HHsearch alignment for GI: 254780821 and conserved domain: PRK13869
>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=96.77 E-value=0.0029 Score=39.22 Aligned_cols=50 Identities=24% Similarity=0.387 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHC--C----------CHHHHCCCEEEEE---CCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 889999999872--9----------9588359839994---5898479999999999997893514
Q gi|254780821|r 5 SLLKMGYLLEDL--G----------RPQDRLPPVIHIG---GTNGKGSVASFSQRLLETSGLSVHV 55 (429)
Q Consensus 5 ~l~r~~~ll~~l--g----------~P~~~~~~vI~Vt---GTnGKttt~~~i~~il~~~g~k~g~ 55 (429)
T Consensus 91 ~i~~lR~~l~~~~~~~~~~~~~p~R~~~~~~-kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLl 155 (405)
T PRK13869 91 QINEIRGMLAGSTRGRESIDFVPHRRGSEHL-QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLA 155 (405)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999997405555543458999999998-2899978887765999999999999977998899