RPSBLAST alignment of GI: 254780820 and protein with PDBid: 3n6r
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114} Length = 531
Score = 117 bits (293), Expect = 4e-27
Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 13/218 (5%)
Query: 56 KIPAKERLKFLFDNAKYCLLDQPQVCQDPLKFRDNKKYIDRLKENRSKTGLIDSIVSAVG 115
K+ A+ER+ L D + D F ++ +++ + D +V+ G
Sbjct: 53 KLTARERVDLLLDEGSFEEFDM---------FVTHRCTDFNMQD---QKPAGDGVVTGWG 100
Query: 116 NVRDFKLVAVVHEFSFIGGSIGIAAGEAIVKSCERAIAEKCPLVMFTASGGARMQEGILS 175
+ + +F+ +GGS+ + I K + A+ P++ SGGAR+QEG+ S
Sbjct: 101 TINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDS 160
Query: 176 LMQLPRTTIAINMLKDAGLPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGRRVI 235
L N++ +P I ++ P GG S AM I + + + + G V+
Sbjct: 161 LAGYGE-VFQRNIMASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVV 219
Query: 236 EQTVREKLPDGFQRSEYLVEHGMIDRIVHRHDIPEVVS 273
+ E++ + E ++
Sbjct: 220 KTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALA 257