RPSBLAST alignment of GI: 254780821 and protein with PDBid: 2wtz

>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, cytoplasm; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} Length = 535
 Score = 88.5 bits (218), Expect = 3e-18
 Identities = 63/410 (15%), Positives = 123/410 (30%), Gaps = 61/410 (14%)

Query: 17  GRPQDRLPPVIHIGGTNGKGSVASFSQRLLETSGLSVHVHTSPHLIRWNERFRLGVKGGR 76
           G P +RL  VI I GT+GK +     +  L  +G    +  +  +               
Sbjct: 140 GHPSERLT-VIGITGTSGKTTTTYLVEAGLRAAGRVAGLIGTIGIRVGGADLPSA----- 193

Query: 77  GRLVEDVELLDVFRRVRRVKSAQNLTIFELSIATALVLFSKYPADCAIIEVGLGGSLDAT 136
                                    T    ++   L    +   D  ++EV         
Sbjct: 194 -----------------------LTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGR 230

Query: 137 NIIEKVAVSVITSISLDHEKILGNTVS---AIAKDKSGIIKPGCPVVIGHQVYDEVREIL 193
               + AV   T++S DH     +      A A              +     D  R + 
Sbjct: 231 VDGTRFAVGAFTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMA 290

Query: 194 VSKAEKMGCPYNVYGDDFYA------FEKNKCLVYQDKISQTNLTVLGLVGEHQYINAAT 247
              A+ +          + A          +     D     +   + L G +   N   
Sbjct: 291 ARAADAITVSAADRPAHWRATDVAPTDAGGQQFTAIDPAGVGHHIGIRLPGRYNVANCLV 350

Query: 248 AICAVQMAGFTLEKECINAALQSVQWFGRLQKITEGPLLNKLPDHSEVWIDGGHNPNAGL 307
           A+  +   G + E+      L+ ++  GRL++I                +D  H P A  
Sbjct: 351 ALAILDTVGVSPEQ--AVPGLREIRVPGRLEQIDR-------GQGFLALVDYAHKPEALR 401

Query: 308 VVSKEISKLKGSSNKPFYLVIGMVEGKKYGRYLEAF---VELSPIVLSVSLICRGRERQS 364
            V   ++      ++   +V G    +  G+         +L+ +V+      R  +  +
Sbjct: 402 SVLTTLA----HPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTA 457

Query: 365 ISITPKVLMQEAKKLGF--QAMACSSMIEALSRVRKINEELPPPLILIAG 412
           I    + ++  A ++G   Q +  +   +A+          P  ++LIAG
Sbjct: 458 IR---REILAGAAEVGGDAQVVEIADRRDAIRHAVAWAR--PGDVVLIAG 502