HHsearch alignment for GI: 254780821 and conserved domain: TIGR02068
>TIGR02068 cya_phycin_syn cyanophycin synthetase; InterPro: IPR011810 Cyanophycin is an insoluble storage polymer for carbon, nitrogen, and energy, found in most Cyanobacteria. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. The polymer is made by this enzyme, cyanophycin synthetase, and degraded by cyanophycinase. Heterologously expressed cyanophycin synthetase in Escherichia coli produces a closely related, water-soluble polymer with some Arg replaced by Lys. It is unclear whether enzymes that produce soluble cyanophycin-like polymers in vivo in non-Cyanobacterial species should be designated as cyanophycin synthetase itself or as a related enzyme. Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions .; GO: 0005524 ATP binding, 0016874 ligase activity, 0009059 macromolecule biosynthetic process.
Probab=100.00 E-value=0 Score=314.74 Aligned_cols=348 Identities=22% Similarity=0.235 Sum_probs=240.8
Q ss_pred HHHHHHC---CCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEECCHHHHH
Q ss_conf 9999872---9958835983999458984799999999999978935141378411012008988847787155889999
Q gi|254780821|r 10 GYLLEDL---GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVEDVELL 86 (429)
Q Consensus 10 ~~ll~~l---g~P~~~~~~vI~VtGTnGKttt~~~i~~il~~~g~k~g~~tSPhl~~~~Eri~i~~~~~~g~~i~~~~~~ 86 (429)
T Consensus 473 ~Ai~d~LFP~~~~-grI-PiV~vTGTNGKTt~~RL~Ahil~~~G~~vG~T~t------------D-----G~Yi~~~~-- 531 (876)
T TIGR02068 473 KAIVDMLFPEEDD-GRI-PIVAVTGTNGKTTTTRLVAHILKQTGKVVGMTTT------------D-----GVYIGKKL-- 531 (876)
T ss_pred HHHHHHCCCCCCC-CCE-EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC------------C-----CEEECCEE--
T ss_conf 2687522888789-834-4888726898355788999999856982764203------------7-----67755766--
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CHHCCCCC-CCHHH
Q ss_conf 99999863047767795789999999874114462477764447567641356775158986025-00000027-85234
Q gi|254780821|r 87 DVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLGGSLDATNIIEKVAVSVITSIS-LDHEKILG-NTVSA 164 (429)
Q Consensus 87 ~~~~~i~~~~~~~~~t~FE~lt~~a~~~f~~~~~d~~vlE~GlGGr~DaTnvi~~~~vavITnI~-~DHle~LG-~tle~ 164 (429)
T Consensus 532 -----v~---~GDntGP~-----SAr~~L~d~~VdaAVLEtarGGiLR~GLafD~c~VGvVtNi~~~DHLG~~dInt~e~ 598 (876)
T TIGR02068 532 -----VE---KGDNTGPK-----SARRILADPTVDAAVLETARGGILREGLAFDRCDVGVVTNIADGDHLGLGDINTIED 598 (876)
T ss_pred -----EE---CCCCCCHH-----HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf -----62---47898715-----730122788801899862787220665010321416898337766357886004788
Q ss_pred HHHHHHHH---CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC------CCCCCEEEEEECC---------
Q ss_conf 45666531---13798331544471789889999862105665235763210------1258524443103---------
Q gi|254780821|r 165 IAKDKSGI---IKPGCPVVIGHQVYDEVREILVSKAEKMGCPYNVYGDDFYA------FEKNKCLVYQDKI--------- 226 (429)
Q Consensus 165 Ia~eKa~I---~k~~~~~v~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--------- 226 (429)
T Consensus 599 La~Vk~vv~e~V~pDG~AVLNA~D-P~v----a~mA~~~~G~i~YF~~~~~~~~~~~H~~~G~~avy~~~G~ivia~G~~ 673 (876)
T TIGR02068 599 LADVKRVVVEVVKPDGYAVLNADD-PMV----AAMAEKCKGKIAYFSMDPNNPTVAKHIAKGGRAVYYENGYIVIAKGGA 673 (876)
T ss_pred HHHHEEEEEEEECCCCCEEECCCC-CHH----HHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCEEEEEECCC
T ss_conf 875101267888589827864788-557----999842896189862186258999998559899998678799974783
Q ss_pred ----CCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC-----CCCCEEEEECCCCCCCCCCCCEE
Q ss_conf ----333444444322--2211111469999875320000110011222233-----66530354228754445787459
Q gi|254780821|r 227 ----SQTNLTVLGLVG--EHQYINAATAICAVQMAGFTLEKECINAALQSVQ-----WFGRLQKITEGPLLNKLPDHSEV 295 (429)
Q Consensus 227 ----~~~~~~~l~l~G--~hn~~Na~~Aiaa~~~lg~~i~~~~I~~gL~~~~-----~pGR~e~i~~~~~~~~~~~~~~v 295 (429)
T Consensus 674 ~~~~~~~~~iPlT~GG~~~F~ieN~LAA~aAA~~~~v~i--e~Ir~G~~tF~~d~~~~PGrfnLFn~--------~~~~~ 743 (876)
T TIGR02068 674 EVAIARIAEIPLTMGGRVAFQIENALAAVAAAWALGVDI--ELIRAGIRTFKADAAQAPGRFNLFNL--------GGAHV 743 (876)
T ss_pred CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHCCCHHHCCCCEEEEEEC--------CCCEE
T ss_conf 226789972886757715788889999999985348989--99998987330101068950322225--------88289
Q ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH---HHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 993363215799888654331147777124311346798989---99998886388899984228899842127898999
Q gi|254780821|r 296 WIDGGHNPNAGLVVSKEISKLKGSSNKPFYLVIGMVEGKKYG---RYLEAFVELSPIVLSVSLICRGRERQSISITPKVL 372 (429)
Q Consensus 296 iiD~AHNp~s~~~l~~~l~~l~~~~~~~i~~I~G~~~dKd~~---~~l~~l~~~~d~i~~~~~~~~~~~~~~~~~~~~~l 372 (429)
T Consensus 744 lvDY~HNp~~~~av~~a~~~~~A---~rr~gV~ggpGDR~De~l~~~G~~~g~~FD~i~~keD~~~r-GkR~~G~a~~Ll 819 (876)
T TIGR02068 744 LVDYGHNPAAIEAVVEAIRNLPA---RRRIGVIGGPGDRRDEDLVKLGEILGGAFDQIILKEDDDLR-GKRARGEAAALL 819 (876)
T ss_pred EEECCCCHHHHHHHHHHHHHCCC---CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCCCHHHHHH
T ss_conf 99657797899999999961787---84789980787786588999999975406879996274535-788873589999
Q ss_pred HHHHHHCCCCEE---EECCHHHHHHHHHHHCCCCCCCEEEEEC
Q ss_conf 999985499789---9699899999999860358867999949
Q gi|254780821|r 373 MQEAKKLGFQAM---ACSSMIEALSRVRKINEELPPPLILIAG 412 (429)
Q Consensus 373 ~~~~~~~~~~~~---~~~~~~eAi~~a~~~~~~~~~d~VLV~G 412 (429)
T Consensus 820 ~~G~~~~~~~~~~i~~i~de~~Ai~~~L~~~--~~GdL~vi~~ 860 (876)
T TIGR02068 820 RQGLIQAAMRKAAIEEILDETEAIKAALDSL--EAGDLVVILP 860 (876)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEEC
T ss_conf 9635305776567999988999999998421--4688699970