284)
Q Consensus 48 Cp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~---k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv 124 (284)
|+.| -+|.+-++-|.++....-+..+.--=|.|.|+|. +.|.+|-+.+.+.-|. ..+-|-.--|||+.-+
T Consensus 54 CSSC-----PpAD~~L~~L~~~~dVi~La~HVdYWDylGWkD~Fa~~~~t~RQr~Ya~~~~~-~~vYTPq~VVnG~~~~- 126 (270)
T 2axo_A 54 CASC-----PPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGR-NGVYTPQAILNGRDHV- 126 (270)
T ss_dssp CTTC-----HHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTC-SCCCSSEEEETTTEEE-
T ss_pred CCCC-----HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCEEEEECEECC-
T ss_conf 9997-----88999999974489989999636631236987877696789999999986189-9884997999381356-
Q ss_pred EEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 998330318535778999999999999862896
Q gi|254780820|r 125 VVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCP 157 (284)
Q Consensus 125 ~~~df~F~GGSmG~~~geki~~a~e~A~~~~~P 157 (284)
.||= .+.+..+++.+....-|
T Consensus 127 --------~gs~----~~~~~~~i~~~~~~~~~ 147 (270)
T 2axo_A 127 --------KGAD----VRGIYDRLDAFKREGQG 147 (270)
T ss_dssp --------ETTC----HHHHHHHHHHHHHTTCS
T ss_pred --------CCCC----HHHHHHHHHHHHHCCCC
T ss_conf --------6578----78999999987721777
No 139
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.04 E-value=5.2 Score=19.65 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=25.1
Q ss_pred EECCCCCCEEEH--HHHHH-------HCCCCCCCCCCEECCHHHHHHHH
Q ss_conf 056676872217--88986-------33838899896243799999984
Q gi|254780820|r 27 VKCPETGAMVYH--KDLKE-------NQWVISSSDFHMKIPAKERLKFL 66 (284)
Q Consensus 27 ~kCp~C~~~i~~--~~l~~-------n~~VCp~C~~H~rl~areRi~~l 66 (284)
.+||.|+...|. ..|.. .-|.|+.|+.-|+-...-+.-+.
T Consensus 35 ~~C~~C~k~~f~~~~~l~~H~~~h~~~~~~C~~C~k~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred EECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHCC
T ss_conf 7999999354639999999998858979979985996676277998705
No 140
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.04 E-value=5.5 Score=19.48 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=27.8
Q ss_pred CCEECCC-CCCEEEHHHHHHHCCCCCC----CCC-----CEECCHHH
Q ss_conf 0105667-6872217889863383889----989-----62437999
Q gi|254780820|r 25 LWVKCPE-TGAMVYHKDLKENQWVISS----SDF-----HMKIPAKE 61 (284)
Q Consensus 25 lW~kCp~-C~~~i~~~~l~~n~~VCp~----C~~-----H~rl~are 61 (284)
.-+.||. |+..+...+|++-..+||+ |-| .+++.-.+
T Consensus 36 ~~i~C~~~Cg~~~~r~~l~~H~~~Cp~~~v~C~~~~~GC~~~~~r~~ 82 (100)
T 2yre_A 36 DLIGCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNK 82 (100)
T ss_dssp CEEECTTCCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESST
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHH
T ss_conf 23568886557202769999999848985228777899987413999
No 141
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase- inhibitor complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=56.92 E-value=2.7 Score=21.78 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=55.7
Q ss_pred CCCCCCCCEECCCCCCEEEHHHHHH---HCCCCCCCCCCEECCHHHH----------HHHHCCCCCCCCCCC--CCC-CC
Q ss_conf 2477460105667687221788986---3383889989624379999----------998455654201334--568-70
Q gi|254780820|r 19 RAIPENLWVKCPETGAMVYHKDLKE---NQWVISSSDFHMKIPAKER----------LKFLFDNAKYCLLDQ--PQV-CQ 82 (284)
Q Consensus 19 k~ip~~lW~kCp~C~~~i~~~~l~~---n~~VCp~C~~H~rl~areR----------i~~l~D~gsf~Ei~~--~~~-~~ 82 (284)
-.+|++- .-|++|++.+-..+... ....||+||..+...++-+ |.-.+..|.|-.+.. +.. ..
T Consensus 28 p~~p~~~-r~c~~Cg~~~~~~~~~~~~~~~~~c~~cg~~~~~~p~l~~G~~i~grY~i~~~lG~Gg~G~Vy~a~d~~~~~ 106 (681)
T 2pzi_A 28 PVVPESK-RFCWNCGRPVGRSDSETKGASEGWCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNG 106 (681)
T ss_dssp CCCCGGG-CBCTTTCCBCSCC-----CCSEEECTTTCCEEECSCSSCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTT
T ss_pred CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCEEEEEEEEECCCC
T ss_conf 9998767-665224895777778888766776888999677899999999889726997898417892899999837999
Q ss_pred HH-----CCCCCCCCHHHHH-HHHHHHCCC-CCCEEEEEEEE-----ECEEEEEEEEECHHHCCCCC
Q ss_conf 20-----1867642035667-766642166-77169998787-----04149999983303185357
Q gi|254780820|r 83 DP-----LKFRDNKKYIDRL-KENRSKTGL-IDSIVSAVGNV-----RDFKLVAVVHEFSFIGGSIG 137 (284)
Q Consensus 83 DP-----L~F~d~k~Y~drl-~~a~~kTg~-~davv~G~G~I-----~G~~vvv~~~df~F~GGSmG 137 (284)
.+ |.........+++ .+++--..+ +..|+.-++.. .+.+....+|+| .-|+|+-
T Consensus 107 ~~valK~l~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~~~~~~ylVmEy-v~G~~L~ 172 (681)
T 2pzi_A 107 RPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY-VGGQSLK 172 (681)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC-CCCEECC
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEC-CCCCCHH
T ss_conf 39999998812486899999999999985799698948899986787778505999958-8997299
No 142
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=56.87 E-value=6.7 Score=18.83 Aligned_cols=44 Identities=20% Similarity=0.493 Sum_probs=32.0
Q ss_pred CCEECCCCCCE--EEHHHHHHHCCC--CCCCCCCEECCHHHHHHHHCCCCCCCCCCC
Q ss_conf 01056676872--217889863383--889989624379999998455654201334
Q gi|254780820|r 25 LWVKCPETGAM--VYHKDLKENQWV--ISSSDFHMKIPAKERLKFLFDNAKYCLLDQ 77 (284)
Q Consensus 25 lW~kCp~C~~~--i~~~~l~~n~~V--Cp~C~~H~rl~areRi~~l~D~gsf~Ei~~ 77 (284)
...-|| ||.. +...+|++..-| ||.|.-+.|+ +||...|...+.
T Consensus 29 ~~ypCr-CGd~F~it~~dL~~ge~V~~C~sCSL~IrV--------iy~~e~~~~~~~ 76 (83)
T 1wge_A 29 YFYPCP-CGDNFAITKEDLENGEDVATCPSCSLIIKV--------IYDKDQFMCGET 76 (83)
T ss_dssp EEECCS-SSSCEEEEHHHHHTTCCEEECTTTCCEEEE--------ECCHHHHHTTTC
T ss_pred EEECCC-CCCEEEECHHHHHCCCCEEECCCCCCEEEE--------EECHHHHCCCCC
T ss_conf 985789-899898879998689919819998638999--------986478323552
No 143
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=56.76 E-value=2.1 Score=22.58 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=23.6
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEECC
Q ss_conf 105667687221788986338388998962437
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~ 58 (284)
+.-||.|+..+...+ +++.-+|+.|+.-|++.
T Consensus 10 iL~CP~ck~~L~~~~-~~~~L~c~~~~laYPI~ 41 (56)
T 2kpi_A 10 ILACPACHAPLEERD-AELICTGQDCGLAYPVR 41 (56)
T ss_dssp SCCCSSSCSCEEEET-TEEEECSSSCCCEEEEE
T ss_pred HHCCCCCCCCCEECC-CCCEEECCCCCEEEECC
T ss_conf 733889999451828-76889738888354450
No 144
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} SCOP: b.40.4.15 PDB: 3irb_A
Probab=56.75 E-value=3.2 Score=21.22 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=19.9
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 010566768722178898633838899896
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
+=.+|++|+...+-+. .+||+|+-.
T Consensus 46 ~~~rC~~Cg~~~~Ppr-----~~Cp~C~s~ 70 (145)
T 2gnr_A 46 IGSKCSKCGRIFVPAR-----SYCEHCFVK 70 (145)
T ss_dssp EEEECTTTCCEEESCC-----SEETTTTEE
T ss_pred EEEECCCCCCEEECCC-----CCCCCCCCC
T ss_conf 9998799995883960-----117799998
No 145
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=55.90 E-value=1.3 Score=24.15 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=24.3
Q ss_pred CEECCCCCCEEEHHHHHHHCCCC--CCCCCCEEC
Q ss_conf 10566768722178898633838--899896243
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVI--SSSDFHMKI 57 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VC--p~C~~H~rl 57 (284)
+..||+|+..+.+. -.=|...| +.|++||=-
T Consensus 6 tK~CP~C~~~IeK~-~GCnhm~C~~~~C~~~FCw 38 (60)
T 1wd2_A 6 TKECPKCHVTIEKD-GGCNHMVCRNQNCKAEFCW 38 (60)
T ss_dssp CCCCTTTCCCCSSC-CSCCSSSCCSSGGGSCCSS
T ss_pred CCCCCCCCCEEEEC-CCCCCEEECCCCCCCEEEC
T ss_conf 85996999988868-8988659789999980977
No 146
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Neisseria meningitidis Z2491}
Probab=54.67 E-value=1.7 Score=23.18 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=22.8
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
.-||.|+..+...+ +++--||+.|+.-|++
T Consensus 9 L~CP~ck~~L~~~~-~~~eLvc~~~~~~YPI 38 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQ-DKQELWSRQAKLAYPI 38 (68)
T ss_dssp CBCSSSCCBCEEET-TTTEEEETTTTEEEEE
T ss_pred HCCCCCCCEEEEEC-CCCEEECCCCCCCCCC
T ss_conf 07879898728968-8998971876965634
No 147
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIRON center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=54.48 E-value=2.8 Score=21.62 Aligned_cols=11 Identities=18% Similarity=0.003 Sum_probs=5.1
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999986289
Q gi|254780820|r 146 KSCERAIAEKC 156 (284)
Q Consensus 146 ~a~e~A~~~~~ 156 (284)
..++.|.+.+-
T Consensus 125 ~~a~~A~~eGd 135 (202)
T 1yuz_A 125 AFIRKAQEEGN 135 (202)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHCCC
T ss_conf 99999998698
No 148
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalytic subunit PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structural genomics; 1.41A {Yersinia pestis} PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=54.43 E-value=6.3 Score=19.04 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=30.1
Q ss_pred HHHHCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 9862896899976888-776521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGG-ARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGG-aRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+.-++| .-+..+.+|..||| .|+|.-++..+
T Consensus 86 Aa~T~~PVIgvP~~~~~l~G~d~llS~vqMP-----------~GvPVatv~i~ 127 (174)
T 3kuu_A 86 AAKTLVPVLGVPVQSAALSGVDSLYSIVQMP-----------RGIPVGTLAIG 127 (174)
T ss_dssp HHTCSSCEEEEEECCTTTTTHHHHHHHHTCC-----------TTSCCEECCSS
T ss_pred HHHCCCCEEECCCCCCCCCCCCHHHHHHHCC-----------CCCCCEEEECC
T ss_conf 6616543561134445667610388997187-----------88985688648
No 149
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=53.38 E-value=2.3 Score=22.27 Aligned_cols=25 Identities=16% Similarity=0.511 Sum_probs=17.5
Q ss_pred EECCCCCCEEEHHH----------------HHHHCCCCCCCCC
Q ss_conf 05667687221788----------------9863383889989
Q gi|254780820|r 27 VKCPETGAMVYHKD----------------LKENQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~----------------l~~n~~VCp~C~~ 53 (284)
..|..|+ .+|..+ |- ..|+||.|+-
T Consensus 36 y~C~~Cg-yiYDp~~Gd~~~gi~pGT~FedLP-~dw~CP~Cg~ 76 (87)
T 1s24_A 36 WICITCG-HIYDEALGDEAEGFTPGTRFEDIP-DDWCCPDCGA 76 (87)
T ss_dssp EEETTTT-EEEETTSCCTTTTCCSCCCGGGCC-TTCCCSSSCC
T ss_pred EECCCCC-CEECCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCC
T ss_conf 8899999-187666588455869999877889-9886849988
No 150
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=53.02 E-value=3.7 Score=20.79 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=39.5
Q ss_pred CCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEE-E-ECCCEEECCCHHHH
Q ss_conf 8887765212467777--88999999998629988998567642011112014685255-5-31421102327887
Q gi|254780820|r 164 SGGARMQEGILSLMQL--PRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHL-A-EPGAEIGFAGRRVI 235 (284)
Q Consensus 164 SGGaRMqEG~~sL~qM--akt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiii-a-ep~a~igFaG~rVi 235 (284)
..|.+.|.|.....+. .++...+.++.+..--+=.++|+-..||..|+.+.+ ++.- . .+-..+.|+.|||-
T Consensus 103 ~~~~~vH~GF~~~~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~-~l~~~~~~~i~~~tFG~PrvG 177 (279)
T 1tia_A 103 CDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAAT-DLRGKGYPSAKLYAYASPRVG 177 (279)
T ss_pred CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH-HHHHCCCCCEEEEEECCCCCC
T ss_conf 999497188999999999999999999986489955998456358999999999-998559984479984899747
No 151
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A
Probab=53.01 E-value=3.2 Score=21.26 Aligned_cols=26 Identities=31% Similarity=0.618 Sum_probs=19.5
Q ss_pred CCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 4774601056676872217889863383889989
Q gi|254780820|r 20 AIPENLWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 20 ~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
.+|...| +|..|+.. .|+|+|-.|||
T Consensus 29 ~~~~~~~-~C~~C~~~-------~~lW~CL~CG~ 54 (129)
T 2g45_A 29 RIPPCGW-KCSKCDMR-------ENLWLNLTDGS 54 (129)
T ss_dssp CCCCCBC-CCSSSSCC-------SSEEEETTTCC
T ss_pred CCCCCCC-CCCCCCCC-------CCEEEEEECCC
T ss_conf 3799888-45564886-------86489874787
No 152
>2c46_A MRNA capping enzyme; guanylyltransferase, phosphatase, transferase, alternative splicing, hydrolase, mRNA processing, multifunctional enzyme; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=52.67 E-value=4.2 Score=20.38 Aligned_cols=22 Identities=32% Similarity=0.816 Sum_probs=17.0
Q ss_pred CCCCCCCCCCCEECCCCCCEEEH
Q ss_conf 42224774601056676872217
Q gi|254780820|r 16 FGRRAIPENLWVKCPETGAMVYH 38 (284)
Q Consensus 16 ~~kk~ip~~lW~kCp~C~~~i~~ 38 (284)
.....+|++ |.+||.||+.|-.
T Consensus 23 ~~~n~iP~r-W~~~p~~g~~I~~ 44 (241)
T 2c46_A 23 MAHNKIPPR-WLNCPRRGQPVAG 44 (241)
T ss_dssp CTTCCCCTT-CTTSCSBCCCBTT
T ss_pred CCCCCCCCH-HHCCCCCCCCCCC
T ss_conf 103789814-2129987777689
No 153
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.55 E-value=5.5 Score=19.50 Aligned_cols=21 Identities=5% Similarity=0.132 Sum_probs=15.2
Q ss_pred CCCCCCCCCCEECCHHHHHHH
Q ss_conf 383889989624379999998
Q gi|254780820|r 45 QWVISSSDFHMKIPAKERLKF 65 (284)
Q Consensus 45 ~~VCp~C~~H~rl~areRi~~ 65 (284)
-..||+|+-||++.---|-.+
T Consensus 12 ~raCPkCn~~Fnl~dpLk~HM 32 (49)
T 2e72_A 12 RKICPRCNAQFRVTEALRGHM 32 (49)
T ss_dssp CCCCTTTCCCCSSHHHHHHHH
T ss_pred CCCCCCCCCEEECCHHHHHHH
T ss_conf 754874454245507776045
No 154
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=52.31 E-value=0.71 Score=26.04 Aligned_cols=134 Identities=18% Similarity=0.280 Sum_probs=57.2
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE--
Q ss_conf 185357789999999999998628968999768887765212467777889999999986299889985676420111--
Q gi|254780820|r 132 IGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVT-- 209 (284)
Q Consensus 132 ~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~-- 209 (284)
.+|+||...+-.+-.+. |. ..-|+|+++.=|+.-|. + .++....+.++|.+.|+.|.-.+|..
T Consensus 423 ~~g~mG~~l~~Aigaa~--a~-p~~~vv~i~GDgsf~~~--~----------~~L~ta~~~~~~i~iiv~NN~g~g~~~~ 487 (570)
T 2vbf_A 423 LWGSIGYTFPAALGSQI--AD-KESRHLLFIGDGSLQLT--V----------QELGLSIREKLNPICFIINNDGYTVERE 487 (570)
T ss_dssp TTCCTTTHHHHHHHHHH--HC-TTSEEEEEEEHHHHHHH--G----------GGHHHHHHTTCCCEEEEEESSSCHHHHH
T ss_pred CCCCCCCCCCHHHHHHH--HC-CCCCEEEEECHHHHHHH--H----------HHHHHHHHCCCCEEEEEEECCCCCEEEE
T ss_conf 65777766507888887--28-99978999891686332--9----------9999999809891999996898853460
Q ss_pred -----EEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCHHH--HHHHHC-C--CCCEEECHHHHHHHHHHHHHHH
Q ss_conf -----12014685255531421102327887876367788720215--999968-9--8353735899999999999997
Q gi|254780820|r 210 -----ASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQRS--EYLVEH-G--MIDRIVHRHDIPEVVSSLCKIL 279 (284)
Q Consensus 210 -----AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fqta--e~l~~~-G--~iD~iv~r~~l~~~i~~ll~il 279 (284)
.+|..+.++-++.=-.-.|..|-||.-.++ +-+++++.+ +.+.++ | +||..|+|.|.-..+.++-+.+
T Consensus 488 ~~~~~~~~~~~~~~d~~~~A~a~G~~~~~v~~~~v--~~~~el~~al~~a~~~~~~p~liev~vd~~~~~~~l~~~~~~~ 565 (570)
T 2vbf_A 488 IHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIV--RTENEFVSVMKEAQADVNRMYWIELVLEKEDAPKLLKKMGKLF 565 (570)
T ss_dssp HSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEE--CBHHHHHHHHHHHHHCTTSEEEEEEECCTTCCCHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCHHHHHHHCCCCEEEECEEEC--CCHHHHHHHHHHHHHCCCCEEEEEEEECHHHCCHHHHHHHHHH
T ss_conf 01686676879999999999987996065310210--8999999999999867998499999988065479999999999
Q ss_pred HCC
Q ss_conf 237
Q gi|254780820|r 280 TKS 282 (284)
Q Consensus 280 ~~~ 282 (284)
.+.
T Consensus 566 ~~~ 568 (570)
T 2vbf_A 566 AEQ 568 (570)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 974
No 155
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=52.13 E-value=2.1 Score=22.57 Aligned_cols=39 Identities=8% Similarity=0.310 Sum_probs=25.7
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHC
Q ss_conf 105667687221788986338388998962437999999845
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLF 67 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~ 67 (284)
..-||.|+..+...+ +++.-||+.|+.-|++ ++=|-.|+
T Consensus 8 iL~CP~ck~~L~~~~-~~~eLvc~~~~~aYPI--~dGIPvLL 46 (70)
T 2js4_A 8 ILVCPVCKGRLEFQR-AQAELVCNADRLAFPV--RDGVPIML 46 (70)
T ss_dssp CCBCTTTCCBEEEET-TTTEEEETTTTEEEEE--ETTEECCC
T ss_pred HHCCCCCCCEEEEEC-CCCEEECCCCCCCCCC--CCCCCCCC
T ss_conf 706879998726938-8998954864865634--38930308
No 156
>1tgl_A Triacyl-glycerol acylhydrolase; hydrolase(carboxylic esterase); 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=52.06 E-value=5.9 Score=19.26 Aligned_cols=71 Identities=21% Similarity=0.198 Sum_probs=37.9
Q ss_pred CCCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEE---CC---CEEECCCHHH
Q ss_conf 68887765212467777--8899999999862998899856764201111201468525553---14---2110232788
Q gi|254780820|r 163 ASGGARMQEGILSLMQL--PRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAE---PG---AEIGFAGRRV 234 (284)
Q Consensus 163 ~SGGaRMqEG~~sL~qM--akt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiae---p~---a~igFaG~rV 234 (284)
...|.++|.|.....+. ..+..++.++.+..--+=.++|+-..||..|+.+.+ ++.-.. +. ..+.|+.|||
T Consensus 101 ~~~~~~VH~GF~~~~~~~~~~i~~~i~~~~~~~~~~~i~~tGHSLGGAlA~l~a~-~l~~~~~~~~~~~i~~~TFG~Prv 179 (269)
T 1tgl_A 101 PVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCAL-DLYQREEGLSSSNLFLYTQGQPRV 179 (269)
T ss_pred CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH-HHHHHCCCCCCCCCCEEECCCCCC
T ss_conf 8999788299999999888899999999998689955787135678999999999-999734367766655355179975
No 157
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=51.06 E-value=2.1 Score=22.60 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=22.7
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
.-||.|+..+...+ +++--||+.|+.-|++
T Consensus 11 L~CP~~k~~L~~~~-~~~~Lvc~~~~~~YPI 40 (67)
T 2jny_A 11 LACPKDKGPLRYLE-SEQLLVNERLNLAYRI 40 (67)
T ss_dssp CBCTTTCCBCEEET-TTTEEEETTTTEEEEE
T ss_pred HCCCCCCCCCEEEC-CCCEEECCCCCCCCCC
T ss_conf 45879898406968-8998976876844735
No 158
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.34 E-value=6.8 Score=18.83 Aligned_cols=25 Identities=8% Similarity=0.093 Sum_probs=21.0
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCC
Q ss_conf 0105667687221788986338388
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVIS 49 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp 49 (284)
-+++|+-|++.+..++++.....||
T Consensus 9 R~v~C~~C~~~~~~~~~~~H~~~C~ 33 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQCP 33 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 2665999988115889999987589
No 159
>2waq_P DNA-directed RNA polymerase RPO12 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 3hkz_P
Probab=50.11 E-value=2.2 Score=22.46 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=21.6
Q ss_pred EECCCCCCEEEHHHHHHHCC-CCCCCCCCE
Q ss_conf 05667687221788986338-388998962
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQW-VISSSDFHM 55 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~-VCp~C~~H~ 55 (284)
.+|-.|+......||+.--- -||.|||-.
T Consensus 4 Y~C~rCg~~~~~~eL~~LP~IrCPyCGfri 33 (48)
T 2waq_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYKI 33 (48)
T ss_dssp --CCCCSSSCCCCCSCCCSSSSCTTTCCCC
T ss_pred EEECCCCCCCCHHHHHHCCCCCCCCCCCEE
T ss_conf 884136778068788457886446357189
No 160
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.04 E-value=10 Score=17.57 Aligned_cols=34 Identities=3% Similarity=0.063 Sum_probs=22.2
Q ss_pred CCCCCCCEECCCCCCEEEHH-------HHHH-HCCCCCCCCC
Q ss_conf 47746010566768722178-------8986-3383889989
Q gi|254780820|r 20 AIPENLWVKCPETGAMVYHK-------DLKE-NQWVISSSDF 53 (284)
Q Consensus 20 ~ip~~lW~kCp~C~~~i~~~-------~l~~-n~~VCp~C~~ 53 (284)
.-++.+|+.|..|..=.+.+ +... ..|+||.|--
T Consensus 21 ~~~~~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 21 YNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTT
T ss_pred CCCCCCEEECCCCCCEEEEEEECCCHHHCCCCCEEECCCCCC
T ss_conf 599975878899998504453154634368898389968808
No 161
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious disease, electron transport; NMR {Mycobacterium tuberculosis}
Probab=49.69 E-value=3 Score=21.44 Aligned_cols=26 Identities=15% Similarity=0.562 Sum_probs=17.4
Q ss_pred CEECCCCCCEEEHHH----------------HHHHCCCCCCCCC
Q ss_conf 105667687221788----------------9863383889989
Q gi|254780820|r 26 WVKCPETGAMVYHKD----------------LKENQWVISSSDF 53 (284)
Q Consensus 26 W~kCp~C~~~i~~~~----------------l~~n~~VCp~C~~ 53 (284)
=..|+.|+ .+|.++ |- ..|+||.|+-
T Consensus 27 ~y~C~~Cg-yiYDp~~GD~~~gippGT~F~dLP-~dw~CP~Cga 68 (81)
T 2kn9_A 27 LFRCIQCG-FEYDEALGWPEDGIAAGTRWDDIP-DDWSCPDCGA 68 (81)
T ss_dssp EEEETTTC-CEEETTTCBTTTTBCTTCCTTTSC-TTCCCTTTCC
T ss_pred EEECCCCC-EEECCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCC
T ss_conf 59829999-387666588456879889765789-8886929998
No 162
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=49.64 E-value=10 Score=17.44 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 535778999999999999862896899976
Q gi|254780820|r 134 GSIGIAAGEAIVKSCERAIAEKCPLVMFTA 163 (284)
Q Consensus 134 GSmG~~~geki~~a~e~A~~~~~PlI~~~~ 163 (284)
|-+|...-|-...|+++|.++++|++.+|-
T Consensus 75 gGFG~RG~eGkI~Ai~yARen~iPfLGICl 104 (273)
T 2w7t_A 75 GGFGNRGVDGKCAAAQVARMNNIPYFGVXL 104 (273)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHTCCEEEETH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 857877647899999999974886024556
No 163
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=49.60 E-value=9.9 Score=17.61 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=27.1
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 318535778999999999999862896899976
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTA 163 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~ 163 (284)
..-|-+|...-|-...|+++|.++++|++.+|-
T Consensus 95 lVPGGFG~RGieGkI~Ai~yARen~IPfLGICl 127 (289)
T 2v4u_A 95 LVPGGFGIRGTLGKLQAISWARTKKIPFLGVXL 127 (289)
T ss_dssp EECSCCSSTTHHHHHHHHHHHHHTTCCEEEETH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 968978877615899999999984997023567
No 164
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=49.16 E-value=6.3 Score=19.05 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=44.3
Q ss_pred EEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CC
Q ss_conf 499999833031853577899999999999986289689997-----688877652124677778899999999862-99
Q gi|254780820|r 121 KLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFT-----ASGGARMQEGILSLMQLPRTTIAINMLKDA-GL 194 (284)
Q Consensus 121 ~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~-----~SGGaRMqEG~~sL~qMakt~~a~~~l~~~-~l 194 (284)
.++|.+.=...+||||..-. +..+++...+.+..++.|. .|.|.. ........ -..++++.+++. ..
T Consensus 38 ~~~v~~Hph~~~Gg~~~~~~---~~~lA~~l~~~G~~vl~fd~rG~G~S~g~~--~~~~~~~~--D~~a~~~~l~~~~~~ 110 (220)
T 2fuk_A 38 VTAIVCHPLSTEGGSMHNKV---VTMAARALRELGITVVRFNFRSVGTSAGSF--DHGDGEQD--DLRAVAEWVRAQRPT 110 (220)
T ss_dssp EEEEEECSCTTTTCSTTCHH---HHHHHHHHHTTTCEEEEECCTTSTTCCSCC--CTTTHHHH--HHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCCCCCCCHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCCC--CCCHHHHH--HHHHHHHHHHHCCCC
T ss_conf 78999689998788899879---999999999789989996288868878988--87116999--999999999860788
Q ss_pred CEEEEECCCCCCEEEEEE
Q ss_conf 889985676420111120
Q gi|254780820|r 195 PYIVVLTNPTTGGVTASY 212 (284)
Q Consensus 195 P~I~vl~~pt~GGv~AS~ 212 (284)
..+.+ .+-++||..|..
T Consensus 111 ~~v~l-~G~S~Gg~va~~ 127 (220)
T 2fuk_A 111 DTLWL-AGFSFGAYVSLR 127 (220)
T ss_dssp SEEEE-EEETHHHHHHHH
T ss_pred CCEEE-EEECHHHHHHHH
T ss_conf 86699-986618999999
No 165
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=48.47 E-value=6.9 Score=18.78 Aligned_cols=27 Identities=11% Similarity=0.191 Sum_probs=13.5
Q ss_pred EECCCCCCEEEHHHH------HHHCCCCCCCCC
Q ss_conf 056676872217889------863383889989
Q gi|254780820|r 27 VKCPETGAMVYHKDL------KENQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l------~~n~~VCp~C~~ 53 (284)
.+||.|+...-.-|. ....++|..|+.
T Consensus 15 y~Cp~C~k~ys~Lda~~Lld~~~~~F~C~~C~~ 47 (62)
T 1vd4_A 15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHT 47 (62)
T ss_dssp EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCC
T ss_pred EECCCCCCEECHHHHHHHCCCCCCEEEECCCCC
T ss_conf 388898888237559883596789197368899
No 166
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=48.36 E-value=7.3 Score=18.58 Aligned_cols=57 Identities=21% Similarity=0.259 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH--H---------HCCCCEEEEEC
Q ss_conf 853577899999999999986289689997688877652124677778899999999--8---------62998899856
Q gi|254780820|r 133 GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML--K---------DAGLPYIVVLT 201 (284)
Q Consensus 133 GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l--~---------~~~lP~I~vl~ 201 (284)
-|-+|...-|--..|+++|.++++|+..+|-+ ||+|-+-.|-+-+ + +..-|.|.++.
T Consensus 357 PGGFG~RGiEGkI~Ai~yAREn~IPfLGICLG------------mQ~AVIEfARnVlgl~dAnStEf~~~t~~pVI~lm~ 424 (535)
T 3nva_A 357 LPGFGSRGAEGKIKAIKYAREHNIPFLGICFG------------FQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLD 424 (535)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHHTCCEEEETHH------------HHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH------------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 79876565148999999998649980214432------------489999999985599887643357789998899622
No 167
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.05 E-value=5.7 Score=19.39 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=26.8
Q ss_pred CEECCCCCCEEEH--HHHHHH---------CCCCCCCCCCEECCHHHHHHH
Q ss_conf 1056676872217--889863---------383889989624379999998
Q gi|254780820|r 26 WVKCPETGAMVYH--KDLKEN---------QWVISSSDFHMKIPAKERLKF 65 (284)
Q Consensus 26 W~kCp~C~~~i~~--~~l~~n---------~~VCp~C~~H~rl~areRi~~ 65 (284)
=..||.|+...|+ ..|... -|.|+.|+.-|.-...-+.-+
T Consensus 24 ~~~C~~C~k~~~~~~~~L~~H~~~~h~~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred CEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHH
T ss_conf 989999997305589999999998628988999919798018469999996
No 168
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=47.78 E-value=2.7 Score=21.75 Aligned_cols=35 Identities=11% Similarity=0.314 Sum_probs=25.4
Q ss_pred CCCC--CCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECC
Q ss_conf 7746--0105667687221788986338388998962437
Q gi|254780820|r 21 IPEN--LWVKCPETGAMVYHKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 21 ip~~--lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~ 58 (284)
+|.+ +=..||.|+..+.- ....+-|..|..+|++-
T Consensus 25 ~~~~~~Me~~CP~Cq~~L~~---~~g~~hC~~C~~~f~~~ 61 (101)
T 2jne_A 25 VPRGSHMELHCPQCQHVLDQ---DNGHARCRSCGEFIEMK 61 (101)
T ss_dssp ------CCCBCSSSCSBEEE---ETTEEEETTTCCEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCEE---CCCCEECHHHHHHHHHE
T ss_conf 65888410458556881224---79979967776556761
No 169
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=47.60 E-value=14 Score=16.53 Aligned_cols=65 Identities=23% Similarity=0.306 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH----------------HHCCCCEEEEECCC
Q ss_conf 99999999999986289689997688877652124677778899999999----------------86299889985676
Q gi|254780820|r 140 AGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML----------------KDAGLPYIVVLTNP 203 (284)
Q Consensus 140 ~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l----------------~~~~lP~I~vl~~p 203 (284)
.-+-+.++++.+.+.++-+|+= =+|| |.|-++|..+++... .+..+|.|+|.|-+
T Consensus 91 ~~~~v~~~~~~~r~~~~D~IIa-vGGG--------S~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~Pli~iPTta 161 (408)
T 1oj7_A 91 AYETLMNAVKLVREQKVTFLLA-VGGG--------SVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLP 161 (408)
T ss_dssp BHHHHHHHHHHHHHHTCCEEEE-EESH--------HHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEE-CCCC--------CHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999997559988998-0896--------343334542231148742015665412554456788823455656
Q ss_pred CCCEEEEEEC
Q ss_conf 4201111201
Q gi|254780820|r 204 TTGGVTASYA 213 (284)
Q Consensus 204 t~GGv~AS~a 213 (284)
.||.-..+++
T Consensus 162 gTgSE~t~~a 171 (408)
T 1oj7_A 162 ATGSESNAGA 171 (408)
T ss_dssp SSCGGGSSEE
T ss_pred CCCCCCCCCE
T ss_conf 6544514643
No 170
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=47.47 E-value=5.5 Score=19.50 Aligned_cols=26 Identities=15% Similarity=0.432 Sum_probs=13.6
Q ss_pred EECCCCCCEEEHHHHHH--------HCCCCCCCCC
Q ss_conf 05667687221788986--------3383889989
Q gi|254780820|r 27 VKCPETGAMVYHKDLKE--------NQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~--------n~~VCp~C~~ 53 (284)
..|..|+ .+|.++..+ .-|+||.|+.
T Consensus 5 y~C~~Cg-yiYdp~~GdGt~F~~lp~dw~CP~C~a 38 (46)
T 6rxn_A 5 YVCNVCG-YEYDPAEHDNVPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp EEETTTC-CEECGGGGTTCCGGGSCTTCBCTTTCC
T ss_pred EECCCCC-EEECCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 5969999-287774379988778898876849988
No 171
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A*
Probab=47.44 E-value=14 Score=16.51 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCEEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEE-CCCCC
Q ss_conf 7169998787041499999833031853577899999999999986-289689997-68887
Q gi|254780820|r 108 DSIVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFT-ASGGA 167 (284)
Q Consensus 108 davv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~-~SGGa 167 (284)
-...+.+|+.+|.+|+++..- ||.+... .+++..+. .+.-.|+.. .+||-
T Consensus 43 r~~~~ytG~~~g~~V~v~~~G-------iG~~~aa---~~~~eLi~~~~~~~iI~~GtaG~l 94 (235)
T 1z34_A 43 RGIQGYTGTYKGKPISVMGHG-------MGLPSIC---IYAEELYSTYKVKTIIRVGTCGAI 94 (235)
T ss_dssp GGCCEEEEEETTEEEEEEECC-------SSHHHHH---HHHHHHHHTSCCCEEEEEEEEEEC
T ss_pred CCEEEEEEEECCEEEEEEECC-------CCHHHHH---HHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 784899999999999999889-------7889999---999999984798489993544445
No 172
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=47.37 E-value=2.6 Score=21.89 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=21.2
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 056676872217889863383889989624379
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
..||.|+..+-- ..+.+-|+.|..+|++-+
T Consensus 3 ~~CP~Cq~~L~~---~~~~~hC~~C~~~~~~~a 32 (81)
T 2jrp_A 3 ITCPVCHHALER---NGDTAHCETCAKDFSLQA 32 (81)
T ss_dssp CCCSSSCSCCEE---CSSEEECTTTCCEEEEEE
T ss_pred CCCCCCCCCCEE---CCCCEECHHHHHHHHHEE
T ss_conf 878777894244---699778067664466466
No 173
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=46.90 E-value=9.2 Score=17.85 Aligned_cols=19 Identities=21% Similarity=0.487 Sum_probs=9.7
Q ss_pred CEECC-CCCCEEEHHHHHHH
Q ss_conf 10566-76872217889863
Q gi|254780820|r 26 WVKCP-ETGAMVYHKDLKEN 44 (284)
Q Consensus 26 W~kCp-~C~~~i~~~~l~~n 44 (284)
.+.|| .|+..+.++++++-
T Consensus 16 ~v~C~~~C~~~i~r~~l~~H 35 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAH 35 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTT
T ss_pred ECCCCCCCCCHHHHHHHHHH
T ss_conf 34776120449689899866
No 174
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthesis, NESG, structural genomics, PSI-2; 1.90A {Chromobacterium violaceum atcc 12472} SCOP: b.171.1.1
Probab=46.84 E-value=2.7 Score=21.82 Aligned_cols=30 Identities=10% Similarity=0.311 Sum_probs=21.7
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
.-||.|+..+...+ +++.-||+.|+.-|++
T Consensus 9 L~CP~ck~~L~~~~-~~~~Lvc~~~~laYPI 38 (68)
T 2hf1_A 9 LVCPLCKGPLVFDK-SKDELICKGDRLAFPI 38 (68)
T ss_dssp CBCTTTCCBCEEET-TTTEEEETTTTEEEEE
T ss_pred HCCCCCCCEEEEEC-CCCEEECCCCCCCCCC
T ss_conf 36879898617928-8998964887955545
No 175
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=46.19 E-value=9 Score=17.89 Aligned_cols=34 Identities=12% Similarity=0.335 Sum_probs=24.3
Q ss_pred EECCCCCCEEE--HH-HHHHHCCCCCCCCCCEECCHH
Q ss_conf 05667687221--78-898633838899896243799
Q gi|254780820|r 27 VKCPETGAMVY--HK-DLKENQWVISSSDFHMKIPAK 60 (284)
Q Consensus 27 ~kCp~C~~~i~--~~-~l~~n~~VCp~C~~H~rl~ar 60 (284)
.+|++|+..+- -+ +...+.|+|+-|++.-.++..
T Consensus 56 ~RC~~C~ayiNpf~~~~~~~~~W~C~~C~~~N~~p~~ 92 (768)
T 1m2o_A 56 CSGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQ 92 (768)
T ss_dssp CCSTTTCCBCCTTSCEETTTTEECCTTTCCCCBCCGG
T ss_pred CCCCCCCCEECCCEEEECCCCEEECCCCCCCCCCCHH
T ss_conf 4589871585784499689998984479982899734
No 176
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp}
Probab=46.07 E-value=11 Score=17.20 Aligned_cols=41 Identities=24% Similarity=0.430 Sum_probs=28.3
Q ss_pred HHHHCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 9862896899976888-776521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGG-ARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGG-aRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+.-++| .....+.+|+.||| .|+|.-++..+
T Consensus 79 a~~t~~PVIgVP~~~~~l~G~d~llS~vqMP-----------~GvPVatvavg 120 (166)
T 3oow_A 79 AAKTTLPVLGVPVKSSTLNGQDSLLSIVQMP-----------AGIPVATFAIG 120 (166)
T ss_dssp HHTCSSCEEEEECCCTTTTTHHHHHHHHTCC-----------TTSCCEECCST
T ss_pred HHCCCCCEEEECCCCCCCCCCCHHHHHHHCC-----------CCCCCEEEECC
T ss_conf 6636888686304545677721289997098-----------78984478627
No 177
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4KFT4, structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens pf-5} SCOP: b.171.1.1
Probab=45.71 E-value=2.5 Score=21.98 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=21.7
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
.-||.|++.+...+ +++.-||+.|+.-|++
T Consensus 9 L~CP~ck~~L~~~~-~~~~Lvc~~~~~~YPI 38 (69)
T 2pk7_A 9 LACPICKGPLKLSA-DKTELISKGAGLAYPI 38 (69)
T ss_dssp CCCTTTCCCCEECT-TSSEEEETTTTEEEEE
T ss_pred HCCCCCCCEEEEEC-CCCEEECCCCCCEEEC
T ss_conf 16879999706968-8997976987835233
No 178
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C*
Probab=45.55 E-value=2.7 Score=21.72 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=22.9
Q ss_pred CCEECCCCCCE--EEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 01056676872--217889863383889989624379
Q gi|254780820|r 25 LWVKCPETGAM--VYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 25 lW~kCp~C~~~--i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
-++.||.|+.. .+.++=...+-.|..||..-.+.+
T Consensus 102 ~yVlC~~C~spdT~l~k~~r~~~l~C~aCGa~~~V~~ 138 (139)
T 3cw2_K 102 AYVECSTCKSLDTILKKEKKSWYIVCLACGAQTPVKP 138 (139)
T ss_dssp CCSSCCSSSSSCCCSCSSCSTTTSSCCC---------
T ss_pred HEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCCC
T ss_conf 7789999999730899958838998057999986888
No 179
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=45.20 E-value=2.1 Score=22.54 Aligned_cols=31 Identities=10% Similarity=0.024 Sum_probs=21.0
Q ss_pred EECCCCCCEE---E------HHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722---1------78898633838899896243
Q gi|254780820|r 27 VKCPETGAMV---Y------HKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i---~------~~~l~~n~~VCp~C~~H~rl 57 (284)
.+||+|+..- + .+|=.-.++.|.+|||..|.
T Consensus 10 ~kC~kC~~~~~~~~~~QtRSADEp~T~F~~C~~Cg~~Wr~ 49 (50)
T 1tfi_A 10 FTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 49 (50)
T ss_dssp SCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEEEC
T ss_pred EECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCCEEE
T ss_conf 7998978995589988730798885499990106871270
No 180
>2ha9_A UPF0210 protein SP0239; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.70A {Streptococcus pneumoniae} SCOP: c.7.1.5
Probab=44.95 E-value=15 Score=16.25 Aligned_cols=95 Identities=21% Similarity=0.391 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHCCCEEEE----ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-----CCCCEEEEEEC
Q ss_conf 9999999998628968999----76888776521246777788999999998629988998567-----64201111201
Q gi|254780820|r 143 AIVKSCERAIAEKCPLVMF----TASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN-----PTTGGVTASYA 213 (284)
Q Consensus 143 ki~~a~e~A~~~~~PlI~~----~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~-----pt~GGv~AS~a 213 (284)
.+...+-.|+...--+-.. +.-.|. .+.+.-.|+++.-.+.++..-+---++|+.| |-+-| +|-
T Consensus 129 ~lI~siP~aL~~T~~vcssvNv~st~~GI----NmdAv~~~~~iIk~~A~~t~~g~aklvVfaN~~~d~PFmpg---a~H 201 (446)
T 2ha9_A 129 ILINSIPRALAETDKVCSSVNIGSTKSGI----NMTAVADMGRIIKETANLSDMGVAKLVVFANAVEDNPFMAG---AFH 201 (446)
T ss_dssp HHHHHHHHHHHSCSSEEEEEECEETTTEE----EHHHHHHHHHHHHHHHTTCSSGGGGEEEEESCCTTCCSCC----CCC
T ss_pred HHHHHHHHHHHHHCCEEEEEEECCCCCCC----CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC---CCC
T ss_conf 89999999986307156777642665676----78999999999999973496662458997489989997887---667
Q ss_pred CCCCEEEEECCC--EEECCCHHHHHHHHCCCCCCCCHH
Q ss_conf 468525553142--110232788787636778872021
Q gi|254780820|r 214 MLGDIHLAEPGA--EIGFAGRRVIEQTVREKLPDGFQR 249 (284)
Q Consensus 214 ~lgDiiiaep~a--~igFaG~rVi~~t~~~~lp~~fqt 249 (284)
. ..||.+ ++|++||.|+++.+.+--.++|++
T Consensus 202 g-----~ge~d~~inVGvsgPgvV~~al~~~~~~~~~~ 234 (446)
T 2ha9_A 202 G-----VGEADVIINVGVSGPGVVKRALEKVRGQSFDV 234 (446)
T ss_dssp C-----TTSCSEEEEEEECCHHHHHHHHHTTTTCCHHH
T ss_pred C-----CCCCCEEEEEECCCCHHHHHHHHHHHCCCHHH
T ss_conf 7-----88876289995158569999999721698899
No 181
>1q68_B Proto-oncogene tyrosine-protein kinase LCK; peptide-peptide complex, helix-helix interaction, zinc coordination, beta hairpin; NMR {Homo sapiens} SCOP: j.108.1.1 PDB: 1q69_B
Probab=44.38 E-value=7.1 Score=18.69 Aligned_cols=17 Identities=24% Similarity=0.218 Sum_probs=13.4
Q ss_pred HHHHHHHCCCCCCCCCC
Q ss_conf 78898633838899896
Q gi|254780820|r 38 HKDLKENQWVISSSDFH 54 (284)
Q Consensus 38 ~~~l~~n~~VCp~C~~H 54 (284)
..|+-+|..||.+|.|.
T Consensus 4 eddw~enidvcenchyp 20 (29)
T 1q68_B 4 EDDWLENIDVCENCHYP 20 (29)
T ss_dssp SSHHHHTCCCCSSSCSC
T ss_pred HHHHHHHHHHHHCCCCC
T ss_conf 26666643666327875
No 182
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=43.49 E-value=16 Score=16.09 Aligned_cols=80 Identities=14% Similarity=0.067 Sum_probs=40.8
Q ss_pred ECHHHCCCCCHHHHHHHHHHHHHHH--------HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 3303185357789999999999998--------62896899976888776521246777788999999998629988998
Q gi|254780820|r 128 EFSFIGGSIGIAAGEAIVKSCERAI--------AEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVV 199 (284)
Q Consensus 128 df~F~GGSmG~~~geki~~a~e~A~--------~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~v 199 (284)
|--|+|=++-...-+....+.|.+. ..++.++++..|...= ..+.+|..++ ..+.|.|.|
T Consensus 184 ~IV~FGE~lP~~~~~~~~~~~e~~~~~~~~~~~~~~~DlliviGTSL~V--~Pa~~l~~~~----------~~~~~~viI 251 (361)
T 1q14_A 184 AIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV--YPFASLPEEI----------PRKVKRVLC 251 (361)
T ss_dssp EECCBTSCCCHHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCS--TTGGGHHHHS----------CTTSEEEEE
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE--CCHHHHHHHH----------HCCCCEEEE
T ss_conf 7877689787478999999888889999876530468999997968754--1876779999----------749988999
Q ss_pred ECCCCCCEEEEEECCCCCEEEE
Q ss_conf 5676420111120146852555
Q gi|254780820|r 200 LTNPTTGGVTASYAMLGDIHLA 221 (284)
Q Consensus 200 l~~pt~GGv~AS~a~lgDiiia 221 (284)
-..||.... .+-...|+.|-
T Consensus 252 N~e~~~~~~--~~~~~~Dl~i~ 271 (361)
T 1q14_A 252 NLETVGDFK--ANKRPTDLIVH 271 (361)
T ss_dssp SSSCCHHHH--HTCCTTCEEEC
T ss_pred ECCCCCCCC--CCCCCCCEEEE
T ss_conf 799788876--67887548995
No 183
>2exu_A Transcription initiation protein SPT4/SPT5; helixs surrounding beta sheet; 2.23A {Saccharomyces cerevisiae}
Probab=42.82 E-value=9.7 Score=17.67 Aligned_cols=26 Identities=8% Similarity=0.086 Sum_probs=22.4
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 0566768722178898633838899896
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
.-|-.|+-+.-...+.++ -||+|+.-
T Consensus 5 rAC~~C~lI~t~~qf~~~--gCpnC~~~ 30 (200)
T 2exu_A 5 RACMLCGIVQTTNEFNRD--GCPNCQGI 30 (200)
T ss_dssp EEETTTCBEEEHHHHHHH--CCTTTHHH
T ss_pred CHHHHCCCEECHHHHCCC--CCCCCCCH
T ss_conf 045519955014241357--99997002
No 184
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=42.71 E-value=16 Score=16.01 Aligned_cols=92 Identities=22% Similarity=0.277 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf 03566776664216677169998787041499999833031853577899999999999986289689997688877652
Q gi|254780820|r 92 KYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQE 171 (284)
Q Consensus 92 ~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqE 171 (284)
++-+++.+.-++.|..-.+ +..+. +...-+.+.++++.+.+.+..+| +.-+||
T Consensus 56 g~~~~v~~~L~~~~i~~~v---f~~v~------------------~~p~~~~v~~~~~~~~~~~~D~I-vavGGG----- 108 (371)
T 1o2d_A 56 GSLDDLKKLLDETEISYEI---FDEVE------------------ENPSFDNVMKAVERYRNDSFDFV-VGLGGG----- 108 (371)
T ss_dssp SHHHHHHHHHHHTTCEEEE---EEEEC------------------SSCBHHHHHHHHHHHTTSCCSEE-EEEESH-----
T ss_pred HHHHHHHHHHHHCCCEEEE---ECCCC------------------CCCCHHHHHHHHHHHHHCCCCEE-EEECCC-----
T ss_conf 5999999999876985999---68866------------------89799999999999985499889-982897-----
Q ss_pred CHHHHHHHHHHHHHHHH-------------HHHCCCCEEEEECCCCCCEEEEEEC
Q ss_conf 12467777889999999-------------9862998899856764201111201
Q gi|254780820|r 172 GILSLMQLPRTTIAINM-------------LKDAGLPYIVVLTNPTTGGVTASYA 213 (284)
Q Consensus 172 G~~sL~qMakt~~a~~~-------------l~~~~lP~I~vl~~pt~GGv~AS~a 213 (284)
|.|-.+|..+.+.. .....+|+|+|-|-+.+|.-+..++
T Consensus 109 ---s~iD~aK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagtgse~t~~a 160 (371)
T 1o2d_A 109 ---SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYS 160 (371)
T ss_dssp ---HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCCEE
T ss_pred ---CCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf ---6120899999998579971443057655346788688237445664457765
No 185
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; TM0446, structural genomics, JCSG, PSI, protein structure initiative; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=42.55 E-value=14 Score=16.60 Aligned_cols=41 Identities=22% Similarity=0.415 Sum_probs=26.9
Q ss_pred HHHHCCCEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 98628968999768887-76521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGGA-RMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGGa-RMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+..++|. ....+.+|.+||+ +|+|.-+|.-|
T Consensus 87 A~~t~~PVIgVP~~~~~~~G~daLlS~lqMP-----------~gvpVatV~Id 128 (183)
T 1o4v_A 87 ASITHLPVIGVPVKTSTLNGLDSLFSIVQMP-----------GGVPVATVAIN 128 (183)
T ss_dssp HHHCSSCEEEEEECCTTTTTHHHHHHHHTCC-----------TTCCCEECCTT
T ss_pred EEECCCEEEEECCCCCCCCCHHHHHHHHHCC-----------CCCCEEEEECC
T ss_conf 8732611786115777887677788760188-----------88876777547
No 186
>1s1i_9 L37A, YL35, 60S ribosomal protein L43; 80S ribosome, 60S ribosomal subunit, EEF2, tRNA translocation, sordarin, cryo-EM; 11.70A {Saccharomyces cerevisiae} SCOP: i.1.1.1
Probab=42.44 E-value=6.2 Score=19.09 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=27.1
Q ss_pred CCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 24774601056676872217889863383889989624379
Q gi|254780820|r 19 RAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 19 k~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
-++...-=.+||-|+..--++ ..--.|.|.+|++-|-=.|
T Consensus 28 ie~~q~aky~Cp~Cgk~~vkR-~a~GIW~C~kC~~~~AGGA 67 (91)
T 1s1i_9 28 LEIQQHARYDCSFCGKKTVKR-GAAGIWTCSCCKKTVAGGA 67 (91)
T ss_dssp SCSSSSSCCCCTTTCSSCCCE-ETTTEECCSSSCCCEECCS
T ss_pred HHHHHCCCCCCCCCCCCEEEE-EEEEEEECCCCCCEEECCC
T ss_conf 999956882398999973489-9888868799998886774
No 187
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA- directed RNA polymerase, primosome, late protein; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=42.27 E-value=5.3 Score=19.62 Aligned_cols=28 Identities=7% Similarity=0.154 Sum_probs=18.5
Q ss_pred ECCCCCCE----EEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 56676872----217889863383889989624379
Q gi|254780820|r 28 KCPETGAM----VYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 28 kCp~C~~~----i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
-||.||+- +|. +..+=|-+||++.....
T Consensus 16 pCP~Cg~~d~~~~~~----dg~~~C~~Cg~~~~~~~ 47 (255)
T 1nui_A 16 PCDNCGSSDGNSLFS----DGHTFCYVCEKWTAGNE 47 (255)
T ss_dssp CCSSSCCSSCEEEET----TSCEEETTTCCEEC---
T ss_pred CCCCCCCCCCCEEEE----CCCEEECCCCCCCCCCC
T ss_conf 999898999987952----99889767998447876
No 188
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 1gt6_A*
Probab=42.01 E-value=2.6 Score=21.86 Aligned_cols=84 Identities=19% Similarity=0.121 Sum_probs=42.8
Q ss_pred HHHHCCCEEEEE-CCCCCCCCCCHHHHHHHH--HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEE-EECCCE
Q ss_conf 986289689997-688877652124677778--8999999998629988998567642011112014685255-531421
Q gi|254780820|r 151 AIAEKCPLVMFT-ASGGARMQEGILSLMQLP--RTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHL-AEPGAE 226 (284)
Q Consensus 151 A~~~~~PlI~~~-~SGGaRMqEG~~sL~qMa--kt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiii-aep~a~ 226 (284)
..+-....+-+. ...|.++|.|.....+.. .+...+.++.+..--+=.++|+-..||..|+.+.+ ++.. ..+-..
T Consensus 90 ~~Dl~~~~~~~~~~~~~~~VH~GF~~~~~~~~~~i~~~v~~~~~~~~~~~l~vtGHSLGgalA~l~a~-~l~~~~~~v~v 168 (269)
T 1tib_A 90 IGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGA-DLRGNGYDIDV 168 (269)
T ss_dssp HTCCCCCEEECTTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH-HHTTSSSCEEE
T ss_pred HHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH-HHHHCCCCCEE
T ss_conf 98568563644214899677075999999999999999999998789965898316778999999999-98735887308
Q ss_pred EECCCHHHH
Q ss_conf 102327887
Q gi|254780820|r 227 IGFAGRRVI 235 (284)
Q Consensus 227 igFaG~rVi 235 (284)
+.|+.|||-
T Consensus 169 ~tFg~PrvG 177 (269)
T 1tib_A 169 FSYGAPRVG 177 (269)
T ss_dssp EEESCCCCB
T ss_pred EEECCCCCC
T ss_conf 984898657
No 189
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=41.52 E-value=5 Score=19.81 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=12.7
Q ss_pred CEECCCCCCEE----EHHHHHHHCCCCCCCCCCEE
Q ss_conf 10566768722----17889863383889989624
Q gi|254780820|r 26 WVKCPETGAMV----YHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 26 W~kCp~C~~~i----~~~~l~~n~~VCp~C~~H~r 56 (284)
.+-|+.|+-.+ |.+.+++....||.|...|+
T Consensus 35 f~~C~~Cgh~~C~~C~~~~~~~~~~~CP~CR~~yk 69 (93)
T 1weo_A 35 FVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 65666467667399999999857996878785131
No 190
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A*
Probab=41.46 E-value=13 Score=16.70 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=22.0
Q ss_pred CCCCCEECCCCCCEEEHHHH--------------HHHCCCCCCCCC
Q ss_conf 74601056676872217889--------------863383889989
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDL--------------KENQWVISSSDF 53 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l--------------~~n~~VCp~C~~ 53 (284)
.++-|+.|..|+.-.+..=. ..-.|+||.|--
T Consensus 17 ~~~~~i~Cd~C~~w~H~~C~~~~~~~~~~~~~~~~~~~y~C~~C~~ 62 (183)
T 3lqh_A 17 YESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 62 (183)
T ss_dssp TTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCC
T ss_pred CCCCEEECCCCCCCCCHHHCCCCHHHHHHHHCCCCCCEEECCCCCC
T ss_conf 9987776599984227121699777887652379998688988889
No 191
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=41.14 E-value=5 Score=19.78 Aligned_cols=51 Identities=20% Similarity=0.444 Sum_probs=28.3
Q ss_pred CCCCCCEECCCCCCEEEHHH----------------HHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf 77460105667687221788----------------98633838899896243799999984556542013345687020
Q gi|254780820|r 21 IPENLWVKCPETGAMVYHKD----------------LKENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDP 84 (284)
Q Consensus 21 ip~~lW~kCp~C~~~i~~~~----------------l~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DP 84 (284)
+.++. ..|..|+- +|.++ |- ..|+||.|+. .+..|+.+... +
T Consensus 3 ~~~~k-y~C~~Cgy-iYDp~~Gd~~~gIppGT~F~dLP-~dw~CP~C~a--------------~K~~F~~i~~~-----~ 60 (70)
T 1dx8_A 3 IDEGK-YECEACGY-IYEPEKGDKFAGIPPGTPFVDLS-DSFMCPACRS--------------PKNQFKSIKKV-----I 60 (70)
T ss_dssp CCSSC-EEETTTCC-EECTTTCCTTTTCCSSCCGGGSC-TTCBCTTTCC--------------BGGGEEECCCB-----C
T ss_pred CCCCC-EEECCCCE-EECCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCC--------------CHHHHEECCCC-----C
T ss_conf 67884-78199990-87866678466879889967888-9877919998--------------58880274343-----5
Q ss_pred CCCCCCCCH
Q ss_conf 186764203
Q gi|254780820|r 85 LKFRDNKKY 93 (284)
Q Consensus 85 L~F~d~k~Y 93 (284)
-.|...-.|
T Consensus 61 agf~eN~~y 69 (70)
T 1dx8_A 61 AGFAENQKY 69 (70)
T ss_dssp CCSCCCSCC
T ss_pred CCCHHHCCC
T ss_conf 781243346
No 192
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalytic subunit; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=40.98 E-value=8.5 Score=18.10 Aligned_cols=42 Identities=21% Similarity=0.334 Sum_probs=29.1
Q ss_pred HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 98628968999768887765212467777889999999986299889985676
Q gi|254780820|r 151 AIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNP 203 (284)
Q Consensus 151 A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~p 203 (284)
|-...+|+|.+.-+++--.....+|-.||| .|+|.-+|..|.
T Consensus 70 A~~t~~PVIgVP~~~~~~G~daLlS~vqmP-----------~GvpVatv~I~~ 111 (157)
T 2ywx_A 70 ASLTTKPVIAVPVDAKLDGLDALLSSVQMP-----------PGIPVATVGIDR 111 (157)
T ss_dssp HTTCSSCEEEEEECSSGGGHHHHHHHHSCC-----------TTSCCEECCTTC
T ss_pred HHCCCCCCEECCCCCCCCHHHHHHHHHCCC-----------CCCCEEEEECCC
T ss_conf 870799757556678866799999986167-----------899657764575
No 193
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=40.98 E-value=3.3 Score=21.09 Aligned_cols=34 Identities=12% Similarity=0.270 Sum_probs=24.5
Q ss_pred CEECCCCCCEEE--HHHHHHHCCCCCCCCCCEECCH
Q ss_conf 105667687221--7889863383889989624379
Q gi|254780820|r 26 WVKCPETGAMVY--HKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 26 W~kCp~C~~~i~--~~~l~~n~~VCp~C~~H~rl~a 59 (284)
=..|.+|+..+- -+-.+.+.|+|+-|++...++.
T Consensus 85 ~~RC~~C~AYiNp~~~~~~~~~w~C~~C~~~N~lP~ 120 (751)
T 3eh1_A 85 IVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPE 120 (751)
T ss_dssp CCBCTTTCCBCCTTCEESSSSEEECTTTCCEEECCG
T ss_pred CCCCCCCCCEECCCEEECCCCEEECCCCCCCCCCCH
T ss_conf 982798738888737884799898247998689986
No 194
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.74 E-value=6.6 Score=18.89 Aligned_cols=13 Identities=15% Similarity=0.041 Sum_probs=8.4
Q ss_pred CCCCCCCCCEECC
Q ss_conf 8388998962437
Q gi|254780820|r 46 WVISSSDFHMKIP 58 (284)
Q Consensus 46 ~VCp~C~~H~rl~ 58 (284)
.-||.|++.|+-+
T Consensus 10 ~KCPyCd~~F~kn 22 (37)
T 2elp_A 10 MKCPYCDFYFMKN 22 (37)
T ss_dssp EECSSSSCEECSS
T ss_pred CCCCCHHHHHHHC
T ss_conf 1487016888505
No 195
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide mutase); acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=40.50 E-value=5.1 Score=19.75 Aligned_cols=41 Identities=20% Similarity=0.364 Sum_probs=26.8
Q ss_pred HHHHCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 9862896899976888-776521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGG-ARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGG-aRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+.-+.| --...+.+|..||+ .|+|.-++..+
T Consensus 95 a~~t~~PVIgvP~~~~~l~G~DsLlS~vqMP-----------~GvPvatvavg 136 (182)
T 1u11_A 95 AAWTRLPVLGVPVESRALKGMDSLLSIVQMP-----------GGVPVGTLAIG 136 (182)
T ss_dssp HHHCSSCEEEEEECCTTTTTHHHHHHHHCCC-----------TTSCCEECCSS
T ss_pred CCCCCCCEEEEECCCCCCCCCCCHHHHHHCC-----------CCCCCEEEEEC
T ss_conf 0146885899845667787633088997576-----------48983588725
No 196
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=40.42 E-value=18 Score=15.77 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=62.8
Q ss_pred HCCCCCCCCCCCCCCC---CHHCCCCCC----CCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCH
Q ss_conf 4556542013345687---020186764----203566776664216677169998787041499999833031853577
Q gi|254780820|r 66 LFDNAKYCLLDQPQVC---QDPLKFRDN----KKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGI 138 (284)
Q Consensus 66 l~D~gsf~Ei~~~~~~---~DPL~F~d~----k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~ 138 (284)
+|.+|.+.++...+.. ..+|-..|. .++-+++.+.-+..|.. +.+ ..|--+.
T Consensus 13 ~fG~g~~~~l~~~~~~~G~k~vlvv~~~~~~~~g~~~~i~~~L~~~gi~--------------~~v-------f~~v~~~ 71 (386)
T 1rrm_A 13 WFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLA--------------WAI-------YDGVVPN 71 (386)
T ss_dssp EESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCE--------------EEE-------ECBCCSS
T ss_pred EECCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCE--------------EEE-------ECCCCCC
T ss_conf 6987699999999997699879999897756582799999999875983--------------999-------8784799
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH---------------HCCCCEEEEECCC
Q ss_conf 8999999999999862896899976888776521246777788999999998---------------6299889985676
Q gi|254780820|r 139 AAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLK---------------DAGLPYIVVLTNP 203 (284)
Q Consensus 139 ~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~---------------~~~lP~I~vl~~p 203 (284)
..-+.+.++++.+.+.+..+|+= -+|| |-|-++|..+.+.... ..++|.|+|-|-+
T Consensus 72 pt~~~v~~~~~~~~~~~~D~Iia-vGGG--------s~iD~aK~va~~~~~~~~~~~~~~~~~~~~~~~~lP~i~VPTta 142 (386)
T 1rrm_A 72 PTITVVKEGLGVFQNSGADYLIA-IGGG--------SPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEE-EESH--------HHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCCCEEEE-CCCC--------CCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEECCCC
T ss_conf 79999999865550358887997-6886--------41048999999853864320344303565557877579604766
Q ss_pred CCCE
Q ss_conf 4201
Q gi|254780820|r 204 TTGG 207 (284)
Q Consensus 204 t~GG 207 (284)
.||.
T Consensus 143 gtgs 146 (386)
T 1rrm_A 143 GTAA 146 (386)
T ss_dssp SCCT
T ss_pred CCCC
T ss_conf 5533
No 197
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=39.97 E-value=18 Score=15.72 Aligned_cols=69 Identities=17% Similarity=0.344 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE-EECCCCCCE
Q ss_conf 577899999999999986289689997688877652124677778899999999862998899-856764201
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIV-VLTNPTTGG 207 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~-vl~~pt~GG 207 (284)
.+.-...-...+++.|..++..+|++-..| |+|-...-+.+|.+...++..+... -|.-+ +..+.++|.
T Consensus 172 ~~~dp~~v~~~~~~~A~~~~~DvvlIDTaG--R~~~d~~lm~el~ki~~~~~~~~~~-~p~e~~LVlda~~gq 241 (320)
T 1zu4_A 172 LNADPASVVFDAIKKAKEQNYDLLLIDTAG--RLQNKTNLMAELEKMNKIIQQVEKS-APHEVLLVIDATTGQ 241 (320)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEEECCC--CGGGHHHHHHHHHHHHHHHHTTCTT-CCSEEEEEEEGGGTH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEECCCC--CCCCCHHHHHHHHHHHHHHHHCCCC-CCCEEEEEEECCCCC
T ss_conf 788879999999999997799989963756--6767788999999999998740368-995479984145682
No 198
>3bvo_A CO-chaperone protein HSCB, mitochondrial precursor; structural genomics medical relevance, protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=39.81 E-value=5.1 Score=19.75 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=28.6
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 0105667687221788986338388998962437999999845565420133456
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQ 79 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~ 79 (284)
--..|.+|+..+.... .+...|++||.-.+... +.+-|+.++-+.
T Consensus 9 ~~~~cw~c~~~~~~~~--~~~~~C~~c~~~q~~~~--------~~dyy~iLgl~~ 53 (207)
T 3bvo_A 9 NYPRCWNCGGPWGPGR--EDRFFCPQCRALQAPDP--------TRDYFSLMDCNR 53 (207)
T ss_dssp --CBCSSSCCBCCSSC--SCCCBCTTTCCBCCCCT--------TCCHHHHTTSCS
T ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC--------CCCHHHHCCCCC
T ss_conf 9998999989866567--65752565566799988--------888799809898
No 199
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=39.78 E-value=5.5 Score=19.47 Aligned_cols=25 Identities=24% Similarity=0.679 Sum_probs=13.6
Q ss_pred EECCCCCCEEEHH----------------HHHHHCCCCCCCCC
Q ss_conf 0566768722178----------------89863383889989
Q gi|254780820|r 27 VKCPETGAMVYHK----------------DLKENQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~----------------~l~~n~~VCp~C~~ 53 (284)
..|+.|+ .+|.+ +|-+ -|+||.|+.
T Consensus 4 y~C~~Cg-yiYdp~~Gd~~~gi~pGT~F~~LP~-dw~CP~C~a 44 (54)
T 4rxn_A 4 YTCTVCG-YIYDPEDGDPDDGVNPGTDFKDIPD-DWVCPLCGV 44 (54)
T ss_dssp EEETTTC-CEECTTTCBGGGTBCTTCCGGGSCT-TCBCTTTCC
T ss_pred EECCCCC-CEECCCCCCCCCCCCCCCCHHHCCC-CCCCCCCCC
T ss_conf 5939999-0877554884568798999788899-888939989
No 200
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.62 E-value=7.2 Score=18.64 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=25.0
Q ss_pred EECCCCCCEEEHHH-H--------HHHCCCCCCCCCCEECCHHHHHH
Q ss_conf 05667687221788-9--------86338388998962437999999
Q gi|254780820|r 27 VKCPETGAMVYHKD-L--------KENQWVISSSDFHMKIPAKERLK 64 (284)
Q Consensus 27 ~kCp~C~~~i~~~~-l--------~~n~~VCp~C~~H~rl~areRi~ 64 (284)
.+|+.|+.....+. | .++.|.|+.|++-|.-...-+.-
T Consensus 19 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~y~C~~C~k~F~~~~~L~~H 65 (77)
T 2cot_A 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65 (77)
T ss_dssp SBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHH
T ss_conf 08999999858766748999860788887589888861888999999
No 201
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=39.38 E-value=18 Score=15.74 Aligned_cols=65 Identities=23% Similarity=0.329 Sum_probs=42.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH--H---------HCCCCEEEEEC
Q ss_conf 853577899999999999986289689997688877652124677778899999999--8---------62998899856
Q gi|254780820|r 133 GGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML--K---------DAGLPYIVVLT 201 (284)
Q Consensus 133 GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l--~---------~~~lP~I~vl~ 201 (284)
-|-+|...-|--..|+++|.++++|+..+|-+ ||++-+-.|-+-+ + +..-|.|.++.
T Consensus 362 PGGFG~RGiEGKI~Ai~yARen~IPfLGICLG------------mQ~avIEfARNVlgl~dAnStEfd~~t~~pVI~lm~ 429 (550)
T 1vco_A 362 PGGFGVRGIEGKVRAAQYARERKIPYLGICLG------------LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMP 429 (550)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH------------HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC------------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECH
T ss_conf 17787677458999999898739984200122------------469999999984499999855779999997798654
Q ss_pred C----CCCCEEE
Q ss_conf 7----6420111
Q gi|254780820|r 202 N----PTTGGVT 209 (284)
Q Consensus 202 ~----pt~GGv~ 209 (284)
. --.||+.
T Consensus 430 eq~~~~~~GGTM 441 (550)
T 1vco_A 430 EQLEVEGLGGTM 441 (550)
T ss_dssp GGGCC---CCCC
T ss_pred HHCCCCCCCCCC
T ss_conf 632157755431
No 202
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A 1rwd_A 1qcv_A 2pve_A 2pvx_A ...
Probab=39.02 E-value=6.2 Score=19.09 Aligned_cols=25 Identities=28% Similarity=0.699 Sum_probs=14.3
Q ss_pred EECCCCCCEEEHHH----------------HHHHCCCCCCCCC
Q ss_conf 05667687221788----------------9863383889989
Q gi|254780820|r 27 VKCPETGAMVYHKD----------------LKENQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~----------------l~~n~~VCp~C~~ 53 (284)
.+|..|+ .+|.++ |- ..|+||-|+.
T Consensus 3 y~C~~Cg-yiYdp~~Gd~~~~i~pGT~F~~LP-~dw~CP~C~a 43 (52)
T 1yk4_A 3 LSCKICG-YIYDEDEGDPDNGISPGTKFEDLP-DDWVCPLCGA 43 (52)
T ss_dssp EEESSSS-CEEETTTCBGGGTBCTTCCGGGSC-TTCBCTTTCC
T ss_pred CCCCCCC-EEECCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCC
T ss_conf 4869999-388876688466869999978889-9887949988
No 203
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus dsm 3638} PDB: 2dcu_B*
Probab=38.55 E-value=3.2 Score=21.20 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=17.4
Q ss_pred CCEECCCCCCE--EEHHHHHHHCCCCCCCCCCEECC
Q ss_conf 01056676872--21788986338388998962437
Q gi|254780820|r 25 LWVKCPETGAM--VYHKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 25 lW~kCp~C~~~--i~~~~l~~n~~VCp~C~~H~rl~ 58 (284)
-++.||.|+.. .+.++=...+-.|..||..-.+.
T Consensus 103 ~yVlC~~C~spdT~l~k~~r~~~l~C~aCGa~~~V~ 138 (148)
T 2d74_B 103 EYVICPVCGSPDTKIIKRDRFHFLKCEACGAETPIQ 138 (148)
T ss_dssp HHSSCSSSCCTTCCCCBSSSSBCCCCSSSCCCCCCC
T ss_pred HEEECCCCCCCCCEEEEECCEEEEEECCCCCCCCHH
T ss_conf 589999999974099995880999805689998507
No 204
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* 3ag3_F* ...
Probab=38.48 E-value=8.2 Score=18.20 Aligned_cols=17 Identities=24% Similarity=0.157 Sum_probs=12.7
Q ss_pred HHHCCCCCCCCCCEECC
Q ss_conf 86338388998962437
Q gi|254780820|r 42 KENQWVISSSDFHMKIP 58 (284)
Q Consensus 42 ~~n~~VCp~C~~H~rl~ 58 (284)
+.+-.-||.||++|+|-
T Consensus 76 ~g~p~RC~eCG~~fkL~ 92 (98)
T 1v54_F 76 KGEAQRCPSCGTHYKLV 92 (98)
T ss_dssp SSSCEECTTTCCEEEEE
T ss_pred CCCCCCCCCCCCEEEEE
T ss_conf 79963458778589986
No 205
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis}
Probab=38.39 E-value=16 Score=16.09 Aligned_cols=41 Identities=29% Similarity=0.447 Sum_probs=27.7
Q ss_pred HHHHCCCEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 98628968999768887-76521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGGA-RMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGGa-RMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+.-++|. -...+.+|..||| .|+|.-+|.-|
T Consensus 81 A~~t~~PVIgvP~~~~~~~g~dallS~vqMP-----------~GvpVatv~I~ 122 (174)
T 3lp6_A 81 AAATPLPVIGVPVPLGRLDGLDSLLSIVQMP-----------AGVPVATVSIG 122 (174)
T ss_dssp HHHCSSCEEEEEECCSSGGGHHHHHHHHCCC-----------TTCCCEECCTT
T ss_pred HHCCCCCEEECCCCCCCCCCCCHHHHHHHCC-----------CCCCEEEEECC
T ss_conf 5546887794557767767732077798589-----------98866777537
No 206
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=38.32 E-value=2.3 Score=22.36 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=19.8
Q ss_pred CCEECCCCCCE--EEHHHHHHHCCCCCCCCCCEECC
Q ss_conf 01056676872--21788986338388998962437
Q gi|254780820|r 25 LWVKCPETGAM--VYHKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 25 lW~kCp~C~~~--i~~~~l~~n~~VCp~C~~H~rl~ 58 (284)
-++.||.|+.. .+.++=...+-.|..||....+.
T Consensus 101 ~yVlC~~C~~pdT~l~k~~r~~~l~C~aCGa~~~V~ 136 (138)
T 1nee_A 101 KFVICHECNRPDTRIIREGRISLLKCEACGAKAPLK 136 (138)
T ss_dssp HHHHHTCCSSCSSCCEEETTTTEEECSTTSCCCCSC
T ss_pred HEEECCCCCCCCEEEEEECCEEEEECCCCCCCCCCC
T ss_conf 778999999985089995892899814689998567
No 207
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=38.31 E-value=19 Score=15.54 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=13.2
Q ss_pred HHHHCCCCCEEE--CHHHHHHH-HHHHHHHHH
Q ss_conf 999689835373--58999999-999999972
Q gi|254780820|r 252 YLVEHGMIDRIV--HRHDIPEV-VSSLCKILT 280 (284)
Q Consensus 252 ~l~~~G~iD~iv--~r~~l~~~-i~~ll~il~ 280 (284)
-.++.|.+...| +..++-.. +..+++.+.
T Consensus 231 ~~i~~G~i~~tv~q~~~~~G~~av~~l~~~l~ 262 (289)
T 3brs_A 231 QYLEEGIFEAMVVQKPFNIGYLGVEKALKLLK 262 (289)
T ss_dssp ----CCSCCEEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC
T ss_conf 99875996299948999999999999999976
No 208
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open active site loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=37.84 E-value=0.36 Score=28.28 Aligned_cols=125 Identities=17% Similarity=0.273 Sum_probs=60.9
Q ss_pred ECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCE
Q ss_conf 33031853577899999999999986289689997688877652124677778899999999862998899856764201
Q gi|254780820|r 128 EFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGG 207 (284)
Q Consensus 128 df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GG 207 (284)
.+.-||++++.+.|-++. ....|++++..=|+.=| .+- +|......++|.+.|+.|.-.+|
T Consensus 420 ~~g~iG~~l~~Aiga~~a-------~~~~~vv~i~GDgsf~~--~~~----------eL~ta~~~~~pi~ivV~NN~g~g 480 (565)
T 2nxw_A 420 YYAGMGFGVPAGIGAQCV-------SGGKRILTVVGDGAFQM--TGW----------ELGNCRRLGIDPIVILFNNASWE 480 (565)
T ss_dssp TTCCTTCHHHHHHHHHHH-------TTTCCEEEEEEHHHHHH--HGG----------GGGGHHHHTCCCEEEEEECSBCH
T ss_pred CCCCCCCCCHHHHHHHHH-------CCCCEEEEEECCHHHCC--CHH----------HHHHHHHHCCCCEEEEEECCCCH
T ss_conf 656677761589999970-------99980899988247404--799----------99999982989199999899773
Q ss_pred EE------EEECCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCHHH--HHHHHCC---CCCEEECHHHHHHHHHHHH
Q ss_conf 11------12014685255531421102327887876367788720215--9999689---8353735899999999999
Q gi|254780820|r 208 VT------ASYAMLGDIHLAEPGAEIGFAGRRVIEQTVREKLPDGFQRS--EYLVEHG---MIDRIVHRHDIPEVVSSLC 276 (284)
Q Consensus 208 v~------AS~a~lgDiiiaep~a~igFaG~rVi~~t~~~~lp~~fqta--e~l~~~G---~iD~iv~r~~l~~~i~~ll 276 (284)
.. ..|..+.++-++.=-.-.|+.|-+| +. |++|..+ +.+-..| +|+.+++|.+..+.+..++
T Consensus 481 ~~~~~q~~~~~~~~~~~d~~~~A~a~G~~~~~v---~~----~~el~~al~~a~~~~~~~~liev~vd~~~~~~~~~~~~ 553 (565)
T 2nxw_A 481 MLRTFQPESAFNDLDDWRFADMAAGMGGDGVRV---RT----RAELKAALDKAFATRGRFQLIEAMIPRGVLSDTLARFV 553 (565)
T ss_dssp HHHHHCTTCGGGBCCCCCHHHHTGGGTSEEEEE---CB----HHHHHHHHHHHHHCCSSCEEEEEECCTTCCCHHHHHHH
T ss_pred HHEHHCCCCCCCCCCCCCHHHHHHHCCCEEEEE---CC----HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH
T ss_conf 143015567778899999999999779869997---99----99999999999844797399999808764778999987
Q ss_pred HH
Q ss_conf 99
Q gi|254780820|r 277 KI 278 (284)
Q Consensus 277 ~i 278 (284)
.-
T Consensus 554 ~~ 555 (565)
T 2nxw_A 554 QG 555 (565)
T ss_dssp HH
T ss_pred HH
T ss_conf 61
No 209
>3n9n_A Putative uncharacterized protein; methylation, demethylase, PHD, JMJC, Fe(II) and ALP (alpha-ketoglutarate)-dependent dioxygenase family, oxidore; HET: M3L MLY OGA; 2.30A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A*
Probab=37.81 E-value=11 Score=17.37 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=21.3
Q ss_pred CCCCEECCCCCCEEEHH-------HH-HHHCCCCCCCCCCE
Q ss_conf 46010566768722178-------89-86338388998962
Q gi|254780820|r 23 ENLWVKCPETGAMVYHK-------DL-KENQWVISSSDFHM 55 (284)
Q Consensus 23 ~~lW~kCp~C~~~i~~~-------~l-~~n~~VCp~C~~H~ 55 (284)
+-.|++|..|..=.+.. +. .-..|.||+|--++
T Consensus 55 ~~~WI~Cd~C~~WfH~~Cv~~~~~~~~~id~y~C~~C~~~~ 95 (528)
T 3n9n_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TTEEEECTTTCCEEEGGGSSCCGGGTTTEEECCCTTTGGGT
T ss_pred CCCEEECCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 88567279999878524589872034777178993985678
No 210
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.68 E-value=7.1 Score=18.66 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=24.0
Q ss_pred CEECCCCCCEEEHHHHHHHC-------CCCCCCCCCEEC
Q ss_conf 10566768722178898633-------838899896243
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQ-------WVISSSDFHMKI 57 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~-------~VCp~C~~H~rl 57 (284)
.++|+.|+..+...+|+.-. ..||.|+--++.
T Consensus 17 ~~~C~~C~~~~~~~~l~~H~~~C~~~~~~C~~C~~~~~r 55 (75)
T 2d9k_A 17 LAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 55 (75)
T ss_dssp CEECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCEEET
T ss_pred CEECCCCCCEECCCHHHHHHHHCCCCCEECCCCCEECCH
T ss_conf 807899987677211767986379977748986928528
No 211
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.44 E-value=19 Score=15.44 Aligned_cols=46 Identities=11% Similarity=0.033 Sum_probs=29.2
Q ss_pred CCCCCCCCEECCCCCCEEEHHH-H------HHHCCCCCCCCCCEECCHHHHHH
Q ss_conf 2477460105667687221788-9------86338388998962437999999
Q gi|254780820|r 19 RAIPENLWVKCPETGAMVYHKD-L------KENQWVISSSDFHMKIPAKERLK 64 (284)
Q Consensus 19 k~ip~~lW~kCp~C~~~i~~~~-l------~~n~~VCp~C~~H~rl~areRi~ 64 (284)
+.+.+.-+.+|..|+..+.... | -...|.|+.|+.-|.-...-+.-
T Consensus 9 ~~~~~~~~f~C~~C~~~F~~~~~l~~H~~~h~~~~~C~~C~~~F~~~~~l~~H 61 (107)
T 1wjp_A 9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEH 61 (107)
T ss_dssp CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHH
T ss_conf 98999978359498995678899997831769896989998843788999999
No 212
>2zkr_z 60S ribosomal protein L37A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1ysh_D
Probab=37.23 E-value=2.9 Score=21.59 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=23.1
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 010566768722178898633838899896243
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
-=..||.|+..-.++. .--.|.|.+|++-|-=
T Consensus 35 ~ky~Cp~Cgk~~vkR~-a~GIW~C~kC~~~~AG 66 (92)
T 2zkr_z 35 AKYTCSFCGKTKMKRR-AVGIWHCGSCMKTVAG 66 (92)
T ss_dssp SCBCCSSSCSSCEEEE-ETTEEEETTTCCEEEC
T ss_pred CCCCCCCCCCCEEEEE-EEEEEECCCCCCEEEC
T ss_conf 7850999999877889-9888684799998856
No 213
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=37.04 E-value=11 Score=17.35 Aligned_cols=125 Identities=11% Similarity=0.038 Sum_probs=65.8
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCC-CCHHHHHHHHHHHCCCCCCEE-------------EEEEEEECEEEE
Q ss_conf 799999984556542013345687020186764-203566776664216677169-------------998787041499
Q gi|254780820|r 58 PAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDN-KKYIDRLKENRSKTGLIDSIV-------------SAVGNVRDFKLV 123 (284)
Q Consensus 58 ~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~-k~Y~drl~~a~~kTg~~davv-------------~G~G~I~G~~vv 123 (284)
.+-+|....++.| =.-|+-...|.||-...-+ ....+|++...+.+...-.+. .|.-.+++....
T Consensus 75 d~v~~Ak~~ve~G-ADiIdIg~~StrPg~~~vs~eee~~rV~~V~~~v~~pl~i~~~~~d~~d~~v~~~al~~~~~~~~l 153 (310)
T 2h9a_B 75 DPVAWAKKCVEYG-ADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCL 153 (310)
T ss_dssp CHHHHHHHHHHTT-CSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6999999999729-988997151189998878999999999999998689807423424466499999999973510356
Q ss_pred EEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 99983303185357789999999999998628968999768887765212467777889999999986299889985676
Q gi|254780820|r 124 AVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNP 203 (284)
Q Consensus 124 v~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~p 203 (284)
+ +.+..+..-..++.|.+.++|+|.... ++ +-.|-|+ ..++.++|+|.=-++.||
T Consensus 154 i------------~~~~~~n~~~m~~~a~~~~~pvi~~~~------~d-~~~~k~l------~~~l~~~GI~~~~IilDP 208 (310)
T 2h9a_B 154 L------------SSATKDNYKPIVATCMVHGHSVVASAP------LD-INLSKQL------NIMIMEMNLAPNRIIMDP 208 (310)
T ss_dssp E------------EEECTTTHHHHHHHHHHHTCEEEEECS------SC-HHHHHHH------HHHHHTTTCCGGGEEEEC
T ss_pred C------------CCCCCCCHHHHHHHHHHCCCCEEEECC------CC-HHHHHHH------HHHHHHCCCCHHHEEEEC
T ss_conf 2------------335400148999999982998999878------53-8999999------999998699977889815
Q ss_pred CCCEE
Q ss_conf 42011
Q gi|254780820|r 204 TTGGV 208 (284)
Q Consensus 204 t~GGv 208 (284)
.+||.
T Consensus 209 Gig~f 213 (310)
T 2h9a_B 209 LIGAL 213 (310)
T ss_dssp CCCCT
T ss_pred CCCCC
T ss_conf 76434
No 214
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=36.97 E-value=16 Score=16.13 Aligned_cols=26 Identities=15% Similarity=-0.006 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 99999999999862896899976888
Q gi|254780820|r 141 GEAIVKSCERAIAEKCPLVMFTASGG 166 (284)
Q Consensus 141 geki~~a~e~A~~~~~PlI~~~~SGG 166 (284)
.+.+...++...+++.++..++..+.
T Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~~~~ 112 (288)
T 1nrw_A 87 KKRAYDILSWLESENYYYEVFTGSAI 112 (288)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSCE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCEE
T ss_conf 89999999999976962899708758
No 215
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=36.71 E-value=3 Score=21.40 Aligned_cols=71 Identities=10% Similarity=0.052 Sum_probs=40.0
Q ss_pred CCCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEE-CCCEEECCCHHH
Q ss_conf 68887765212467777--8899999999862998899856764201111201468525553-142110232788
Q gi|254780820|r 163 ASGGARMQEGILSLMQL--PRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAE-PGAEIGFAGRRV 234 (284)
Q Consensus 163 ~SGGaRMqEG~~sL~qM--akt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiae-p~a~igFaG~rV 234 (284)
..++.+++.|.....+. .++...+.++.+..--+=.++|+-..||..|+.+.+ ++.... +-..+.|+.|||
T Consensus 90 ~~~~~~VH~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGAlA~l~a~-~l~~~~~~i~~~tFG~Prv 163 (261)
T 1uwc_A 90 QCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAA-QLSATYDNVRLYTFGEPRS 163 (261)
T ss_dssp TSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHH-HHHTTCSSEEEEEESCCCC
T ss_pred CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH-HHHHCCCCEEEEEECCCCC
T ss_conf 8998598426999999999999999999997789945998345741788999999-9985389812898469987
No 216
>2owo_A DNA ligase; protein/DNA complex, ligase/DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli K12}
Probab=36.54 E-value=6.7 Score=18.83 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=24.9
Q ss_pred EECCCCCCEEEHHHHHHHCCCCC--CCCCCEECCHHHHHHHHCCC
Q ss_conf 05667687221788986338388--99896243799999984556
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVIS--SSDFHMKIPAKERLKFLFDN 69 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp--~C~~H~rl~areRi~~l~D~ 69 (284)
..||+|+..+...+=+..+++|+ .| +--..+||.+++-.
T Consensus 406 ~~CP~c~~~l~~~~~~~~~~c~n~~~C----~aq~~~~i~hF~sk 446 (671)
T 2owo_A 406 THCPVCGSDVERVEGEAVARCTGGLIC----GAQRKESLKHFVSR 446 (671)
T ss_dssp SBCTTTCCBEEECTTCSCEEECCGGGC----HHHHHHHHHHHHST
T ss_pred CCCCCCCCEEEEECCCEEEEECCCCCC----HHHHHHHHHHHHHH
T ss_conf 889988975577469734896898763----89999999999875
No 217
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=36.51 E-value=7 Score=18.70 Aligned_cols=19 Identities=16% Similarity=0.489 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHCCCCEEEE
Q ss_conf 8999999998629988998
Q gi|254780820|r 181 RTTIAINMLKDAGLPYIVV 199 (284)
Q Consensus 181 kt~~a~~~l~~~~lP~I~v 199 (284)
|+...+.++.+.++|.|.|
T Consensus 297 K~p~~Va~~ak~~vPviai 315 (371)
T 1to6_A 297 KAPIGVAKRTPVGVPVVAI 315 (371)
T ss_dssp CHHHHHHTTSCTTCCEEEE
T ss_pred CHHHHHHHHHHCCCCEEEE
T ss_conf 7899999997679988999
No 218
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidase, aspartyl phosphatase; 2.40A {Thermotoga maritima MSB8} SCOP: d.194.1.3
Probab=36.21 E-value=20 Score=15.31 Aligned_cols=81 Identities=17% Similarity=0.152 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHCCCE--EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE-CCCCC
Q ss_conf 999999999998628968--999768887765212467777889999999986299889985676420111120-14685
Q gi|254780820|r 141 GEAIVKSCERAIAEKCPL--VMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASY-AMLGD 217 (284)
Q Consensus 141 geki~~a~e~A~~~~~Pl--I~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~-a~lgD 217 (284)
-..+-.+++.-.+.+..- +-.---|||+|-++...=..---+.+|.+-|++.|+|.++--++-..| =+-.| ...|+
T Consensus 64 d~ai~~Li~~m~~~Ga~~~~l~aklfGGA~m~~~~~~~IG~rN~~~a~~~L~~~gi~i~a~dvGG~~g-R~i~f~~~tG~ 142 (159)
T 2f9z_C 64 DTAVKTLVEELKKMGAKVERLEAKIAGGASMFESKGMNIGARNVEAVKKHLKDFGIKLLAEDTGGNRA-RSVEYNIETGK 142 (159)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCEEEEEECCCCSCCCSSCHHHHHHHHHHHHHHHTTCCEEEEEECCSSC-EEEEEETTTTE
T ss_pred HHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CEEEEECCCCE
T ss_conf 99999999999985998799899998574226788998369999999999998699389865699987-38999968988
Q ss_pred EEEEE
Q ss_conf 25553
Q gi|254780820|r 218 IHLAE 222 (284)
Q Consensus 218 iiiae 222 (284)
+.+-.
T Consensus 143 v~v~~ 147 (159)
T 2f9z_C 143 LLVRK 147 (159)
T ss_dssp EEEEC
T ss_pred EEEEE
T ss_conf 99998
No 219
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=35.87 E-value=6.2 Score=19.09 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=24.5
Q ss_pred CEECCCCCCEEE--H-HHHHHHCCCCCCCCCCEECCH
Q ss_conf 105667687221--7-889863383889989624379
Q gi|254780820|r 26 WVKCPETGAMVY--H-KDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 26 W~kCp~C~~~i~--~-~~l~~n~~VCp~C~~H~rl~a 59 (284)
=..|.+|+..+- - -+-..+.|+|+-|++...+++
T Consensus 94 p~RC~~C~aylNp~~~~~~~~~~W~C~~C~~~N~lp~ 130 (766)
T 3eh2_A 94 PLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPP 130 (766)
T ss_dssp CCBCTTTCCBCCTTCEEEGGGTEEECTTTCCEEECCT
T ss_pred CCCCCCCCCEECCEEEEECCCCEEECCCCCCCCCCCH
T ss_conf 9827677488987069967999898548998489996
No 220
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Probab=35.61 E-value=12 Score=16.88 Aligned_cols=46 Identities=13% Similarity=0.294 Sum_probs=28.4
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHH---CCCCCCCCCCC
Q ss_conf 0566768722178898633838899896243799999984---55654201334
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFL---FDNAKYCLLDQ 77 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l---~D~gsf~Ei~~ 77 (284)
..|-.||- .+..| -.-||+||..--=+.|.||+.| ..+..|...++
T Consensus 582 krcrdcgy-qfted----rescpkcgsenvdnsrsriealrklahdaefvivgt 630 (1054)
T 1gku_B 582 KRCRDCGY-QFTED----RESCPKCGSENVDNSRSRIEALRKLAHDAEFVIVGT 630 (1054)
T ss_dssp C-----------------------------CCHHHHHHHHHHHHHHHSEEEECC
T ss_pred HHHHHCCC-CCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 57875587-24655----334864466556552889999997504670899807
No 221
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=35.34 E-value=9.9 Score=17.59 Aligned_cols=32 Identities=13% Similarity=0.256 Sum_probs=16.9
Q ss_pred CCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 24774601056676872217889863383889989624379
Q gi|254780820|r 19 RAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 19 k~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
.++++. ..||-|.+.+- +-.+. .|||.|=...
T Consensus 7 ~~i~~~--l~C~IC~~~~~------~pv~~-~CgH~fC~~C 38 (79)
T 2egp_A 7 GNVQEE--VTCPICLELLT------EPLSL-DCGHSLCRAC 38 (79)
T ss_dssp CCCCCC--CEETTTTEECS------SCCCC-SSSCCCCHHH
T ss_pred CCCCCC--CCCCCCCCCCC------CCEEC-CCCCCHHHHH
T ss_conf 567526--89957793116------80776-8988788999
No 222
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=35.04 E-value=3.4 Score=21.04 Aligned_cols=31 Identities=13% Similarity=0.291 Sum_probs=22.4
Q ss_pred CCEECCCCCCEEEHHHHHHHCCCCCCCCCCEE
Q ss_conf 01056676872217889863383889989624
Q gi|254780820|r 25 LWVKCPETGAMVYHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 25 lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~r 56 (284)
+=..||+||.=+|--+-.+ -+.|-+|+|-.-
T Consensus 17 ~~k~CP~CG~GvFmA~H~d-R~~CGKCgyTef 47 (55)
T 2k4x_A 17 KHRFCPRCGPGVFLAEHAD-RYSCGRCGYTEF 47 (55)
T ss_dssp SSCCCTTTTTTCCCEECSS-EEECTTTCCCEE
T ss_pred ECCCCCCCCCCEEEEECCC-CCCCCCCCCEEE
T ss_conf 3375989999477200589-756367554488
No 223
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=34.51 E-value=10 Score=17.48 Aligned_cols=66 Identities=11% Similarity=0.122 Sum_probs=32.9
Q ss_pred EECHHHCCCC-CHHHHHHHHHHHHHHHHH--CCCEEEEECCCCCCCCCCHHHH-HHHHH----HHHHHHHHHHCCC
Q ss_conf 8330318535-778999999999999862--8968999768887765212467-77788----9999999986299
Q gi|254780820|r 127 HEFSFIGGSI-GIAAGEAIVKSCERAIAE--KCPLVMFTASGGARMQEGILSL-MQLPR----TTIAINMLKDAGL 194 (284)
Q Consensus 127 ~df~F~GGSm-G~~~geki~~a~e~A~~~--~~PlI~~~~SGGaRMqEG~~sL-~qMak----t~~a~~~l~~~~l 194 (284)
.++.+-+++. ....-.++...++..+++ +.++.+-|..|=-| -|.+.. .-|.+ ...|++.+++++-
T Consensus 82 ~~i~~~d~~~P~~~~i~~f~~~v~~~~~~~~~~~V~VHC~~G~~R--tg~li~~YL~~~~~~s~~~Ai~~~~~~Rp 155 (169)
T 1yn9_A 82 KKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINR--TGYMVCRYLMHTLGIAPQEAIDRFEKARG 155 (169)
T ss_dssp EECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC--HHHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 998838999898599999999999999859998699988999974--79999999999729999999999998789
No 224
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=34.49 E-value=21 Score=15.12 Aligned_cols=41 Identities=10% Similarity=0.178 Sum_probs=26.6
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9999998628968999768887765212467777889999999986299889985
Q gi|254780820|r 146 KSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVL 200 (284)
Q Consensus 146 ~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl 200 (284)
+..+...++..|+|++|.||. | ...|...|++.|.+-+.++
T Consensus 32 ~~~~~~~d~~~~iv~yC~~G~-r-------------s~~aa~~L~~~G~~~v~~~ 72 (85)
T 2jtq_A 32 RIATAVPDKNDTVKVYCNAGR-Q-------------SGQAKEILSEMGYTHVENA 72 (85)
T ss_dssp HHHHHCCCTTSEEEEEESSSH-H-------------HHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHCCCCCCEEEEECCCCH-H-------------HHHHHHHHHHCCCCEEEEC
T ss_conf 345532578877999889982-7-------------9999999998699979976
No 225
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y*
Probab=34.29 E-value=4.5 Score=20.13 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=23.0
Q ss_pred CCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 6010566768722178898633838899896243
Q gi|254780820|r 24 NLWVKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 24 ~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
.-=.+||.|+..-.++ ..--.|.|.+|++-|-=
T Consensus 58 ~aky~CpfCgk~~vkR-~a~GIW~C~kCg~~~AG 90 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDR-QGTGIWQCSYCDYKFTG 90 (116)
T ss_dssp HSCEECSSSCCEEEEE-EETTEEEETTTCCEEEC
T ss_pred CCCCCCCCCCCCCEEE-EEEEEEECCCCCCEEEC
T ss_conf 0796098889980388-99899874898988857
No 226
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.10A {Pseudomonas aeruginosa PAO1} SCOP: e.59.1.1
Probab=34.16 E-value=2.4 Score=22.15 Aligned_cols=10 Identities=20% Similarity=0.039 Sum_probs=4.0
Q ss_pred CCCCCCCCEE
Q ss_conf 3889989624
Q gi|254780820|r 47 VISSSDFHMK 56 (284)
Q Consensus 47 VCp~C~~H~r 56 (284)
||..|+.+.+
T Consensus 255 ~C~~C~~YlK 264 (309)
T 2fiy_A 255 TCPSCQGYLK 264 (309)
T ss_dssp EETTTTEEEE
T ss_pred ECCCCCCEEE
T ss_conf 7666678466
No 227
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=33.74 E-value=17 Score=15.87 Aligned_cols=41 Identities=24% Similarity=0.432 Sum_probs=21.2
Q ss_pred HHHHCCCEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 98628968999768887-76521246777788999999998629988998567
Q gi|254780820|r 151 AIAEKCPLVMFTASGGA-RMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTN 202 (284)
Q Consensus 151 A~~~~~PlI~~~~SGGa-RMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~ 202 (284)
|....+|+|.+.-.++. -.....+|..||| .|+|.-+|.-+
T Consensus 85 Aa~t~~PVIgVP~~~~~l~G~daLlS~vqMP-----------~GvpVatv~ig 126 (170)
T 1xmp_A 85 AAKTNLPVIGVPVQSKALNGLDSLLSIVQMP-----------GGVPVATVAIG 126 (170)
T ss_dssp HTTCCSCEEEEEECCTTTTTHHHHHHHHCCC-----------TTCCCEECCSS
T ss_pred HHCCCCCEEECCCCCCCCCCHHHHHHHHHCC-----------CCCCEEEEECC
T ss_conf 6514853463544675655077899997189-----------99865888778
No 228
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=33.62 E-value=9.9 Score=17.59 Aligned_cols=32 Identities=9% Similarity=0.057 Sum_probs=20.7
Q ss_pred EECCCCCCEEE------HHHHHHHCCCCCCCCCCEECC
Q ss_conf 05667687221------788986338388998962437
Q gi|254780820|r 27 VKCPETGAMVY------HKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 27 ~kCp~C~~~i~------~~~l~~n~~VCp~C~~H~rl~ 58 (284)
.+||+|+...- ..+.......||.||--+...
T Consensus 79 ~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~cg~~~~~~ 116 (166)
T 3ir9_A 79 TKCSVCGYENKWTRRWKPGEPAPAAGNCPKCGSSLEVT 116 (166)
T ss_dssp EEESSSSCEEEEEECCCC--CCCCCCBCTTTCCBEEEE
T ss_pred EECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 97589874477876135422333345685446302112
No 229
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=33.59 E-value=6.6 Score=18.91 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=22.6
Q ss_pred CCCCCCCEECCCCCCEEEHHHH-----H-------------HHCCCCCCCCCCE
Q ss_conf 4774601056676872217889-----8-------------6338388998962
Q gi|254780820|r 20 AIPENLWVKCPETGAMVYHKDL-----K-------------ENQWVISSSDFHM 55 (284)
Q Consensus 20 ~ip~~lW~kCp~C~~~i~~~~l-----~-------------~n~~VCp~C~~H~ 55 (284)
..-|+|--=|++|+..+|...+ + +....|++||.-+
T Consensus 116 ~~~D~l~WyC~~c~~~l~e~~f~~~di~tql~pv~~~F~~see~RTC~~CG~v~ 169 (174)
T 1yfu_A 116 GMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPPLFESFYASEDKRRCPHCGQVH 169 (174)
T ss_dssp TCCEEEEEECTTTCCEEEEEEECCSCHHHHSHHHHHHHHTCHHHHBCTTTCCBC
T ss_pred CCCCCEEEECCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCHHCCCCCCCCCCC
T ss_conf 873106997278897899999998456887799999986683106188788838
No 230
>3h7h_A Transcription elongation factor SPT4; helices surrounding beta sheet, activator, metal-binding, nucleus, repressor, transcription regulation, zinc; 1.55A {Homo sapiens}
Probab=33.56 E-value=12 Score=16.96 Aligned_cols=49 Identities=6% Similarity=-0.010 Sum_probs=35.5
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEEC-CHHHHHHHHCCCCCCCCCCC
Q ss_conf 10566768722178898633838899896243-79999998455654201334
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMKI-PAKERLKFLFDNAKYCLLDQ 77 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl-~areRi~~l~D~gsf~Ei~~ 77 (284)
-.-|-.|+-+.-..++.++ =||+|.-++.| ..++++.--.- -+|+=+-.
T Consensus 16 lRACl~C~lI~t~~qF~~~--GCpNC~~~l~m~g~~d~v~dcTS-~~F~G~Ia 65 (120)
T 3h7h_A 16 LRACLLCSLVKTIDQFEYD--GCDNCDAYLQMKGNREMVYDCTS-SSFDGIIA 65 (120)
T ss_dssp EEEETTTCBEEEHHHHHHH--CCTTTHHHHCCTTCHHHHHHHEE-SCEEEEEE
T ss_pred CHHHHCCCCEECHHHHHHC--CCCCCHHHHCCCCCHHHHEECCC-CCCCEEEE
T ss_conf 4355208713049999564--99870777427887536104346-66333799
No 231
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.55 E-value=18 Score=15.75 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=22.7
Q ss_pred EECCCCCCEEEHH-HHHH------------HCCCCCCCCCCEECCHHHHH
Q ss_conf 0566768722178-8986------------33838899896243799999
Q gi|254780820|r 27 VKCPETGAMVYHK-DLKE------------NQWVISSSDFHMKIPAKERL 63 (284)
Q Consensus 27 ~kCp~C~~~i~~~-~l~~------------n~~VCp~C~~H~rl~areRi 63 (284)
.+|+.|+.....+ .|.. .-|.|+.|+.-|.-...-+.
T Consensus 16 ~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~~~~~C~~C~k~F~~~~~L~~ 65 (86)
T 1x6h_A 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65 (86)
T ss_dssp EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHH
T ss_pred EECCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHH
T ss_conf 05899988516626588887886377656778716887966267999999
No 232
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=33.32 E-value=4.7 Score=19.96 Aligned_cols=69 Identities=12% Similarity=0.139 Sum_probs=34.3
Q ss_pred CCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECC---CEEECCCHHH
Q ss_conf 887765212467777--889999999986299889985676420111120146852555314---2110232788
Q gi|254780820|r 165 GGARMQEGILSLMQL--PRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPG---AEIGFAGRRV 234 (284)
Q Consensus 165 GGaRMqEG~~sL~qM--akt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~---a~igFaG~rV 234 (284)
.+.+++.|......- .++...++++.+..--+=.++|+-..||..|+.+.+ ++...-|. ..+.|+.|||
T Consensus 91 ~~~~VH~GF~~~~~~~~~~i~~~v~~~~~~~p~~~i~vTGHSLGGAlA~L~a~-~l~~~~~~~~i~~~tFG~Prv 164 (258)
T 3g7n_A 91 SDVKIMRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHV-ALAQNFPDKSLVSNALNAFPI 164 (258)
T ss_dssp TTCCEEHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH-HHHHHCTTSCEEEEEESCCCC
T ss_pred CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH-HHHHHCCCCCEEEEEECCCCC
T ss_conf 87587488999999999999999999998747965998546508899999999-999838998669999589986
No 233
>1yqw_A Periplasmic [NIFE] hydrogenase small subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 3cur_A 3cus_A 3h3x_A 1yrq_A 1frf_S
Probab=33.06 E-value=20 Score=15.33 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=7.5
Q ss_pred CEEEEECCCCCCEEEE
Q ss_conf 8899856764201111
Q gi|254780820|r 195 PYIVVLTNPTTGGVTA 210 (284)
Q Consensus 195 P~I~vl~~pt~GGv~A 210 (284)
-.|++-+=.|+||+.|
T Consensus 107 ~vVA~GtCA~~GGI~a 122 (264)
T 1yqw_A 107 GIICIGTCSAYGGVQK 122 (264)
T ss_dssp CEEEESHHHHHCCGGG
T ss_pred EEEEEECCCCCCCCCC
T ss_conf 7999723111388545
No 234
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, alternative splicing, bromodomain, chromatin regulator, coiled coil, cytoplasm; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 2fui_A 2fuu_A*
Probab=32.90 E-value=10 Score=17.56 Aligned_cols=32 Identities=6% Similarity=0.240 Sum_probs=22.9
Q ss_pred CCCCCCEECCCCCCEEEHHHH-----HH---HCCCCCCCC
Q ss_conf 774601056676872217889-----86---338388998
Q gi|254780820|r 21 IPENLWVKCPETGAMVYHKDL-----KE---NQWVISSSD 52 (284)
Q Consensus 21 ip~~lW~kCp~C~~~i~~~~l-----~~---n~~VCp~C~ 52 (284)
-+++.|+.|..|....+..=+ +. -.|+||.|.
T Consensus 18 d~~~~~i~Cd~C~~~~H~~C~~~~~~~~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 18 DESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 57 (174)
T ss_dssp CTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHH
T ss_pred CCCCCEEECCCCCCEECCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 9996177799998750433689871124666678882036
No 235
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=32.90 E-value=4.9 Score=19.86 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=23.3
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 1056676872217889863383889989624379
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
=.+||.|+..-.++ ..--.|.|.+|++-|-=.|
T Consensus 27 ky~Cp~Cgk~~vkR-~a~GIW~C~kC~~~~AGGA 59 (83)
T 1vq8_Z 27 DHACPNCGEDRVDR-QGTGIWQCSYCDYKFTGGS 59 (83)
T ss_dssp CEECSSSCCEEEEE-EETTEEEETTTCCEEECCS
T ss_pred CCCCCCCCCCEEEE-EEEEEEECCCCCCEEECCC
T ss_conf 97198999976789-9988978378999885686
No 236
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans R1} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=32.64 E-value=8.5 Score=18.10 Aligned_cols=20 Identities=5% Similarity=0.121 Sum_probs=14.2
Q ss_pred ECHHHHHHHHHHHHHHHHCC
Q ss_conf 35899999999999997237
Q gi|254780820|r 263 VHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 263 v~r~~l~~~i~~ll~il~~~ 282 (284)
-.++++...+-..++.|+..
T Consensus 209 ~~~~~l~~~l~~yl~~Hlg~ 228 (244)
T 1u5k_A 209 ADRPALWRALEKFVTVQVGG 228 (244)
T ss_dssp GGHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999688
No 237
>1kid_A Groel (HSP60 class); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Escherichia coli} SCOP: c.8.5.1 PDB: 1fya_A 1fy9_A 1la1_A 1jon_A 1dk7_A 1dkd_A
Probab=32.35 E-value=23 Score=14.88 Aligned_cols=53 Identities=17% Similarity=0.296 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 999999999998628968999768887765212467777889999999986299889985676420
Q gi|254780820|r 141 GEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTG 206 (284)
Q Consensus 141 geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~G 206 (284)
-+.|..+.|.+.+++.||++++..=. +-+++ +..++++ .|..-+++..-|-+|
T Consensus 57 ~~~ilp~Le~~~~~~rPLlIIA~di~----~eaL~-------~Lv~N~~--kg~l~v~aVkaPgfG 109 (203)
T 1kid_A 57 IREMLPVLEAVAKAGKPLLIIAEDVE----GEALA-------TLVVNTM--RGIVKVAAVKAPGFG 109 (203)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESEEC----HHHHH-------HHHHHHH--TTSCCEEEEECCSCH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC----HHHHH-------HHHHHHC--CCCCCEEEECCCCCC
T ss_conf 87889999999854996899954106----88999-------9998640--587532464388877
No 238
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=32.35 E-value=7.7 Score=18.40 Aligned_cols=26 Identities=15% Similarity=0.351 Sum_probs=16.9
Q ss_pred EECCCCCCEEEHHHHHHHCC-------------CCCCCC
Q ss_conf 05667687221788986338-------------388998
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQW-------------VISSSD 52 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~-------------VCp~C~ 52 (284)
.||++||..+...+-.+.-| +|--|-
T Consensus 5 ~kC~GCGa~lQ~~d~~~pGY~p~~~~~~~~~~~~C~RC~ 43 (369)
T 3ec1_A 5 LRCIGCGAAIQFENPKNAGYAPKSVLEKDAEEVICQRCF 43 (369)
T ss_dssp ---------------------------------------
T ss_pred CEECCCCCEEECCCCCCCCCCCHHHHCCCCCCEEEHHHH
T ss_conf 885899833088899989887668944688737856464
No 239
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=32.33 E-value=5.2 Score=19.65 Aligned_cols=36 Identities=8% Similarity=0.044 Sum_probs=23.3
Q ss_pred CCCCCCEECCCCCCEEEHHHH------------------HHHCCCCCCCCCCEE
Q ss_conf 774601056676872217889------------------863383889989624
Q gi|254780820|r 21 IPENLWVKCPETGAMVYHKDL------------------KENQWVISSSDFHMK 56 (284)
Q Consensus 21 ip~~lW~kCp~C~~~i~~~~l------------------~~n~~VCp~C~~H~r 56 (284)
.-|++--=|++|+..+|..++ .+....|++||+-+.
T Consensus 119 ~~D~l~WyC~~C~~~l~e~~F~~~dI~tql~pv~~~F~~see~RTC~~CGtv~~ 172 (176)
T 1zvf_A 119 ENDKIRWYCSHCRQVVHESELQMLDLGTQVKEAILDFENDVEKRTCFHCKTLNY 172 (176)
T ss_dssp SCCEEEEECTTTCCEEEEEECCSSSTTHHHHHHHHHHHTCHHHHBCTTTCCBCC
T ss_pred CCCCEEEECCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
T ss_conf 842358960798977999999985558877999999864742061866678688
No 240
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=32.32 E-value=23 Score=14.87 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHCCC--EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9999999999862896--8999768887765212467777889999999986299889985676
Q gi|254780820|r 142 EAIVKSCERAIAEKCP--LVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNP 203 (284)
Q Consensus 142 eki~~a~e~A~~~~~P--lI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~p 203 (284)
+-+.+.++.+.+.++. =+++.=+|| ...-+++-.++. + ..|+|||.|-|.+
T Consensus 78 ~~~~~i~~~l~~~~~~r~~~iiaiGGG--------~v~D~agf~As~--~-~RGi~~i~iPTtl 130 (368)
T 2gru_A 78 STVTNLQERAIALGANRRTAIVAVGGG--------LTGNVAGVAAGM--M-FRGIALIHVPTTF 130 (368)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESH--------HHHHHHHHHHHH--B-TTCCEEEEEECSH
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCC--------HHHHHHHHHHHH--H-HCCCCEEECCCCH
T ss_conf 999999999986599977538996593--------155489999999--6-1898379578714
No 241
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=31.64 E-value=20 Score=15.28 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=16.0
Q ss_pred EECCCCCCE---EEHHHH---HHHCCCCCCCCCCEECCHHHHHHHHC
Q ss_conf 056676872---217889---86338388998962437999999845
Q gi|254780820|r 27 VKCPETGAM---VYHKDL---KENQWVISSSDFHMKIPAKERLKFLF 67 (284)
Q Consensus 27 ~kCp~C~~~---i~~~~l---~~n~~VCp~C~~H~rl~areRi~~l~ 67 (284)
++|-.||.. -|...| +....-||+-.- .+++.++-+.
T Consensus 15 tNC~eCG~ptCmAFA~kl~~g~~~~~~CP~~~~----eake~L~~a~ 57 (445)
T 2h9a_A 15 KNCKECGQPTCLAFAMQIAAGKAGLDACPYVSD----EAKELLESAS 57 (445)
T ss_dssp -----------------------------------------------
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH----HHHHHHHHCC
T ss_conf 241103883189999999708876677999889----9999998547
No 242
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=31.43 E-value=24 Score=14.77 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=18.8
Q ss_pred CCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 224774601056676872217889863383889989624379
Q gi|254780820|r 18 RRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 18 kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
+.++|+. ..||=|.+++..+ |...|||.|--.+
T Consensus 100 ~~eiP~~--~~C~i~~~~m~dP-------v~~~~ghty~~~~ 132 (179)
T 2f42_A 100 KREIPDY--LCGKISFELMREP-------CITPSGITYDRKD 132 (179)
T ss_dssp CCCCCGG--GBCTTTCSBCSSE-------EECTTSCEEEHHH
T ss_pred CCCCCHH--HCCCCCCCCCCCC-------EECCCCCEECHHH
T ss_conf 5699534--1774658647684-------1469979766999
No 243
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=30.54 E-value=25 Score=14.67 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=12.7
Q ss_pred HHHCCCC-CCEEEEEEEEECEEEE
Q ss_conf 6421667-7169998787041499
Q gi|254780820|r 101 RSKTGLI-DSIVSAVGNVRDFKLV 123 (284)
Q Consensus 101 ~~kTg~~-davv~G~G~I~G~~vv 123 (284)
..+.|.+ +-|+--+|.+.-..|.
T Consensus 117 h~kAG~~~~~vielHGsl~~~~C~ 140 (289)
T 1q1a_A 117 ERQAGVKDDLIIEAHGSFAHCHCI 140 (289)
T ss_dssp HHHTTCCGGGEEETTEEEEEEEET
T ss_pred HHHCCCCCCCCEEEECCCCCCEEC
T ss_conf 876799723320143141321658
No 244
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.08 E-value=24 Score=14.77 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=22.2
Q ss_pred EECCCCCCEEEHHHH---------HHHCCCCCCCCCCEECCHHHH
Q ss_conf 056676872217889---------863383889989624379999
Q gi|254780820|r 27 VKCPETGAMVYHKDL---------KENQWVISSSDFHMKIPAKER 62 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l---------~~n~~VCp~C~~H~rl~areR 62 (284)
.+|+.|+.....+.- .+..|.|+.|++-|.....-+
T Consensus 15 y~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~ 59 (72)
T 1x6e_A 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59 (72)
T ss_dssp EECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHH
T ss_conf 179999887398999999998736884638898989608889999
No 245
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 3m99_D
Probab=29.94 E-value=8.6 Score=18.04 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=9.7
Q ss_pred HCCCCCCCCCCEECCH
Q ss_conf 3383889989624379
Q gi|254780820|r 44 NQWVISSSDFHMKIPA 59 (284)
Q Consensus 44 n~~VCp~C~~H~rl~a 59 (284)
+|+||..||...-++|
T Consensus 74 ~YRvC~~CGkPi~lsA 89 (96)
T 3mhs_E 74 QYRVCEKCGKPLALTA 89 (96)
T ss_dssp CCEEETTTCCEECGGG
T ss_pred CEEHHCCCCCCCHHHH
T ss_conf 4200024687011999
No 246
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=29.85 E-value=0.93 Score=25.21 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=50.2
Q ss_pred HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEC--CCC---CEEEEECC----
Q ss_conf 289689997688877652124677778899999999862998899856764201111201--468---52555314----
Q gi|254780820|r 154 EKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYA--MLG---DIHLAEPG---- 224 (284)
Q Consensus 154 ~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a--~lg---Diiiaep~---- 224 (284)
..-|+|+++.=||.-|. +- ++......++|.+.|+.|.-.+|.....- ... +-.+..|.
T Consensus 471 ~~r~vv~i~GDGsf~m~--~~----------eL~Ta~r~~lpi~ivV~NN~gygi~~~l~~~~~~~~~~~~~~~~~~~df 538 (604)
T 2x7j_A 471 TKAPVTLVIGDLSFYHD--LN----------GLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHFEDLFGTPTGLDF 538 (604)
T ss_dssp HTSCEEEEEEHHHHHHT--GG----------GGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHHHHHTTCCCCCCT
T ss_pred CCCCEEEEECCHHHHCC--HH----------HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEECCCCCCCH
T ss_conf 79974999885476337--89----------9999998395938999979986587445654235751231078999999
Q ss_pred ----CEEECCCHHHHHHHHCCCCCCCCHHHHHHHHC---CCCCEEECHHHHHHHHHHHHHHHHCC
Q ss_conf ----21102327887876367788720215999968---98353735899999999999997237
Q gi|254780820|r 225 ----AEIGFAGRRVIEQTVREKLPDGFQRSEYLVEH---GMIDRIVHRHDIPEVVSSLCKILTKS 282 (284)
Q Consensus 225 ----a~igFaG~rVi~~t~~~~lp~~fqtae~l~~~---G~iD~iv~r~~l~~~i~~ll~il~~~ 282 (284)
.-.|+.|-|| +.-++|.+-+..+ +++ =+||.+++|++.....-.+++-..|+
T Consensus 539 ~~lA~a~G~~~~~v---~~~~eL~~al~~a---~~~~gp~lIeV~~d~~~~~~~~~~~~~~~~~~ 597 (604)
T 2x7j_A 539 KHAAALYGGTYSCP---ASWDEFKTAYAPQ---ADKPGLHLIEIKTDRQSRVQLHRDMLNEAVRE 597 (604)
T ss_dssp HHHHHHTTCEEECC---SSHHHHHHHCCCC---CSSCCEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEE---CCHHHHHHHHHHH---HHCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_conf 99999789979996---9999999999999---81899199999978788499999999999999
No 247
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=29.65 E-value=22 Score=14.98 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=35.8
Q ss_pred EECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 83303185357789999999999998628968999768887765212467777889999999986299889985676420
Q gi|254780820|r 127 HEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTG 206 (284)
Q Consensus 127 ~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~G 206 (284)
.-+.-||++++.+.|-++ ...+.|+|+++.-||.-|.-. +|......++|.+.|+.|.-.+
T Consensus 423 ~g~g~mG~~l~aAiGaa~-------a~p~~~Vv~i~GDgsf~~~~~------------eL~ta~~~~lpi~iVV~NN~g~ 483 (590)
T 1ybh_A 423 GGLGAMGFGLPAAIGASV-------ANPDAIVVDIDGDGSFIMNVQ------------ELATIRVENLPVKVLLLNNQHL 483 (590)
T ss_dssp CSSCCTTCHHHHHHHHHH-------HCTTSCEEEEEEHHHHHHTTT------------HHHHHHHTTCCEEEEEEECSBC
T ss_pred CHHHHHHHHHHHHHHHHH-------HCCCCEEEEEECCCHHHCCHH------------HHHHHHHHCCCEEEEEEECCCC
T ss_conf 705668999999999998-------689985999947804305689------------9999999687929999969987
Q ss_pred E
Q ss_conf 1
Q gi|254780820|r 207 G 207 (284)
Q Consensus 207 G 207 (284)
|
T Consensus 484 g 484 (590)
T 1ybh_A 484 G 484 (590)
T ss_dssp H
T ss_pred C
T ss_conf 2
No 248
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondrial; NAD dependent deacetylase, sirtuin, substrate peptide complex, hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A
Probab=29.39 E-value=23 Score=14.93 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=13.4
Q ss_pred HHHHCCC-CCCEEEEEEEEECEEEE
Q ss_conf 6642166-77169998787041499
Q gi|254780820|r 100 NRSKTGL-IDSIVSAVGNVRDFKLV 123 (284)
Q Consensus 100 a~~kTg~-~davv~G~G~I~G~~vv 123 (284)
-..+.|. .+-|+-.+|.+.-..|.
T Consensus 119 Lh~~AG~~~~~vielHG~~~~~~C~ 143 (285)
T 3glr_A 119 LERVSGIPASKLVEAHGTFASATCT 143 (285)
T ss_dssp HHHHTTCCGGGEEETTEEEEEEEET
T ss_pred HHHHCCCCHHHEEEECCCEEEEEEC
T ss_conf 5766599634414421650056858
No 249
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.39 E-value=17 Score=15.80 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=23.9
Q ss_pred EECCCCCCEEEHHH-HH--------HHCCCCCCCCCCEECCHHHHH
Q ss_conf 05667687221788-98--------633838899896243799999
Q gi|254780820|r 27 VKCPETGAMVYHKD-LK--------ENQWVISSSDFHMKIPAKERL 63 (284)
Q Consensus 27 ~kCp~C~~~i~~~~-l~--------~n~~VCp~C~~H~rl~areRi 63 (284)
.+|+.|+.....+. |. +.-|.|+.|++-|.-...-+.
T Consensus 10 y~C~~C~~~f~~~~~L~~H~~~H~~~kpy~C~~C~~~f~~~~~L~~ 55 (70)
T 1x5w_A 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSK 55 (70)
T ss_dssp EECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHH
T ss_pred EECCCCCCEECCHHHHHHHHHHHCCCCCEECCCCCCEECCHHHHHH
T ss_conf 0189998861989999999998579978278977887488889999
No 250
>2i13_A AART; DNA binding, zinc finger, DNA binding protein/DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=29.21 E-value=21 Score=15.16 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=17.3
Q ss_pred EECCCCCCEE-EHHHHHH--------HCCCCCCCCCCEECCHH
Q ss_conf 0566768722-1788986--------33838899896243799
Q gi|254780820|r 27 VKCPETGAMV-YHKDLKE--------NQWVISSSDFHMKIPAK 60 (284)
Q Consensus 27 ~kCp~C~~~i-~~~~l~~--------n~~VCp~C~~H~rl~ar 60 (284)
.+|+.|+... ....|.. ..+.|..|++-|.-...
T Consensus 22 f~C~~C~~~f~~~~~L~~H~~~h~~~~~~~c~~C~~~f~~~~~ 64 (190)
T 2i13_A 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD 64 (190)
T ss_dssp ---------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCHHH
T ss_conf 3699998885989999999887479987127887865377677
No 251
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=29.18 E-value=7.7 Score=18.40 Aligned_cols=29 Identities=17% Similarity=0.077 Sum_probs=11.5
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCE
Q ss_conf 05667687221788986338388998962
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHM 55 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~ 55 (284)
+|||.|+...--=.-...--.|..|+.-+
T Consensus 8 VkCp~C~n~qiVFShA~t~V~C~~Cgt~L 36 (66)
T 1qxf_A 8 VKCPDCEHEQVIFDHPSTIVKCIICGRTV 36 (66)
T ss_dssp EECTTTCCEEEEESSCSSCEECSSSCCEE
T ss_pred EECCCCCCEEEEEECCCCEEECCCCCCEE
T ss_conf 49999997157981698168851228777
No 252
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=28.84 E-value=26 Score=14.47 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=20.9
Q ss_pred CCCCCCEECC-CCCCEEE-------HHHHHHHCCCCCCCC
Q ss_conf 7746010566-7687221-------788986338388998
Q gi|254780820|r 21 IPENLWVKCP-ETGAMVY-------HKDLKENQWVISSSD 52 (284)
Q Consensus 21 ip~~lW~kCp-~C~~~i~-------~~~l~~n~~VCp~C~ 52 (284)
-++..|+.|. .|..=.+ ..+.....|+||.|.
T Consensus 13 ~~~~~mI~Cd~~C~~W~H~~Cvg~~~~~~~~~~~~C~~Cs 52 (52)
T 2kgg_A 13 KDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCCEEECCCCCCCEECCCCCCCCHHCCCCCCEECCCCC
T ss_conf 9998996769988781984189958101899738898897
No 253
>2ory_A Lipase; alpha/beta hydrolase; 2.20A {Photobacterium SP}
Probab=28.71 E-value=5 Score=19.81 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=7.5
Q ss_pred EEECCCCCCEEEEEEC
Q ss_conf 9856764201111201
Q gi|254780820|r 198 VVLTNPTTGGVTASYA 213 (284)
Q Consensus 198 ~vl~~pt~GGv~AS~a 213 (284)
.++|+-..||..|+.+
T Consensus 168 I~vTGHSLGGALAtL~ 183 (346)
T 2ory_A 168 ICVTGHSKGGALSSTL 183 (346)
T ss_dssp EEEEEETHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHH
T ss_conf 9998156688999999
No 254
>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*
Probab=28.57 E-value=27 Score=14.44 Aligned_cols=25 Identities=28% Similarity=0.198 Sum_probs=10.7
Q ss_pred HHHHHHCCCCEEEEECCCCCCEEEE
Q ss_conf 9999862998899856764201111
Q gi|254780820|r 186 INMLKDAGLPYIVVLTNPTTGGVTA 210 (284)
Q Consensus 186 ~~~l~~~~lP~I~vl~~pt~GGv~A 210 (284)
+.+++++---.|++-+=.|+||+.|
T Consensus 98 ~~~~~~~ak~vVA~GtCA~~GGI~a 122 (267)
T 1wui_S 98 CSRILPKAQAVIAYGTCATFGGVQA 122 (267)
T ss_dssp HHHHGGGSSEEEEESHHHHHCCGGG
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf 9998325988999402002488645
No 255
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=28.54 E-value=13 Score=16.80 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=9.1
Q ss_pred HHCCCCEEEEECCCCC
Q ss_conf 8629988998567642
Q gi|254780820|r 190 KDAGLPYIVVLTNPTT 205 (284)
Q Consensus 190 ~~~~lP~I~vl~~pt~ 205 (284)
++.|.|.|.|--+||-
T Consensus 201 ~~~ga~~i~IN~~~t~ 216 (249)
T 1m2k_A 201 KQRGGAIIEINPDETP 216 (249)
T ss_dssp HHTTCEEEEECSSCCT
T ss_pred HHCCCEEEEECCCCCC
T ss_conf 9759859998799989
No 256
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=28.28 E-value=8.3 Score=18.16 Aligned_cols=131 Identities=12% Similarity=0.034 Sum_probs=56.8
Q ss_pred EEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 1499999833031853577899999999999986289689997688-----87765212467777889999999986299
Q gi|254780820|r 120 FKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASG-----GARMQEGILSLMQLPRTTIAINMLKDAGL 194 (284)
Q Consensus 120 ~~vvv~~~df~F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SG-----GaRMqEG~~sL~qMakt~~a~~~l~~~~l 194 (284)
+..||.+. .|.+|..+. .+....+.+.+.+..++.+.-.| |........ ..+.....++..+.+. -
T Consensus 4 ~~~Vv~~H--G~~~~~~~~----~~~~la~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~--~~v~~~~~~~~~~~~~-~ 74 (176)
T 2qjw_A 4 RGHCILAH--GFESGPDAL----KVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVR--GRLQRLLEIARAATEK-G 74 (176)
T ss_dssp SCEEEEEC--CTTCCTTSH----HHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHH--HHHHHHHHHHHHHHTT-S
T ss_pred CCEEEEEC--CCCCCCCCH----HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHCCCC-C
T ss_conf 88899989--988897747----9999999999789989993578889999988779999--9999999999964889-9
Q ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEECCC-EEECCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEECHHHHHH
Q ss_conf 8899856764201111201468525553142-110232788787636778872021599996898353735899999
Q gi|254780820|r 195 PYIVVLTNPTTGGVTASYAMLGDIHLAEPGA-EIGFAGRRVIEQTVREKLPDGFQRSEYLVEHGMIDRIVHRHDIPE 270 (284)
Q Consensus 195 P~I~vl~~pt~GGv~AS~a~lgDiiiaep~a-~igFaG~rVi~~t~~~~lp~~fqtae~l~~~G~iD~iv~r~~l~~ 270 (284)
| |. +.+-++||..|.....-. .+.+. .+..++. .....+...++...++=||--|.+++..+.+.
T Consensus 75 ~-i~-l~G~S~Gg~~a~~~a~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~p~l~v~G~~D~~v~~~~~~~ 140 (176)
T 2qjw_A 75 P-VV-LAGSSLGSYIAAQVSLQV---PTRALFLMVPPTK------MGPLPALDAAAVPISIVHAWHDELIPAADVIA 140 (176)
T ss_dssp C-EE-EEEETHHHHHHHHHHTTS---CCSEEEEESCCSC------BTTBCCCCCCSSCEEEEEETTCSSSCHHHHHH
T ss_pred C-EE-EEEECCHHHHHHHHHHHC---CCCEEEEECCCCC------CCCHHHHCCCCCCEEEECCCCCCCCCHHHHHH
T ss_conf 8-89-999682899999999736---7884999817656------76133201346746755378887649999999
No 257
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolase, structural genomics; HET: MSE; 2.10A {Clostridium difficile 630}
Probab=28.11 E-value=15 Score=16.20 Aligned_cols=11 Identities=18% Similarity=0.135 Sum_probs=4.8
Q ss_pred HHHHHHHCCCC
Q ss_conf 15999968983
Q gi|254780820|r 249 RSEYLVEHGMI 259 (284)
Q Consensus 249 tae~l~~~G~i 259 (284)
-++++-+.|+|
T Consensus 264 v~~~l~~~~li 274 (274)
T 3fzq_A 264 IYKELKRRNII 274 (274)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHCCC
T ss_conf 99999986889
No 258
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate synthase, structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=28.00 E-value=25 Score=14.62 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=27.7
Q ss_pred CCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCC---CHHCCCCCC---CCHHHHHHHHHHHCCC
Q ss_conf 899896243799999984556542013345687---020186764---2035667766642166
Q gi|254780820|r 49 SSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVC---QDPLKFRDN---KKYIDRLKENRSKTGL 106 (284)
Q Consensus 49 p~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~---~DPL~F~d~---k~Y~drl~~a~~kTg~ 106 (284)
+.+.|.+.+|.+ +.|.+|...++...+.. ...|=..|. +.|.+++.+.-++.|.
T Consensus 3 ~~~~h~i~~P~~----i~~G~g~l~~l~~~l~~~g~~k~liVtd~~~~~~~~~~v~~~L~~~~i 62 (354)
T 3ce9_A 3 KGISHRIAIPLI----LEVGNNKIYNIGQIIKKGNFKRVSLYFGEGIYELFGETIEKSIKSSNI 62 (354)
T ss_dssp ---CCCCCCCSE----EEEESSCGGGHHHHHGGGTCSEEEEEEETTHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCE----EEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 876288537976----898959899999999971989599998967889999999999987799
No 259
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=27.73 E-value=15 Score=16.31 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=24.4
Q ss_pred CEECCCCCCEEE--HH-HHHHHCCCCCCCCCCEECCH
Q ss_conf 105667687221--78-89863383889989624379
Q gi|254780820|r 26 WVKCPETGAMVY--HK-DLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 26 W~kCp~C~~~i~--~~-~l~~n~~VCp~C~~H~rl~a 59 (284)
=..|.+|+..+- -+ +-..+.|+|+-|++...++.
T Consensus 98 p~RC~~C~AylNpf~~~~~~~~~W~C~~C~~~N~~p~ 134 (770)
T 3efo_B 98 PVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPP 134 (770)
T ss_dssp SCBCTTTCCBSCTTCEEEGGGTEEECTTTCCEEECCG
T ss_pred CCCCCCCCCEECCCEEEECCCCEEECCCCCCCCCCCH
T ss_conf 9867687488887459967999998657998489986
No 260
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=27.67 E-value=27 Score=14.33 Aligned_cols=89 Identities=15% Similarity=0.134 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCCCH-------HHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 03566776664216677169998787041499999833031853577-------89999999999998628968999768
Q gi|254780820|r 92 KYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSIGI-------AAGEAIVKSCERAIAEKCPLVMFTAS 164 (284)
Q Consensus 92 ~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSmG~-------~~geki~~a~e~A~~~~~PlI~~~~S 164 (284)
.-.++++++.+.||+.-.. ++..+- +|.+|+-|++.+ ..-+.+.++++.|.+-+.+.++++.+
T Consensus 69 ~~~~~ik~~l~~~Gl~~~~--~T~nlf--------~~p~~~~Ga~TspD~~vR~~Ai~~vk~aidiAa~LGa~~vvlw~G 138 (386)
T 1muw_A 69 SHIKRFRQALDATGMTVPM--ATTNLF--------THPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGG 138 (386)
T ss_dssp HHHHHHHHHHHHHTCBCCE--EECCCS--------SSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred HHHHHHHHHHHHCCCCCCE--ECCCCC--------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 9999999999963984213--035324--------685535787789599999999999999999999949984897389
Q ss_pred -CCCCCCCCH---HHHHHHHHHHHHHHHHH
Q ss_conf -887765212---46777788999999998
Q gi|254780820|r 165 -GGARMQEGI---LSLMQLPRTTIAINMLK 190 (284)
Q Consensus 165 -GGaRMqEG~---~sL~qMakt~~a~~~l~ 190 (284)
-|..-.... ..+-+++.....+..+.
T Consensus 139 ~eG~~~~~~~d~~~~~~~l~e~L~~v~dya 168 (386)
T 1muw_A 139 REGAESGAAKDVRVALDRMKEAFDLLGEYV 168 (386)
T ss_dssp TCEESSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 777677665799999999999999999999
No 261
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=27.57 E-value=12 Score=17.08 Aligned_cols=14 Identities=7% Similarity=0.164 Sum_probs=8.0
Q ss_pred HCCCCCCCCCCEEC
Q ss_conf 33838899896243
Q gi|254780820|r 44 NQWVISSSDFHMKI 57 (284)
Q Consensus 44 n~~VCp~C~~H~rl 57 (284)
+--||+.|+.-|+|
T Consensus 52 ~~Lic~~~~~~YPI 65 (97)
T 2k5r_A 52 EALITRDRKQVFRI 65 (97)
T ss_dssp EEEECTTSCEEEEE
T ss_pred CEEECCCCCEEEEC
T ss_conf 83874655877062
No 262
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=27.43 E-value=28 Score=14.30 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 899999999999986289689997688877652124677778899999999862998899856764
Q gi|254780820|r 139 AAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPT 204 (284)
Q Consensus 139 ~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt 204 (284)
..-|-+.++++.|.++++.+|+ .-+|| |.+-++|..+.. .++|.|+|-|-+.
T Consensus 72 p~~~~v~~~~~~~~~~~~D~Ii-avGGG--------sviD~aK~ia~~-----~~~P~i~iPTtas 123 (364)
T 3iv7_A 72 VPIEVAERARAVATDNEIDLLV-CVGGG--------STIGLAKAIAMT-----TALPIVAIPTTYA 123 (364)
T ss_dssp CBHHHHHHHHHHHHHTTCCEEE-EEESH--------HHHHHHHHHHHH-----HCCCEEEEECSSS
T ss_pred CCHHHHHHHHHHHHHCCCCEEE-EECCC--------HHHHHHHHHEEC-----CCCCEEEECCCCC
T ss_conf 6999999999999865999899-94581--------675421421111-----6798788537666
No 263
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=27.39 E-value=28 Score=14.29 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=23.5
Q ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCE
Q ss_conf 6289689997688877652124677778899999999862998899856764201
Q gi|254780820|r 153 AEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGG 207 (284)
Q Consensus 153 ~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GG 207 (284)
+.+.++-.+..-|. +|+|-+||+.-|+ +++..-.+|+..||+-=|
T Consensus 20 ~~g~~igfVPTMGa--LH~GHlsLI~~A~--------~~~~~vvVSIFVNP~QF~ 64 (283)
T 3ag6_A 20 RSGTTIGFIPTMGA--LHDGHLTMVRESV--------STNDITIVSVFVNPLQFG 64 (283)
T ss_dssp HTTCCEEEEEECSS--CCHHHHHHHHHHH--------TTSSEEEEEECCCGGGCC
T ss_pred HCCCEEEEECCCCC--HHHHHHHHHHHHH--------HHCCCEEEEEEECHHHCC
T ss_conf 72991999858853--7499999999998--------738978999987702248
No 264
>3lpe_B DNA-directed RNA polymerase subunit E''; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii}
Probab=27.28 E-value=19 Score=15.57 Aligned_cols=19 Identities=5% Similarity=0.052 Sum_probs=13.8
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCC
Q ss_conf 05667687221788986338388998
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSD 52 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~ 52 (284)
.-|-+|+-+... .+||+|+
T Consensus 2 kAC~~C~~i~~~-------~~Cp~C~ 20 (59)
T 3lpe_B 2 RACLKCKYLTND-------EICPICH 20 (59)
T ss_dssp EEETTTCBEESS-------SBCTTTC
T ss_pred CCCCCCCCCCCC-------CCCCCCC
T ss_conf 372319577178-------9896948
No 265
>3guz_A Pantothenate synthetase; pantothenate biosynthesis, substrate binding, competitive inhibition, rossmann fold; HET: PAF; 1.67A {Escherichia coli}
Probab=27.03 E-value=28 Score=14.25 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=43.1
Q ss_pred HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC-----CCEEEE-ECC
Q ss_conf 98628968999768887765212467777889999999986299889985676420111120146-----852555-314
Q gi|254780820|r 151 AIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAML-----GDIHLA-EPG 224 (284)
Q Consensus 151 A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~l-----gDiiia-ep~ 224 (284)
..+++-.+-.+...|. +|||-+||+.-|+ +++..-.+|+..||+-=+....|..- .|+-+. +-+
T Consensus 17 ~r~~g~~IgfVPTMGa--LH~GHlsLI~~A~--------~~~d~vvVSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~g 86 (176)
T 3guz_A 17 LRMEGKRVALVPTMGN--LHDGHMKLVDEAK--------ARADVVAVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRK 86 (176)
T ss_dssp HHHTTCCEEEEEECSC--CCGGGHHHHHHHH--------HTCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHTT
T ss_pred HHHCCCEEEEECCCCC--HHHHHHHHHHHHH--------HHCCEEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 9974994999838730--6599999999999--------75993899960370324666666549998077899999769
Q ss_pred CEEECCCH
Q ss_conf 21102327
Q gi|254780820|r 225 AEIGFAGR 232 (284)
Q Consensus 225 a~igFaG~ 232 (284)
..+-|+.+
T Consensus 87 vd~vf~P~ 94 (176)
T 3guz_A 87 VDLVFAPS 94 (176)
T ss_dssp CCEEECCC
T ss_pred CCEEEECC
T ss_conf 98999688
No 266
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=26.83 E-value=9.2 Score=17.85 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=22.2
Q ss_pred CCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEE
Q ss_conf 601056676872217889863383889989624
Q gi|254780820|r 24 NLWVKCPETGAMVYHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 24 ~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~r 56 (284)
.-=.+||-|+..--++ ..--.|-|.+|++-|-
T Consensus 24 ~~ky~CpfCgk~~vkR-~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 24 HARYDCSFCGKKTVKR-GAAGIWTCSCCKKTVA 55 (72)
T ss_dssp HSCBCCSSCCSSCBSB-CSSSCBCCSSSCCCCC
T ss_pred CCCCCCCCCCCCEEEE-EEEEEEECCCCCCEEE
T ss_conf 5784099999977788-9888987389898885
No 267
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=26.61 E-value=27 Score=14.42 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=26.1
Q ss_pred CCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHH
Q ss_conf 2224774601056676872217889863383889989624379999
Q gi|254780820|r 17 GRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKER 62 (284)
Q Consensus 17 ~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areR 62 (284)
...++|+. ..||-|.+.+- +-.+++.|+|.|-...-++
T Consensus 8 ~~~~~~~~--~~C~IC~~~~~------~p~~~~~CgH~fc~~Ci~~ 45 (74)
T 2yur_A 8 EDDPIPDE--LLCLICKDIMT------DAVVIPCCGNSYCDECIRT 45 (74)
T ss_dssp CCCCSCGG--GSCSSSCCCCT------TCEECSSSCCEECTTHHHH
T ss_pred CCCCCCCC--CCCCCCCHHHH------CCEEECCCCCEECHHHHHH
T ss_conf 77889988--99966491750------9718488989999999999
No 268
>2zkr_2 60S ribosomal protein L37E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} SCOP: i.1.1.1
Probab=26.48 E-value=27 Score=14.42 Aligned_cols=78 Identities=23% Similarity=0.454 Sum_probs=44.2
Q ss_pred CCCCCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCH
Q ss_conf 45422247746010566768722178898633838899896243799999984556542013345687020186764203
Q gi|254780820|r 14 SVFGRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKY 93 (284)
Q Consensus 14 ~~~~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~D~gsf~Ei~~~~~~~DPL~F~d~k~Y 93 (284)
+.+.|+.-.- -+.|-.||..-|+.. -.+|..|||. +++.| +| ||...
T Consensus 6 ~SfGKr~~Kt--H~lCrRCG~~syH~q----K~~CasCGyp---a~k~R--------~Y-------------nWs~K--- 52 (97)
T 2zkr_2 6 SSFGKRRNKT--HTLCRRCGSKAYHLQ----KSTCGKCGYP---AKRKR--------KY-------------NWSAK--- 52 (97)
T ss_dssp SSCSCSCCCC--EECCTTTCSSCEETT----SCCBTTTCTT---TSSCC--------CC-------------SSSSC---
T ss_pred CCCCCCCCCC--CCHHCCCCCHHHHCC----CCCCCCCCCC---HHHHC--------CC-------------CHHHH---
T ss_conf 6767767876--451027696244303----0301003897---66614--------65-------------50333---
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCCC
Q ss_conf 5667766642166771699987870414999998330318535
Q gi|254780820|r 94 IDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGSI 136 (284)
Q Consensus 94 ~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGSm 136 (284)
.-+. -.+|.|..--...|.--+.-.|.-|+.
T Consensus 53 -----akrr-------~ttGtGrmr~lk~v~rrfkngfregt~ 83 (97)
T 2zkr_2 53 -----AKRR-------NTTGTGRMRHLKIVYRRFRHGFREGTT 83 (97)
T ss_dssp -----C-------------------------------------
T ss_pred -----HCCC-------CCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf -----2036-------777743117899999998657666877
No 269
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=26.44 E-value=17 Score=15.86 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=20.1
Q ss_pred CCEECCCCCC----EEEHHHHHHHCCCCCCCCCCEECC
Q ss_conf 0105667687----221788986338388998962437
Q gi|254780820|r 25 LWVKCPETGA----MVYHKDLKENQWVISSSDFHMKIP 58 (284)
Q Consensus 25 lW~kCp~C~~----~i~~~~l~~n~~VCp~C~~H~rl~ 58 (284)
--+-|..|.+ +++-.--+....-||.||+.|+|.
T Consensus 32 RiVGC~g~~~dsh~v~W~~l~~g~~~RC~eCG~~fkL~ 69 (80)
T 2odx_A 32 RYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLN 69 (80)
T ss_dssp CCEEESSSTTCCSCCEEECCCTTCEEECSSSCCEEEEC
T ss_pred EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 79877578888746689996079842356688699998
No 270
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=26.30 E-value=20 Score=15.29 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 542224774601056676872217889863383889989
Q gi|254780820|r 15 VFGRRAIPENLWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 15 ~~~kk~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
.+.|+.-.. -+-|..||..-|+.. -.+|..|||
T Consensus 8 SfGKr~~kt--H~~CrRCG~~syH~q----K~~CasCGy 40 (57)
T 1vq8_1 8 SQGKKNTTT--HTKCRRCGEKSYHTK----KKVCSSCGF 40 (57)
T ss_dssp HHTTCCCCC--EEECTTTCSEEEETT----TTEETTTCT
T ss_pred CCCCCCCCC--CCHHCCCCCHHHHHC----CCCCCCCCC
T ss_conf 445557875--062027582244332----362331588
No 271
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=26.16 E-value=29 Score=14.14 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEE
Q ss_conf 99999999999862896899976888776521246777788999999998629988998567642011112014685255
Q gi|254780820|r 141 GEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHL 220 (284)
Q Consensus 141 geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiii 220 (284)
-+-|..+.|.+.+++-||+++++.-. +-+++ +..++++ .|..-+++..-|-+|-. --.+|.|+-+
T Consensus 39 ~~~ilp~Le~~~~~~rPLlIIAedi~----~eaL~-------~Lv~N~~--~g~l~v~aVkaP~fG~~--r~~~L~DlAi 103 (145)
T 1srv_A 39 VRELLPILEQVAQTGKPLLIIAEDVE----GEALA-------TLVVNKL--RGTLSVAAVKAPGFGDR--RKEMLKDIAA 103 (145)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESEEC----HHHHH-------HHHHHHH--TTSCCEEEEECCSSHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCC----HHHHH-------HHHHHHH--HCCCEEEEEECCCCCHH--HHHHCCHHHH
T ss_conf 99999999999971996799957667----89999-------9999986--08817999939998655--5554425353
Q ss_pred E
Q ss_conf 5
Q gi|254780820|r 221 A 221 (284)
Q Consensus 221 a 221 (284)
.
T Consensus 104 ~ 104 (145)
T 1srv_A 104 V 104 (145)
T ss_dssp H
T ss_pred H
T ss_conf 1
No 272
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=26.15 E-value=25 Score=14.64 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=18.6
Q ss_pred EECCCCCCEEEHHH-HH--------HHCCCCCCCCCCEECCHHH
Q ss_conf 05667687221788-98--------6338388998962437999
Q gi|254780820|r 27 VKCPETGAMVYHKD-LK--------ENQWVISSSDFHMKIPAKE 61 (284)
Q Consensus 27 ~kCp~C~~~i~~~~-l~--------~n~~VCp~C~~H~rl~are 61 (284)
.+|+.|+....... |. +..|.|+.|+.-|.-...-
T Consensus 8 f~C~~C~k~F~~~~~l~~H~~~H~~~~~~~C~~C~~~f~~~~~l 51 (95)
T 2yt9_A 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRM 51 (95)
T ss_dssp EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHH
T ss_conf 09999987839899999999871899885368888742124687
No 273
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1
Probab=25.77 E-value=13 Score=16.80 Aligned_cols=23 Identities=4% Similarity=0.001 Sum_probs=15.9
Q ss_pred CCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 66768722178898633838899896
Q gi|254780820|r 29 CPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 29 Cp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
||+|+..+...+++ +.||+|++.
T Consensus 127 c~~~~~~l~d~~v~---g~cp~~~~~ 149 (722)
T 1rqg_A 127 CEHDKMFLPDRFVI---GTCPYCGAE 149 (722)
T ss_dssp BTTTTBCCCGGGCC---SBCSSSCCS
T ss_pred CCCCCCCCCCHHEE---CCCCCCCCC
T ss_conf 77635261562034---524665654
No 274
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=25.67 E-value=17 Score=15.78 Aligned_cols=26 Identities=12% Similarity=0.280 Sum_probs=18.5
Q ss_pred CCCCCEECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 74601056676872217889863383889989
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
.++.|+ ||+|+.+.|.+. ..|..|+.
T Consensus 3 ~~~DW~-C~~C~~~NFa~R-----~~C~~C~~ 28 (33)
T 2k1p_A 3 SANDWQ-CKTCSNVNWARR-----SECNMCNT 28 (33)
T ss_dssp SSSSCB-CSSSCCBCCTTC-----SBCSSSCC
T ss_pred CCCCCC-CCCCCCEECCCC-----CCCCCCCC
T ss_conf 774775-788979533576-----95548889
No 275
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=25.57 E-value=12 Score=17.00 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=17.2
Q ss_pred EECCCCCCEEEHHHHHH-----------HCCCCCCCCC
Q ss_conf 05667687221788986-----------3383889989
Q gi|254780820|r 27 VKCPETGAMVYHKDLKE-----------NQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~-----------n~~VCp~C~~ 53 (284)
.+|++||..+...|-.+ ..-+|--|-.
T Consensus 5 ~kC~GCG~~lQ~~d~~~~GYvp~~~~~~~~~~C~RC~~ 42 (368)
T 3h2y_A 5 IKCIGCGVEIQTEDKNEVGYAPASSLEKEQVICQRCFR 42 (368)
T ss_dssp --------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEHHHHH
T ss_conf 88589873007778998988867895667778622415
No 276
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=25.33 E-value=10 Score=17.51 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=24.7
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 0566768722178898633838899896243
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
-.||-.+..+..-+++.+.-+||.++..|.+
T Consensus 42 ~~CpH~~~~l~~g~~~~~~i~Cp~Hg~~F~~ 72 (103)
T 2qpz_A 42 NLCTHGSARMSDGYLEGREIECPLHQGRFDV 72 (103)
T ss_dssp SBCSSSSCBGGGSEEETTEEECTTTTCEEET
T ss_pred EECCCCCCCCCCCCCCCCEEEECCCCCEEEC
T ss_conf 6789999644234317999981898989989
No 277
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=25.22 E-value=7.3 Score=18.59 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=23.8
Q ss_pred CCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 601056676872217889863383889989624379
Q gi|254780820|r 24 NLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 24 ~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
.-=.+||.|+..--++. .--.|-|.+|++-|-=.|
T Consensus 25 ~~ky~Cp~Cgk~~vkR~-a~GIW~C~~C~~~~aGGA 59 (73)
T 1ffk_W 25 KKKYKCPVCGFPKLKRA-STSIWVCGHCGYKIAGGA 59 (73)
T ss_pred CCCCCCCCCCCCEEEEE-EEEEEECCCCCCEEECCC
T ss_conf 17760998999777889-988987479999886886
No 278
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.62 E-value=21 Score=15.18 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=24.1
Q ss_pred EECCCCCCEEEH-HHH----HH--------HCCCCCCCCCCEECCHHHHHH
Q ss_conf 056676872217-889----86--------338388998962437999999
Q gi|254780820|r 27 VKCPETGAMVYH-KDL----KE--------NQWVISSSDFHMKIPAKERLK 64 (284)
Q Consensus 27 ~kCp~C~~~i~~-~~l----~~--------n~~VCp~C~~H~rl~areRi~ 64 (284)
.+|+.|+..... ..| .. ..|.|+.|++-|+-...-+.-
T Consensus 19 f~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~y~C~~C~~~f~~~~~L~~H 69 (102)
T 2ghf_A 19 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69 (102)
T ss_dssp EECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHC
T ss_conf 899999987286689999867766786576787989999840857997310
No 279
>3jyw_Y 60S ribosomal protein L37(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=24.48 E-value=22 Score=15.07 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=20.9
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 10566768722178898633838899896
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
-+.|-.||..-|+.. -.+|..|||.
T Consensus 15 H~~CrrCG~~syH~q----K~~CasCGyp 39 (52)
T 3jyw_Y 15 HTLCNRCGRRSFHVQ----KKTCSSCGYP 39 (52)
T ss_dssp EECCSSSCCCCEETT----TCCCSSSCSS
T ss_pred CCHHCCCCCHHCEEC----CCCCCCCCCC
T ss_conf 062007483220314----4602326898
No 280
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.41 E-value=26 Score=14.44 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=22.5
Q ss_pred EECCCCCCEEEHHHH------------HHHCCCCCCCCCCEECCHHHHH
Q ss_conf 056676872217889------------8633838899896243799999
Q gi|254780820|r 27 VKCPETGAMVYHKDL------------KENQWVISSSDFHMKIPAKERL 63 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l------------~~n~~VCp~C~~H~rl~areRi 63 (284)
.+|+.|+...-.+.. ..+.|.|+.|++-|.-...-+.
T Consensus 8 fkC~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~ 56 (78)
T 2d9h_A 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAA 56 (78)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCEECCHHHHHH
T ss_conf 1889997631969999999987137767765463997994079999999
No 281
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=24.07 E-value=26 Score=14.45 Aligned_cols=18 Identities=33% Similarity=0.604 Sum_probs=10.7
Q ss_pred CCEEEEECCCEEECCCHH
Q ss_conf 852555314211023278
Q gi|254780820|r 216 GDIHLAEPGAEIGFAGRR 233 (284)
Q Consensus 216 gDiiiaep~a~igFaG~r 233 (284)
||+.-..|+-.|+|+||.
T Consensus 176 gD~nWIiP~kflAf~~P~ 193 (348)
T 1ohe_A 176 GDLNWIIPDRFIAFCGPH 193 (348)
T ss_dssp TCEEEEETTTEEEECCCC
T ss_pred CCCCCCCCCCEEEECCCC
T ss_conf 875545777558864887
No 282
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=23.88 E-value=32 Score=13.84 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=8.2
Q ss_pred CCCCCEECCCCCCEEEH
Q ss_conf 74601056676872217
Q gi|254780820|r 22 PENLWVKCPETGAMVYH 38 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~ 38 (284)
+...|.-|. .|..++.
T Consensus 59 ~~~~~~i~~-nGa~i~~ 74 (271)
T 1rlm_A 59 KDEISFVAE-NGALVYE 74 (271)
T ss_dssp TTTSEEEEG-GGTEEEE
T ss_pred CCCCCEEEC-CCCEEEE
T ss_conf 877758944-9709996
No 283
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.47 E-value=29 Score=14.12 Aligned_cols=31 Identities=10% Similarity=0.090 Sum_probs=21.7
Q ss_pred CCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 746010566768722178898633838899896
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
+..++.-|-+|+..+--+. ...--|.+|||-
T Consensus 24 ~~~v~YiCg~Cg~~~~l~~--~d~IrC~~CG~R 54 (70)
T 1twf_L 24 TATLKYICAECSSKLSLSR--TDAVRCKDCGHR 54 (70)
T ss_dssp -CCCCEECSSSCCEECCCT--TSTTCCSSSCCC
T ss_pred CCCEEEECCCCCCCEEECC--CCCEECCCCCCE
T ss_conf 8516888867998116289--998877848857
No 284
>3g1w_A Sugar ABC transporter; sugar-binding protein, target 11229F, transport protein, structural genomics, PSI-2; 2.02A {Bacillus halodurans c-125}
Probab=23.26 E-value=33 Score=13.76 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=14.1
Q ss_pred HHHHCCCCCEEE--CHHHHH-HHHHHHHHHH
Q ss_conf 999689835373--589999-9999999997
Q gi|254780820|r 252 YLVEHGMIDRIV--HRHDIP-EVVSSLCKIL 279 (284)
Q Consensus 252 ~l~~~G~iD~iv--~r~~l~-~~i~~ll~il 279 (284)
-.++.|.++..+ +..++- ..+..+++++
T Consensus 228 ~~i~~g~i~atv~~~~~~~G~~av~~l~~~~ 258 (305)
T 3g1w_A 228 DLVDEGIISATLAQGTWNMGYWSLTYLFHLH 258 (305)
T ss_dssp HHHHTTSSCEEEEECHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 9998599569992899999999999999997
No 285
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.08 E-value=9.5 Score=17.73 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=20.7
Q ss_pred CCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHH
Q ss_conf 47746010566768722178898633838899896243799
Q gi|254780820|r 20 AIPENLWVKCPETGAMVYHKDLKENQWVISSSDFHMKIPAK 60 (284)
Q Consensus 20 ~ip~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~ar 60 (284)
.+++. ..||-|.+.+.. -.+. .|||.|=...-
T Consensus 15 ~l~~~--l~CpIC~~~~~~------pv~~-~CgH~fC~~Ci 46 (85)
T 2ecw_A 15 MIKEE--VTCPICLELLKE------PVSA-DCNHSFCRACI 46 (85)
T ss_dssp CCCTT--TSCTTTCSCCSS------CEEC-TTSCCBCHHHH
T ss_pred HCCCC--CCCCCCCCCCCC------EEEC-CCCCCHHHHHH
T ss_conf 66223--998494832078------0688-89973659999
No 286
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=23.06 E-value=19 Score=15.55 Aligned_cols=95 Identities=21% Similarity=0.258 Sum_probs=58.8
Q ss_pred HHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECCCHHHHH--------HHHCCCCCCCCH-----HHH
Q ss_conf 9999986299889985676420111120146852555314211023278878--------763677887202-----159
Q gi|254780820|r 185 AINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVIE--------QTVREKLPDGFQ-----RSE 251 (284)
Q Consensus 185 a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep~a~igFaG~rVi~--------~t~~~~lp~~fq-----tae 251 (284)
|+..|.+-.-++..|+.|-..==+.++----||+++-.||..|-.-| +|++ ..+||.+|-... -|.
T Consensus 2 ai~~L~~l~p~~a~V~rdg~~~~i~~~~l~~GDiv~v~~Gd~IPaDg-~v~~g~~~vdes~lTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDG-VVVEGESYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEE-EEEECCEEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEECCE-EEEECCCCCCCHHHCCCCCCEEECCCCEEEEE
T ss_conf 77976416999899999999999999997669999988999995172-67206313340555499633480689999876
Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHH
Q ss_conf 99968983537358999999999999972
Q gi|254780820|r 252 YLVEHGMIDRIVHRHDIPEVVSSLCKILT 280 (284)
Q Consensus 252 ~l~~~G~iD~iv~r~~l~~~i~~ll~il~ 280 (284)
.+...|.+...|.+.--..+++++++++-
T Consensus 81 t~~~~g~~~~~v~~~g~~t~~~~i~~lv~ 109 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVE 109 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHH
T ss_pred EEEEEEEEEEEEEEEECCCHHHHHHHHHH
T ss_conf 59905899999999805789999999999
No 287
>2qy9_A Cell division protein FTSY; SRP receptor, protein targeting, simibi class GTPase, cell cycle, GTP-binding, inner membrane, membrane; 1.90A {Escherichia coli} SCOP: a.24.13.1 c.37.1.10 PDB: 1fts_A
Probab=22.97 E-value=33 Score=13.72 Aligned_cols=88 Identities=19% Similarity=0.267 Sum_probs=49.6
Q ss_pred EECEEEEEEEEECH------------------HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 70414999998330------------------318535778999999999999862896899976888776521246777
Q gi|254780820|r 117 VRDFKLVAVVHEFS------------------FIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQ 178 (284)
Q Consensus 117 I~G~~vvv~~~df~------------------F~GGSmG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~q 178 (284)
-+|..|++++.|-. |....-+.--..-+-++++.|..++..+|++-. .| |+|-...-+.+
T Consensus 125 ~~~~~V~lva~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~d~~~i~~~~~~~a~~~~~D~vliDT-aG-R~~~~~~lm~E 202 (309)
T 2qy9_A 125 QQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADT-AG-RLQNKSHLMEE 202 (309)
T ss_dssp TTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHHHHTTCSEEEECC-CC-CGGGHHHHHHH
T ss_pred HCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECC-CC-CCCCCHHHHHH
T ss_conf 56776148644530654999999987524983773378887999999999999976998999689-88-77678999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEC-CCCCCE
Q ss_conf 78899999999862998899856-764201
Q gi|254780820|r 179 LPRTTIAINMLKDAGLPYIVVLT-NPTTGG 207 (284)
Q Consensus 179 Makt~~a~~~l~~~~lP~I~vl~-~pt~GG 207 (284)
|.+....++++ ...-|.-++|+ +.++|-
T Consensus 203 L~~i~~~~~~~-~~~~p~e~~LVlda~~g~ 231 (309)
T 2qy9_A 203 LKKIVRVMKKL-DVEAPHEVMLTIDASTGQ 231 (309)
T ss_dssp HHHHHHHHTTT-CTTCCSEEEEEEEGGGTH
T ss_pred HHHHHHHHHHH-CCCCCCEEEEECCCCCCH
T ss_conf 99999998753-367872456510032337
No 288
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=22.85 E-value=23 Score=14.89 Aligned_cols=24 Identities=17% Similarity=0.194 Sum_probs=19.2
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCE
Q ss_conf 05667687221788986338388998962
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHM 55 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~ 55 (284)
..|..|++.||. +-+-|..|++..
T Consensus 36 t~C~~C~~~i~~-----~g~~C~~C~~~~ 59 (72)
T 2fnf_X 36 GWCDLCGREVLR-----QALRCANCKFTC 59 (72)
T ss_dssp CBCTTTSSBCSS-----CCEECTTSSCEE
T ss_pred CCCHHHCHHHHH-----CCCEECCCCCHH
T ss_conf 496013855796-----285708898935
No 289
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=22.76 E-value=15 Score=16.19 Aligned_cols=33 Identities=3% Similarity=0.038 Sum_probs=20.7
Q ss_pred EECCCCCC-----EEEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 05667687-----2217889863383889989624379
Q gi|254780820|r 27 VKCPETGA-----MVYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 27 ~kCp~C~~-----~i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
+.|..-+. .+|-+-=+++.-+||+|+.-|+..+
T Consensus 25 v~CdGg~~~lgHP~Vyl~~~~~~~v~CpYC~~~fv~~~ 62 (87)
T 2jz8_A 25 FMCVGATQPFDHPHIFIDMGSTDEKICPYCSTLYRYDP 62 (87)
T ss_dssp EECCCSSCSSSSSSCEEECTTCCEECCTTTCCEEECCT
T ss_pred EEECCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECC
T ss_conf 99749999999998978869999798889998888377
No 290
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=22.73 E-value=33 Score=13.69 Aligned_cols=58 Identities=14% Similarity=0.229 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEC
Q ss_conf 999999999986289689997688877652124677778899999999862998899856764201111201
Q gi|254780820|r 142 EAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYA 213 (284)
Q Consensus 142 eki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a 213 (284)
+-+.++.+.+.+.+..+|+- -+|| |.+-.+|..+. ..++|+|+|-|-+.+|....+++
T Consensus 73 ~~v~~~~~~~~~~~~D~Iva-vGGG--------s~~D~aK~~A~-----~~~~p~i~IPTt~~t~se~t~~a 130 (370)
T 1jq5_A 73 NEVERIANIARKAEAAIVIG-VGGG--------KTLDTAKAVAD-----ELDAYIVIVPTAASTDAPTSALS 130 (370)
T ss_dssp HHHHHHHHHHHHTTCSEEEE-EESH--------HHHHHHHHHHH-----HHTCEEEEEESSCCSSCTTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEE-CCCC--------CCCCHHHHHHC-----CCCCCEEEECCCCCCCCCCCCEE
T ss_conf 99999999976048878997-3786--------30201212210-----14663255236434665667706
No 291
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.71 E-value=28 Score=14.24 Aligned_cols=14 Identities=7% Similarity=0.062 Sum_probs=6.1
Q ss_pred CCCCCCCCCEECCH
Q ss_conf 83889989624379
Q gi|254780820|r 46 WVISSSDFHMKIPA 59 (284)
Q Consensus 46 ~VCp~C~~H~rl~a 59 (284)
|.|+.|+.-|.-..
T Consensus 38 ~~C~~C~~~f~~~~ 51 (110)
T 2csh_A 38 YGCGVCGKKFKMKH 51 (110)
T ss_dssp EECTTTSCEESSSH
T ss_pred EECCCCCCCCCCHH
T ss_conf 46885565433201
No 292
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=22.70 E-value=19 Score=15.43 Aligned_cols=30 Identities=3% Similarity=0.173 Sum_probs=17.2
Q ss_pred CCCCCEECCCCCCEEEHHHH------------HHHCCCCCCC
Q ss_conf 74601056676872217889------------8633838899
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDL------------KENQWVISSS 51 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l------------~~n~~VCp~C 51 (284)
.++.|+.|..|..-++..=+ ....|+||.|
T Consensus 26 ~~~~mi~Cd~C~~w~H~~C~~~~~~~~~~~~~~~~~w~C~~C 67 (76)
T 1wem_A 26 NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 67 (76)
T ss_dssp CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHH
T ss_pred CCCCEEEECCCCCCCCHHHCCCCHHCCCCCCCCCCCEECCCC
T ss_conf 999688839999366774559871001214789981899688
No 293
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics, structural proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=22.48 E-value=34 Score=13.65 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=63.3
Q ss_pred HHCCCCCCCCCCCCCC---CCHHCCCCC------CCCHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 8455654201334568---702018676------4203566776664216677169998787041499999833031853
Q gi|254780820|r 65 FLFDNAKYCLLDQPQV---CQDPLKFRD------NKKYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 65 ~l~D~gsf~Ei~~~~~---~~DPL~F~d------~k~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
.+|.+|.++++...+. ...+|=..| ..++-|++.++-++.|.. + .-++.+
T Consensus 14 i~fG~g~l~~l~~~~~~~g~kkvlivt~~~~~~~~~~~~~~v~~~L~~~gi~--~-~vf~~v------------------ 72 (387)
T 3bfj_A 14 NFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIE--V-AIFDGV------------------ 72 (387)
T ss_dssp EEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCE--E-EEECCC------------------
T ss_pred EEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHCCCE--E-EEECCC------------------
T ss_conf 8988099999999999739986999989767861156999999999976995--9-998373------------------
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-------------HHCCCCEEEEECC
Q ss_conf 577899999999999986289689997688877652124677778899999999-------------8629988998567
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML-------------KDAGLPYIVVLTN 202 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l-------------~~~~lP~I~vl~~ 202 (284)
-+...-+-+.++++.+.+.+..+|+ .-+|| |-|-.+|..+.+-.. ....+|.|++-|-
T Consensus 73 ~~~p~~~~v~~~~~~~~~~~~D~Ii-avGGG--------s~iD~aK~va~~~~~~~~~~~~~~~~~~~~~~~p~~~vpTt 143 (387)
T 3bfj_A 73 EPNPKDTNVRDGLAVFRREQCDIIV-TVGGG--------SPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTT 143 (387)
T ss_dssp CSSCBHHHHHHHHHHHHHTTCCEEE-EEESH--------HHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEE-ECCCC--------CCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEECCC
T ss_conf 6899999999999988733998899-80886--------40008888999970898778860554343467855674156
Q ss_pred CCCCE
Q ss_conf 64201
Q gi|254780820|r 203 PTTGG 207 (284)
Q Consensus 203 pt~GG 207 (284)
+++|.
T Consensus 144 a~tgs 148 (387)
T 3bfj_A 144 AGTAS 148 (387)
T ss_dssp TTCCG
T ss_pred CCCCC
T ss_conf 45643
No 294
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=22.28 E-value=16 Score=15.99 Aligned_cols=34 Identities=9% Similarity=0.154 Sum_probs=19.9
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEECCHHHHHHHHCCC
Q ss_conf 0566768722178898633838899896243799999984556
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMKIPAKERLKFLFDN 69 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl~areRi~~l~D~ 69 (284)
.+||=|.+.+..+ .+.+.|||.|--.+ |...++.
T Consensus 182 l~CPI~~~~m~dP------V~~~~CgHtfer~~---I~~~l~~ 215 (267)
T 3htk_C 182 LTCPITCKPYEAP------LISRKCNHVFDRDG---IQNYLQG 215 (267)
T ss_dssp SBCTTTSSBCSSE------EEESSSCCEEEHHH---HHHHSTT
T ss_pred EECCCCCHHHHCC------CCCCCCCCEECHHH---HHHHHHH
T ss_conf 5895848387636------54487998437999---9999985
No 295
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzymes, ligase, drug design, ATP-binding, cytoplasm, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=22.19 E-value=34 Score=13.61 Aligned_cols=69 Identities=19% Similarity=0.385 Sum_probs=27.8
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 31853577899999999999986-2896899976888776521246777788999999998629988998567642011
Q gi|254780820|r 131 FIGGSIGIAAGEAIVKSCERAIA-EKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGV 208 (284)
Q Consensus 131 F~GGSmG~~~geki~~a~e~A~~-~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv 208 (284)
|--|+|-...--.=.+..-.+.+ .+.++-.+...|. +|||-+||+.-||- . ++..-.+|+..||+-=+.
T Consensus 7 ~~~~~m~i~~~~~e~~~~~~~~r~~g~~ig~VPTMGa--LH~GHlsLI~~A~~------~-~~d~vvVSIFVNP~QF~~ 76 (301)
T 3cov_A 7 FHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGA--LHEGHLALVRAAKR------V-PGSVVVVSIFVNPMQFGA 76 (301)
T ss_dssp CCTTSCEEECSHHHHHHHHHHHHHTTCEEEEEEECSC--CCHHHHHHHHHHHT------S-TTEEEEEEECCCGGGCCS
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCH--HHHHHHHHHHHHHH------C-CCCEEEEEEECCCCCCCC
T ss_conf 8887349986899999999999982990899968721--75999999999865------2-799799999627534787
No 296
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=22.05 E-value=34 Score=13.60 Aligned_cols=13 Identities=38% Similarity=0.478 Sum_probs=6.6
Q ss_pred CEEEEEEEEECHH
Q ss_conf 4149999983303
Q gi|254780820|r 119 DFKLVAVVHEFSF 131 (284)
Q Consensus 119 G~~vvv~~~df~F 131 (284)
..+|++...|-.|
T Consensus 143 ~k~vaii~~~~~~ 155 (392)
T 3lkb_A 143 GAKVALVVHPSPF 155 (392)
T ss_dssp TCEEEEEECSSHH
T ss_pred CCEEEEEECCCHH
T ss_conf 9779999368706
No 297
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=22.04 E-value=31 Score=13.88 Aligned_cols=21 Identities=10% Similarity=0.049 Sum_probs=15.6
Q ss_pred CCCCCEECCCCCCEEEHHHHHHHCCCCCCCCCCE
Q ss_conf 7460105667687221788986338388998962
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDLKENQWVISSSDFHM 55 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l~~n~~VCp~C~~H~ 55 (284)
-..+|+.|..|. .|+.|..|-
T Consensus 41 Ss~~wv~~~~C~-------------~~~~c~~~~ 61 (361)
T 1mpp_A 41 SSDTWVPHKGCD-------------NSEGCVGKR 61 (361)
T ss_dssp CCCCEEEBTTCC-------------GGGTCCSSC
T ss_pred CCCCEECCCCCC-------------CCCCCCCCC
T ss_conf 753284158999-------------874436899
No 298
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=21.99 E-value=35 Score=13.59 Aligned_cols=28 Identities=7% Similarity=0.228 Sum_probs=18.4
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCC
Q ss_conf 0566768722178898633838899896
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFH 54 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H 54 (284)
.+|..|+-...++=+.+.-.+|+.|+-+
T Consensus 55 ~~C~~C~~~~Hk~C~~~~~~~c~pC~~~ 82 (84)
T 2row_A 55 LECRRCHIKCHKDHMDKKEEIIAPCKVY 82 (84)
T ss_dssp EEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred EECCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 0778798944354531388858887778
No 299
>2avu_E Flagellar transcriptional activator FLHC; C4-type zinc finger, transcription activator; 3.00A {Escherichia coli} SCOP: e.64.1.1
Probab=21.82 E-value=14 Score=16.51 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=13.8
Q ss_pred CHHHCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 303185357789999999999998628
Q gi|254780820|r 129 FSFIGGSIGIAAGEAIVKSCERAIAEK 155 (284)
Q Consensus 129 f~F~GGSmG~~~geki~~a~e~A~~~~ 155 (284)
+.|+.+.-+...-|.+++|+.+=.+.-
T Consensus 80 Y~~l~~~~~~~~ieAlikAYrlY~e~~ 106 (192)
T 2avu_E 80 WQFLLKTGLCNGVDAVIKAYRLYLEQC 106 (192)
T ss_dssp HHHHHHTTTCCSHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 999974348898999999999999973
No 300
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=21.57 E-value=11 Score=17.28 Aligned_cols=31 Identities=3% Similarity=0.148 Sum_probs=20.1
Q ss_pred CCCCCEECCCCCCEEEHH-------HHHH-HCCCCCCCC
Q ss_conf 746010566768722178-------8986-338388998
Q gi|254780820|r 22 PENLWVKCPETGAMVYHK-------DLKE-NQWVISSSD 52 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~-------~l~~-n~~VCp~C~ 52 (284)
++..|+.|..|..=.+.. +... +.|.||+|-
T Consensus 16 ~~~fmI~CD~C~~WfH~~Cl~~~~~ev~~idky~C~~C~ 54 (447)
T 3kv4_A 16 VTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54 (447)
T ss_dssp TTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHH
T ss_pred CCCEEEECCCCCCCEECEECCCCHHHCCCCCEEECCCCC
T ss_conf 986588899999977166289863417998667897981
No 301
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=21.56 E-value=34 Score=13.62 Aligned_cols=15 Identities=40% Similarity=0.756 Sum_probs=11.0
Q ss_pred CCCCEECCCCCCEEE
Q ss_conf 460105667687221
Q gi|254780820|r 23 ENLWVKCPETGAMVY 37 (284)
Q Consensus 23 ~~lW~kCp~C~~~i~ 37 (284)
+.+.++||.|+..+-
T Consensus 6 ~~~~v~CP~C~k~v~ 20 (68)
T 1lv3_A 6 ETITVNCPTCGKTVV 20 (68)
T ss_dssp CCCEEECTTTCCEEE
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 885214889998444
No 302
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=21.56 E-value=20 Score=15.39 Aligned_cols=31 Identities=3% Similarity=0.093 Sum_probs=21.9
Q ss_pred CCCCCEECCCCCCEEEHHHH-----HH---HCCCCCCCC
Q ss_conf 74601056676872217889-----86---338388998
Q gi|254780820|r 22 PENLWVKCPETGAMVYHKDL-----KE---NQWVISSSD 52 (284)
Q Consensus 22 p~~lW~kCp~C~~~i~~~~l-----~~---n~~VCp~C~ 52 (284)
++..|+.|..|..-.+..=+ +. ..|.||+|-
T Consensus 48 ~~~fmI~Cd~C~~wfH~~C~~~~~~~~~~i~~~~C~~C~ 86 (488)
T 3kv5_D 48 VNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86 (488)
T ss_dssp TTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHH
T ss_pred CCCEEEECCCCCCCEECCCCCCCHHCCCCCCEEECCCCC
T ss_conf 882799899999985574789972205777368996994
No 303
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=21.48 E-value=33 Score=13.77 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=20.2
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCCCEE
Q ss_conf 056676872217889863383889989624
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDFHMK 56 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~H~r 56 (284)
..|..|++.|+. .-+.|..|++..-
T Consensus 23 t~C~~C~~~i~~-----qg~~C~~C~~~~H 47 (59)
T 1rfh_A 23 GWCDLCGREVLR-----QALRCANCKFTCH 47 (59)
T ss_dssp EECTTTCSEECS-----CCEECTTTSCEEC
T ss_pred CCCCCCCHHHHH-----CCCCCCCCCCHHH
T ss_conf 797003835787-----5766698998462
No 304
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=21.33 E-value=30 Score=14.02 Aligned_cols=13 Identities=0% Similarity=-0.220 Sum_probs=6.5
Q ss_pred CCCCCCCCCCEEC
Q ss_conf 3838899896243
Q gi|254780820|r 45 QWVISSSDFHMKI 57 (284)
Q Consensus 45 ~~VCp~C~~H~rl 57 (284)
.+.|+.|+.-|.-
T Consensus 57 ~~~C~~C~~~f~~ 69 (82)
T 2kmk_A 57 PHKCQVCGKAFSQ 69 (82)
T ss_dssp CEECTTTSCEESS
T ss_pred CCCCCCCCCCCCC
T ss_conf 9767888998488
No 305
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} SCOP: e.22.1.2
Probab=21.32 E-value=36 Score=13.49 Aligned_cols=120 Identities=21% Similarity=0.205 Sum_probs=63.8
Q ss_pred HHHCCCCCCCCCCCCCC---CCHHCCCCCCC-----CHHHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEEEECHHHCCC
Q ss_conf 98455654201334568---70201867642-----03566776664216677169998787041499999833031853
Q gi|254780820|r 64 KFLFDNAKYCLLDQPQV---CQDPLKFRDNK-----KYIDRLKENRSKTGLIDSIVSAVGNVRDFKLVAVVHEFSFIGGS 135 (284)
Q Consensus 64 ~~l~D~gsf~Ei~~~~~---~~DPL~F~d~k-----~Y~drl~~a~~kTg~~davv~G~G~I~G~~vvv~~~df~F~GGS 135 (284)
+++|.+|+..++...+. ...+|=..|.. ++.+++.+.-++.|.. +. .+ .+-
T Consensus 23 ~i~fG~g~l~~l~~~l~~~g~kkvliVt~~~~~~~~g~~~~v~~~L~~~gi~--------------~~--~f-----~~v 81 (407)
T 1vlj_A 23 KIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIE--------------WV--EV-----SGV 81 (407)
T ss_dssp EEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCE--------------EE--EE-----CCC
T ss_pred EEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCCCE--------------EE--EE-----CCC
T ss_conf 5998629999999999965998589998875788752999999999865993--------------99--98-----570
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-------------HHCCCCEEEEECC
Q ss_conf 577899999999999986289689997688877652124677778899999999-------------8629988998567
Q gi|254780820|r 136 IGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINML-------------KDAGLPYIVVLTN 202 (284)
Q Consensus 136 mG~~~geki~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l-------------~~~~lP~I~vl~~ 202 (284)
-..-.-+-+.++.+.+.+.+.-+|+= -+|| |-|-.+|..+++... ...++|+|+|-|-
T Consensus 82 ~~~pt~~~v~~~~~~~~~~~~D~IIa-vGGG--------S~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~lP~i~iPTt 152 (407)
T 1vlj_A 82 KPNPVLSKVHEAVEVAKKEKVEAVLG-VGGG--------SVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTI 152 (407)
T ss_dssp CSSCBHHHHHHHHHHHHHTTCSEEEE-EESH--------HHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEE-CCCC--------CHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEECCC
T ss_conf 79999999999999997459978995-4996--------34156888999875134047763366555778986675388
Q ss_pred CCCCEEEEEEC
Q ss_conf 64201111201
Q gi|254780820|r 203 PTTGGVTASYA 213 (284)
Q Consensus 203 pt~GGv~AS~a 213 (284)
+.||.-..+++
T Consensus 153 agTgse~t~~a 163 (407)
T 1vlj_A 153 SATGTEMNGNA 163 (407)
T ss_dssp CSSCGGGSSEE
T ss_pred CCCCHHHCCCE
T ss_conf 86315426844
No 306
>1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} SCOP: c.1.21.1 PDB: 1ad4_A*
Probab=21.31 E-value=36 Score=13.49 Aligned_cols=125 Identities=13% Similarity=0.187 Sum_probs=68.5
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-EEEE--EECCCCCE---E
Q ss_conf 9999998628968999768887765212467777889999999986299889985676420-1111--20146852---5
Q gi|254780820|r 146 KSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTG-GVTA--SYAMLGDI---H 219 (284)
Q Consensus 146 ~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~G-Gv~A--S~a~lgDi---i 219 (284)
..++.+.+.++|+|+.-..+...-..-+..+. .--...+.++.++|++---++.||-.| |-+. ++..+-.+ .
T Consensus 112 ~m~~~va~~~~~~ilmH~~~~~~~~~~~~~v~--~~~~~~~~~~~~~Gi~~~~IilDPGiGFgKt~~~n~~ll~~l~~~~ 189 (266)
T 1ad1_A 112 RMFQVVAKYDAEIVLMHNGNGNRDEPVVEEML--TSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELV 189 (266)
T ss_dssp HHHHHHHHTTCEEEEECCCCTTCCSCHHHHHH--HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCHHHHH--HHHHHHHHHHHHCCCCHHCEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 28999971499868720786655431000133--5789999999975986313886476366767210499999799972
Q ss_pred -EEECCCEEECCCHHHHHHHHCCCC-CCCCH--H---HHHHHHCCC-CCEEECHHHHHHHHH
Q ss_conf -553142110232788787636778-87202--1---599996898-353735899999999
Q gi|254780820|r 220 -LAEPGAEIGFAGRRVIEQTVREKL-PDGFQ--R---SEYLVEHGM-IDRIVHRHDIPEVVS 273 (284)
Q Consensus 220 -iaep~a~igFaG~rVi~~t~~~~l-p~~fq--t---ae~l~~~G~-iD~iv~r~~l~~~i~ 273 (284)
+.-| -++|.+=++.|.+.++.+. |++.. | +-+++.+|. |=.+=+=++.++.+.
T Consensus 190 ~~~~P-iLvG~SRKsfi~~l~g~~~~~~~r~~~tla~~~~a~~~Ga~iiRvHDV~~~~~~~~ 250 (266)
T 1ad1_A 190 ATEYP-VLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAK 250 (266)
T ss_dssp TTCSC-BEECCTTSHHHHTTSSSCCCGGGGHHHHHHHHHHHHHHTCCEEEESCHHHHHHHHH
T ss_pred CCCCC-EEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 47986-79962478899997568998787428999999999987999999499799999999
No 307
>1w77_A 2C-methyl-D-erythritol 4-phosphate cytidylyltransferase; plantherbicide, non-mevalonate pathway, isoprenoid; HET: C5P; 2.00A {Arabidopsis thaliana} SCOP: c.68.1.13
Probab=21.26 E-value=34 Score=13.63 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=12.4
Q ss_pred CCCCCCCCHHHHHHHHC
Q ss_conf 67788720215999968
Q gi|254780820|r 240 REKLPDGFQRSEYLVEH 256 (284)
Q Consensus 240 ~~~lp~~fqtae~l~~~ 256 (284)
+-.-|+|+-.||.+|++
T Consensus 210 kIttpeDL~~Ae~lL~~ 226 (228)
T 1w77_A 210 KVTTPDDLLLAERILSE 226 (228)
T ss_dssp CCCSHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 87999999999999861
No 308
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=21.17 E-value=36 Score=13.47 Aligned_cols=64 Identities=23% Similarity=0.287 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC
Q ss_conf 99999999862896899976888776521246777788999999998629988998567642011112014685255531
Q gi|254780820|r 144 IVKSCERAIAEKCPLVMFTASGGARMQEGILSLMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEP 223 (284)
Q Consensus 144 i~~a~e~A~~~~~PlI~~~~SGGaRMqEG~~sL~qMakt~~a~~~l~~~~lP~I~vl~~pt~GGv~AS~a~lgDiiiaep 223 (284)
+.+..+.-.+.+-=||+++.||.. +-+..|+..-++.|+++|++...+ ||.. +-++|+.|--|
T Consensus 121 f~~ql~~~~~~gDvli~iS~SG~s------------~nvi~al~~Ak~~G~~ti~lTg~~--g~~l---~~~~Di~I~vp 183 (212)
T 2i2w_A 121 FSRYVEAVGREGDVLLGISTSGNS------------ANVIKAIAAAREKGMKVITLTGKD--GGKM---AGTADIEIRVP 183 (212)
T ss_dssp HHHHHHHHCCTTCEEEEECSSSCC------------HHHHHHHHHHHHHTCEEEEEEETT--CGGG---TTCSSEEEEEC
T ss_pred HHHHHHHHCCCCCEEEEEECCCCC------------CCHHHHHHHHHHCCCEEEEEECCC--CCHH---HHHCCEEEECC
T ss_conf 999999857898879998089998------------328999999998599899997788--7336---77399899869
Q ss_pred C
Q ss_conf 4
Q gi|254780820|r 224 G 224 (284)
Q Consensus 224 ~ 224 (284)
.
T Consensus 184 s 184 (212)
T 2i2w_A 184 H 184 (212)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 309
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=21.13 E-value=26 Score=14.49 Aligned_cols=18 Identities=6% Similarity=0.012 Sum_probs=12.3
Q ss_pred CCCCCCCCCCEECCHHHH
Q ss_conf 383889989624379999
Q gi|254780820|r 45 QWVISSSDFHMKIPAKER 62 (284)
Q Consensus 45 ~~VCp~C~~H~rl~areR 62 (284)
-|+|+.|+.-|.-+..-.
T Consensus 2 p~~C~~C~k~F~~~~~L~ 19 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLK 19 (29)
T ss_dssp CCBCTTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCHHHHC
T ss_conf 836889879987705822
No 310
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=21.09 E-value=36 Score=13.46 Aligned_cols=29 Identities=17% Similarity=0.086 Sum_probs=20.4
Q ss_pred EEEEEECCCCCEEEEECCCEEECCCHHHH
Q ss_conf 11112014685255531421102327887
Q gi|254780820|r 207 GVTASYAMLGDIHLAEPGAEIGFAGRRVI 235 (284)
Q Consensus 207 Gv~AS~a~lgDiiiaep~a~igFaG~rVi 235 (284)
.+++||+...--+..--.|.++|+-|-|=
T Consensus 83 sf~lrF~Gvp~~l~IP~~AI~af~dpevg 111 (176)
T 2nys_A 83 EIGLSFSDTPEKLVIPYNAIRGFYDPSVN 111 (176)
T ss_dssp EEEEEETTEEEEEEEEGGGEEEEEEGGGT
T ss_pred EEEEEECCEEEEEEEEHHHEEEEECCCCC
T ss_conf 99999899607999875780165676778
No 311
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=20.73 E-value=2.7 Score=21.80 Aligned_cols=32 Identities=9% Similarity=0.286 Sum_probs=23.0
Q ss_pred EECCCCCCE---EEHHHHHHHCCCCCCCCCCEECCH
Q ss_conf 056676872---217889863383889989624379
Q gi|254780820|r 27 VKCPETGAM---VYHKDLKENQWVISSSDFHMKIPA 59 (284)
Q Consensus 27 ~kCp~C~~~---i~~~~l~~n~~VCp~C~~H~rl~a 59 (284)
..|.+|+.. ++.++-. ...+|..||-++++.-
T Consensus 8 ~~C~NC~t~~TpLWRR~~~-G~~lCNACGLy~klhg 42 (63)
T 3dfx_A 8 TSCANCQTTTTTLWRRNAN-GDPVCNACGLYYKLHN 42 (63)
T ss_dssp CCCTTTCCSCCSSCCCCTT-SCCCCHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCEEEECCC-CCEEEEHHHHHHHHHC
T ss_conf 7456889865420658899-8982114577899848
No 312
>1ryq_A DNA-directed RNA polymerase, subunit E''; structural genomics, zinc, PSI, protein structure initiative; 1.38A {Pyrococcus furiosus} SCOP: g.41.9.3
Probab=20.54 E-value=20 Score=15.27 Aligned_cols=20 Identities=5% Similarity=-0.092 Sum_probs=14.9
Q ss_pred EECCCCCCEEEHHHHHHHCCCCCCCCC
Q ss_conf 056676872217889863383889989
Q gi|254780820|r 27 VKCPETGAMVYHKDLKENQWVISSSDF 53 (284)
Q Consensus 27 ~kCp~C~~~i~~~~l~~n~~VCp~C~~ 53 (284)
.-|-+|+-++-. .+||+|+-
T Consensus 12 rAC~~C~~i~~~-------~~CPnCgs 31 (69)
T 1ryq_A 12 KACRHCHYITSE-------DRCPVCGS 31 (69)
T ss_dssp EEETTTCBEESS-------SSCTTTCC
T ss_pred HHHHHCCCCCCC-------CCCCCCCC
T ss_conf 347519876579-------97979849
No 313
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=20.33 E-value=21 Score=15.19 Aligned_cols=12 Identities=0% Similarity=0.277 Sum_probs=8.3
Q ss_pred CCCCCCCCCCEE
Q ss_conf 383889989624
Q gi|254780820|r 45 QWVISSSDFHMK 56 (284)
Q Consensus 45 ~~VCp~C~~H~r 56 (284)
-+.||+|.|..+
T Consensus 3 d~~cpkc~y~ap 14 (28)
T 2jvx_A 3 DFCCPKCQYQAP 14 (28)
T ss_dssp CEECTTSSCEES
T ss_pred CCCCCCCCCCCC
T ss_conf 643773012389
No 314
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 3m99_A
Probab=20.30 E-value=15 Score=16.27 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=19.1
Q ss_pred CEECCCCCCEEEHHHHHHHCCCCCCCCCCEEC
Q ss_conf 10566768722178898633838899896243
Q gi|254780820|r 26 WVKCPETGAMVYHKDLKENQWVISSSDFHMKI 57 (284)
Q Consensus 26 W~kCp~C~~~i~~~~l~~n~~VCp~C~~H~rl 57 (284)
..+|..|+... ..|+|+|-.|||-..-
T Consensus 48 ~~~C~~c~~~~-----~~~l~~CL~Cg~~gcg 74 (476)
T 3mhs_A 48 TMKCGTCHEIN-----SGATFMCLQCGFCGCW 74 (476)
T ss_dssp HSBCTTTCCBC-----SSSEEEESSSSCEEET
T ss_pred CCCCCCCCCCC-----CCCEEEECCCCCCCCC
T ss_conf 87478777888-----9955997589987669
No 315
>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=20.23 E-value=19 Score=15.57 Aligned_cols=53 Identities=8% Similarity=0.160 Sum_probs=22.3
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCC-EEEEEE--------EEECEEEEEE
Q ss_conf 5420133456870201867642035667766642166771-699987--------8704149999
Q gi|254780820|r 70 AKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDS-IVSAVG--------NVRDFKLVAV 125 (284)
Q Consensus 70 gsf~Ei~~~~~~~DPL~F~d~k~Y~drl~~a~~kTg~~da-vv~G~G--------~I~G~~vvv~ 125 (284)
..|+-+|....+.|+..|+ .|..++..+..+.-.+-+ ++||+| ++.|++++++
T Consensus 37 ~g~ev~D~G~~~~~~~DYp---d~a~~va~~V~~~~~~~GIliCGtG~G~sIaANK~~GIRAal~ 98 (155)
T 1o1x_A 37 KGIEVEDHGTYSEESVDYP---DYAKKVVQSILSNEADFGILLCGTGLGMSIAANRYRGIRAALC 98 (155)
T ss_dssp TTCEEEECCCCSSSCCCHH---HHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHTTSTTCCEEEC
T ss_pred CCCEEEECCCCCCCCCCCH---HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEE
T ss_conf 7998997899987777831---7899999997347763479964898799999736898599996
No 316
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.23 E-value=37 Score=13.33 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=11.4
Q ss_pred HHHHHHHHHHCCCEEEEE
Q ss_conf 999999986289689997
Q gi|254780820|r 145 VKSCERAIAEKCPLVMFT 162 (284)
Q Consensus 145 ~~a~e~A~~~~~PlI~~~ 162 (284)
.+.++.+++.++|+|.=+
T Consensus 82 ~~l~~~~v~~rvpvi~Gv 99 (344)
T 2hmc_A 82 MEGVERLVKAGIPVIVGT 99 (344)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEC
T ss_conf 999999973388689967
Done!