RPSBLAST alignment for GI: 254780821 and conserved domain: pfam08245
>gnl|CDD|149357 pfam08245, Mur_ligase_M, Mur ligase middle domain. Length = 188
Score = 38.4 bits (90), Expect = 0.003
Identities = 49/237 (20%), Positives = 74/237 (31%), Gaps = 62/237 (26%)
Query: 29 IGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGRGRLVEDVELLDV 88
I GTNGK + LL +G
Sbjct: 1 ITGTNGKTTTTELIAALLSAAG-------------------------------------- 22
Query: 89 FRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLGGSLDA-TNIIEKVAVSVI 147
V + N T + + L L + AD A++E+ G + + K ++VI
Sbjct: 23 ----GVVGTGGN-TNNAIGLPLLLALMERKGADYAVLELSSFGLGEGRLEGLAKPDIAVI 77
Query: 148 TSISLDHEKILGNTVSAIAKDKSGI---IKPGCPVVIGHQVYDEVREILVSKAEKMGCPY 204
T+IS DH G T+ A K+ I + VI D+ L + + G
Sbjct: 78 TNISPDHLDYHG-TMENYAAAKAEIFEGLPEDGIAVINA---DD--PELAKRLKNAGAKV 131
Query: 205 NVYG-DDFYAFEKNKCLVYQDKISQTNLTV--------LGLVGEHQYINAATAICAV 252
+G ++ V + TV L L G H NA A+ A
Sbjct: 132 ITFGLENEADDRAANIYVSSEGGKIVLFTVPGGELEISLPLPGRHNVYNALAALAAA 188