RPSBLAST alignment of GI: 254780821 and protein with PDBid: 2wtz
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, cytoplasm; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} Length = 535
Score = 88.5 bits (218), Expect = 3e-18
Identities = 63/410 (15%), Positives = 123/410 (30%), Gaps = 61/410 (14%)
Query: 17 GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGR 76
G P +RL VI I GT+GK + + L +G + + +
Sbjct: 140 GHPSERLT-VIGITGTSGKTTTTYLVEAGLRAAGRVAGLIGTIGIRVGGADLPSA----- 193
Query: 77 GRLVEDVELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLGGSLDAT 136
T ++ L + D ++EV
Sbjct: 194 -----------------------LTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGR 230
Query: 137 NIIEKVAVSVITSISLDHEKILGNTVS---AIAKDKSGIIKPGCPVVIGHQVYDEVREIL 193
+ AV T++S DH + A A + D R +
Sbjct: 231 VDGTRFAVGAFTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMA 290
Query: 194 VSKAEKMGCPYNVYGDDFYA------FEKNKCLVYQDKISQTNLTVLGLVGEHQYINAAT 247
A+ + + A + D + + L G + N
Sbjct: 291 ARAADAITVSAADRPAHWRATDVAPTDAGGQQFTAIDPAGVGHHIGIRLPGRYNVANCLV 350
Query: 248 AICAVQMAGFTLEKECINAALQSVQWFGRLQKITEGPLLNKLPDHSEVWIDGGHNPNAGL 307
A+ + G + E+ L+ ++ GRL++I +D H P A
Sbjct: 351 ALAILDTVGVSPEQ--AVPGLREIRVPGRLEQIDR-------GQGFLALVDYAHKPEALR 401
Query: 308 VVSKEISKLKGSSNKPFYLVIGMVEGKKYGRYLEAF---VELSPIVLSVSLICRGRERQS 364
V ++ ++ +V G + G+ +L+ +V+ R + +
Sbjct: 402 SVLTTLA----HPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTA 457
Query: 365 ISITPKVLMQEAKKLGF--QAMACSSMIEALSRVRKINEELPPPLILIAG 412
I + ++ A ++G Q + + +A+ P ++LIAG
Sbjct: 458 IR---REILAGAAEVGGDAQVVEIADRRDAIRHAVAWAR--PGDVVLIAG 502