HHsearch alignment for GI: 254780821 and conserved domain: PRK13869

>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=96.77  E-value=0.0029  Score=39.22  Aligned_cols=50  Identities=24%  Similarity=0.387  Sum_probs=37.7

Q ss_pred             CHHHHHHHHHHC--C----------CHHHHCCCEEEEE---CCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             889999999872--9----------9588359839994---5898479999999999997893514
Q gi|254780821|r    5 SLLKMGYLLEDL--G----------RPQDRLPPVIHIG---GTNGKGSVASFSQRLLETSGLSVHV   55 (429)
Q Consensus         5 ~l~r~~~ll~~l--g----------~P~~~~~~vI~Vt---GTnGKttt~~~i~~il~~~g~k~g~   55 (429)
T Consensus        91 ~i~~lR~~l~~~~~~~~~~~~~p~R~~~~~~-kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLl  155 (405)
T PRK13869         91 QINEIRGMLAGSTRGRESIDFVPHRRGSEHL-QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLA  155 (405)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             9999999997405555543458999999998-2899978887765999999999999977998899