HHsearch alignment for GI: 254780821 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=97.37 E-value=0.0012 Score=41.70 Aligned_cols=152 Identities=20% Similarity=0.217 Sum_probs=82.0
Q ss_pred HHHHHHHHHC-CCHHHHCCCEEEEECCC--CHHHHHHHHHHHHHHCCCCEEEE----ECCCCCEEEEEEEECCCCCCCEE
Q ss_conf 9999999872-99588359839994589--84799999999999978935141----37841101200898884778715
Q gi|254780821|r 7 LKMGYLLEDL-GRPQDRLPPVIHIGGTN--GKGSVASFSQRLLETSGLSVHVH----TSPHLIRWNERFRLGVKGGRGRL 79 (429)
Q Consensus 7 ~r~~~ll~~l-g~P~~~~~~vI~VtGTn--GKttt~~~i~~il~~~g~k~g~~----tSPhl~~~~Eri~i~~~~~~g~~ 79 (429)
T Consensus 33 ~~~~~ll~~l~~~~g~a--~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~--------------sgGai 96 (325)
T PRK09435 33 ALAQELLDALLPHTGNA--LRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTR--------------TGGSI 96 (325)
T ss_pred HHHHHHHHHHHHCCCCC--EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC--------------CCCCH
T ss_conf 99999999863017982--599742799986889999999999967985899997899998--------------88610
Q ss_pred CCHHH-HHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH-HHH-HHHHHHCCCCCCCEEEEEECCC
Q ss_conf 58899-999999----9863047767795789999999874114462477764-447-5676413567751589860250
Q gi|254780821|r 80 VEDVE-LLDVFR----RVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEV-GLG-GSLDATNIIEKVAVSVITSISL 152 (429)
Q Consensus 80 i~~~~-~~~~~~----~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~-GlG-Gr~DaTnvi~~~~vavITnI~~ 152 (429)
T Consensus 97 LGDr~Rm~~~~~~~~~fiRs~~srg~lgg~~~~~~~~~~~~~a~g~d~i~iETvGvGQ~e~~v~~~~---d~~~~~-~~p 172 (325)
T PRK09435 97 LGDKTRMERLSRHPNAFIRPSPSSGTLGGVARKTRETMLLCEAAGFDVILVETVGVGQSETAVAGMV---DFFLLL-QLP 172 (325)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC---CEEEEE-ECC
T ss_conf 1038888761479984884067788867733549999999997799989997067771488998742---668888-358
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 000002785234456665311379833154447
Q gi|254780821|r 153 DHEKILGNTVSAIAKDKSGIIKPGCPVVIGHQV 185 (429)
Q Consensus 153 DHle~LG~tle~Ia~eKa~I~k~~~~~v~~~~~ 185 (429)
T Consensus 173 ~----~GD~~Q---~~K~GImEiaDi~vVNKaD 198 (325)
T PRK09435 173 G----AGDELQ---GIKKGIMELADLIVINKAD 198 (325)
T ss_pred C----CCCHHH---HHHHHHHHHCCEEEEECCC
T ss_conf 8----760889---9886577504268997767