HHsearch alignment for GI: 254780821 and conserved domain: PRK10773
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00 E-value=2.8e-45 Score=299.16 Aligned_cols=344 Identities=20% Similarity=0.216 Sum_probs=218.9
Q ss_pred CCCHHHHHHHHHHCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCH
Q ss_conf 78889999999872995883598399945898479999999999997893514137841101200898884778715588
Q gi|254780821|r 3 ADSLLKMGYLLEDLGRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVED 82 (429)
Q Consensus 3 ~~~l~r~~~ll~~lg~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~ 82 (429)
T Consensus 81 ~d~~~al~~la~~~-~~~~~~-~vIgITGSnGKTTtk~~i~~iL~~~g~~~~t~gn-----------~n~~--iG~p~-- 143 (452)
T PRK10773 81 KDTRLAFGQLAAWV-RQQVPA-RVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGN-----------LNND--IGVPL-- 143 (452)
T ss_pred CCHHHHHHHHHHHH-HHCCCC-CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC-----------CCCC--CCCCH--
T ss_conf 99999999999987-515997-5899991699625999999999972884124565-----------2688--78660--
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HHHHHHCCCCCCCEEEEEECCCHHCCCCCC
Q ss_conf 999999999863047767795789999999874114462477764447--567641356775158986025000000278
Q gi|254780821|r 83 VELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLG--GSLDATNIIEKVAVSVITSISLDHEKILGN 160 (429)
Q Consensus 83 ~~~~~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlG--Gr~DaTnvi~~~~vavITnI~~DHle~LG~ 160 (429)
T Consensus 144 -------------------tl~~----------~~~~~~~~v~E~g~~~~gei~~~~~~~~pdiaviTNI~~dHLd~~g- 193 (452)
T PRK10773 144 -------------------TLLR----------LTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFG- 193 (452)
T ss_pred -------------------HHHC----------CCCHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCC-
T ss_conf -------------------7650----------7921335785323798535676640026675999842477654057-
Q ss_pred CHHHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC---CCCCC-----CCCCCCEEEEEECCCCC
Q ss_conf 52344566653113---798331544471789889999862105665235---76321-----01258524443103333
Q gi|254780821|r 161 TVSAIAKDKSGIIK---PGCPVVIGHQVYDEVREILVSKAEKMGCPYNVY---GDDFY-----AFEKNKCLVYQDKISQT 229 (429)
Q Consensus 161 tle~Ia~eKa~I~k---~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~ 229 (429)
T Consensus 194 s~e~~~~aK~~Lf~~l~~~g~~IlN~Dd-~~~~~-~~~~~~~~~v~~~~~~~~~~d~~~~~i~~~~~g~~f~l~~~~~~- 270 (452)
T PRK10773 194 SLAGVAKAKGEIFTGLPENGIAIMNADN-NDWLN-WQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLHTPTGS- 270 (452)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEEECCC-HHHHH-HHHHHCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCE-
T ss_conf 6999999999998178879899997987-67999-99983798289980687776189999999189418999967951-
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCEEEEE-CCCCHHHHH
Q ss_conf 4444443222211111469999875320000110011222233-66530354228754445787459993-363215799
Q gi|254780821|r 230 NLTVLGLVGEHQYINAATAICAVQMAGFTLEKECINAALQSVQ-WFGRLQKITEGPLLNKLPDHSEVWID-GGHNPNAGL 307 (429)
Q Consensus 230 ~~~~l~l~G~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~-~pGR~e~i~~~~~~~~~~~~~~viiD-~AHNp~s~~ 307 (429)
T Consensus 271 ~~v~l~l~G~hnv~NalaAiava~~lG~~~--~~i~~~L~~~~~v~GRme~i~~~-------~g~~iIdDsYNAnP~Sm~ 341 (452)
T PRK10773 271 VDVLLPLPGRHNIANALAAAALAMSVGATL--DAVKAGLANLKAVPGRLFPIQLA-------ENQLLLDDSYNANVGSMT 341 (452)
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHCCCCCCCEEEEECC-------CEEEEEEECCCCCHHHHH
T ss_conf 899970761768998999999999859999--99999997289986740799738-------708999742569979999
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCCCC--CC----HHHHHHHHHHH-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 88865433114777712431134679--89----89999988863-8889998422889984212789899999998549
Q gi|254780821|r 308 VVSKEISKLKGSSNKPFYLVIGMVEG--KK----YGRYLEAFVEL-SPIVLSVSLICRGRERQSISITPKVLMQEAKKLG 380 (429)
Q Consensus 308 ~l~~~l~~l~~~~~~~i~~I~G~~~d--Kd----~~~~l~~l~~~-~d~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 380 (429)
T Consensus 342 aal~~l~~~~---~-~ki~VLGdM~ELG~~s~~~H~~v~~~~~~~~id~v~~vG------------~~~~~~~~----~~ 401 (452)
T PRK10773 342 AAVQVLAEMP---G-YRVLVVGDMAELGAESEACHRQVGEAAKAAGIDRVLSVG------------KLSQAIST----AS 401 (452)
T ss_pred HHHHHHHHCC---C-CEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEC------------HHHHHHHH----HC
T ss_conf 9999997577---9-769998773772857899999999999976999999988------------78999987----41
Q ss_pred CCEEEECCHHHHHHHHHHHCCCCCCCEEEEECC----HHHHHHHHHHCC
Q ss_conf 978996998999999998603588679999497----799999999879
Q gi|254780821|r 381 FQAMACSSMIEALSRVRKINEELPPPLILIAGS----LYLAGEALRENG 425 (429)
Q Consensus 381 ~~~~~~~~~~eAi~~a~~~~~~~~~d~VLV~GS----~ylvge~l~~~g 425 (429)
T Consensus 402 ~~~~~f~~~~~~~~~l~~~l~~~~~~~vLvKGSr~~~le~iv~~L~~~~ 450 (452)
T PRK10773 402 GVGEHFADKTALIARLKALLAEQQVITILVKGSRSAAMEEVVRALQEKG 450 (452)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 8763369999999999988744998489998575114999999999625