HHsearch alignment for GI: 254780821 and conserved domain: TIGR02397

>TIGR02397 dnaX_nterm DNA polymerase III, subunits gamma and tau; InterPro: IPR012763 This entry represents the well-conserved first N-terminal domain of DnaX, approx. 365 aa. The full-length product of the dnaX gene in Escherichia coli encodes the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the extreme thermophile Thermus thermophilis.; GO: 0003887 DNA-directed DNA polymerase activity, 0005524 ATP binding, 0006260 DNA replication, 0009360 DNA polymerase III complex.
Probab=91.60  E-value=0.43  Score=25.84  Aligned_cols=28  Identities=21%  Similarity=0.218  Sum_probs=16.6

Q ss_pred             CEEEEECCC--CHHHHHHHHHHHHHHCCCCE
Q ss_conf             839994589--84799999999999978935
Q gi|254780821|r   25 PVIHIGGTN--GKGSVASFSQRLLETSGLSV   53 (429)
Q Consensus        25 ~vI~VtGTn--GKttt~~~i~~il~~~g~k~   53 (429)
T Consensus        37 HAYLF~GpRGtGKTS~ARIfAKaLNC~-~~~   66 (363)
T TIGR02397        37 HAYLFSGPRGTGKTSIARIFAKALNCQ-GPD   66 (363)
T ss_pred             CEEEECCCCCCCHHHHHHHHHHHHCCC-CCC
T ss_conf             234502859976355899999986588-787