HHsearch alignment for GI: 254780821 and conserved domain: COG0773
>COG0773 MurC UDP-N-acetylmuramate-alanine ligase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=1.2e-38 Score=257.96 Aligned_cols=342 Identities=21% Similarity=0.241 Sum_probs=228.8
Q ss_pred HHHHHHHHHCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCHHHHH
Q ss_conf 99999998729958835983999458984799999999999978935141378411012008988847787155889999
Q gi|254780821|r 7 LKMGYLLEDLGRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVEDVELL 86 (429)
Q Consensus 7 ~r~~~ll~~lg~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~~~~~ 86 (429)
T Consensus 95 ~r~e~L~elm~----~-~~~iaVaGTHGKTTTTsmla~vl~~~gldPtf-------------~iGG~-----~-~----- 145 (459)
T COG0773 95 SRAEMLAELMR----F-RTSIAVAGTHGKTTTTSMLAWVLEAAGLDPTF-------------LIGGI-----L-K----- 145 (459)
T ss_pred CHHHHHHHHHH----C-CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEE-------------EECCC-----C-C-----
T ss_conf 28999999970----7-71699947887540899999999867999879-------------97774-----4-5-----
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCHHHHH
Q ss_conf 99999863047767795789999999874114462477764447567641356775158986025000000278523445
Q gi|254780821|r 87 DVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLGGSLDATNIIEKVAVSVITSISLDHEKILGNTVSAIA 166 (429)
Q Consensus 87 ~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlGGr~DaTnvi~~~~vavITnI~~DHle~LG~tle~Ia 166 (429)
T Consensus 146 -------~~g~na~~----------------g~~~~fV~EAD---EsD~sFl~~~P~~aIvTNid~DH~D~y~-~~~~i~ 198 (459)
T COG0773 146 -------NFGTNARL----------------GSGDYFVAEAD---ESDSSFLHYNPRVAIVTNIEFDHLDYYG-DLEAIK 198 (459)
T ss_pred -------CCCCCCCC----------------CCCCEEEEEEC---CCCCCCCCCCCCEEEEECCCCCCHHHHC-CHHHHH
T ss_conf -------57765545----------------88864999951---5416502488978998078834001218-999999
Q ss_pred H--HHH-HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC----CCCCC-----CCCEEEEEECCCCCCCCCC
Q ss_conf 6--665-3113798331544471789889999862105665235763----21012-----5852444310333344444
Q gi|254780821|r 167 K--DKS-GIIKPGCPVVIGHQVYDEVREILVSKAEKMGCPYNVYGDD----FYAFE-----KNKCLVYQDKISQTNLTVL 234 (429)
Q Consensus 167 ~--eKa-~I~k~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~l 234 (429)
T Consensus 199 ~~F~~f~~~vp~~G~~v~~~d-d~~l~~l~~~~---~~~~v~tyG~~~~ad~~a~ni~~~~~~~~F~V~~~g~~~~~~~l 274 (459)
T COG0773 199 QAFHHFVRNVPFYGRAVVCGD-DPNLRELLSRG---CWSPVVTYGFDDEADWRAENIRQDGSGTTFDVLFRGEELGEVKL 274 (459)
T ss_pred HHHHHHHHHCCCCCEEEEECC-CHHHHHHHHCC---CCCCEEEECCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEE
T ss_conf 999999983886655999788-88899987222---58737942478767289997687066427999986855679997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC-CCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf 4322221111146999987532000011001122223366-530354228754445787459993363215799888654
Q gi|254780821|r 235 GLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQWF-GRLQKITEGPLLNKLPDHSEVWIDGGHNPNAGLVVSKEI 313 (429)
Q Consensus 235 ~l~G~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~~p-GR~e~i~~~~~~~~~~~~~~viiD~AHNp~s~~~l~~~l 313 (429)
T Consensus 275 ~~pG~HNvlNAlaaia~a~~~Gi--~~~~i~~aL~~F~GvkRRfe~~g~~-------~~~~viDDYaHHPtEI~aTL~aa 345 (459)
T COG0773 275 PLPGRHNVLNALAAIAVARELGI--DPEAIAEALASFQGVKRRFELKGEV-------NGVTVIDDYAHHPTEIKATLAAA 345 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHCCCCCEEEEEEEEE-------CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 26762268889999999998499--9899999997388964136886468-------87899856888979999999999
Q ss_pred HHHCCCCCCCEEEEEC---CCCCCC-HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCH
Q ss_conf 3311477771243113---467989-899999888638889998422889984212789899999998549978996998
Q gi|254780821|r 314 SKLKGSSNKPFYLVIG---MVEGKK-YGRYLEAFVELSPIVLSVSLICRGRERQSISITPKVLMQEAKKLGFQAMACSSM 389 (429)
Q Consensus 314 ~~l~~~~~~~i~~I~G---~~~dKd-~~~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 389 (429)
T Consensus 346 R~~~~~-~~rIvaifQPHrySRt~~~~~dF~~~l-~~AD~v~l~~VY~A~e~~~~g~~~~~~l~~~i~~~~~~~--~~~~ 421 (459)
T COG0773 346 RQKVPG-GKRIVAVFQPHRYSRTRDLLDDFAKAL-SDADEVILLDVYAAGEEPIEGDVSSEDLAEKIRQPGHVD--VPDL 421 (459)
T ss_pred HHHCCC-CCEEEEEECCCCHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC--CCCH
T ss_conf 976588-866999977873175899999999888-519999996233357888767753999999851377014--7888
Q ss_pred HHHHHHHHHHCCCCCCCEEEEE--CCH-HHHHHHHHH
Q ss_conf 9999999986035886799994--977-999999998
Q gi|254780821|r 390 IEALSRVRKINEELPPPLILIA--GSL-YLAGEALRE 423 (429)
Q Consensus 390 ~eAi~~a~~~~~~~~~d~VLV~--GS~-ylvge~l~~ 423 (429)
T Consensus 422 ~~~~~~l~~~--~~~gD~il~mGAGdi~~~~~~~~~~ 456 (459)
T COG0773 422 DDLVELLAKV--AQPGDVILFMGAGDIGKIARELLEA 456 (459)
T ss_pred HHHHHHHHHH--CCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 8999999964--7899989996688478899999987